Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AL160236.1-201ENST00000556317 195 ntBASIC1.21□□□□□ -2.22
LRRTM1Q86UE6 AC068338.1-201ENST00000565567 176 ntBASIC1.21□□□□□ -2.22
LRRTM1Q86UE6 FAM106DP-201ENST00000586416 501 ntBASIC1.21□□□□□ -2.22
LRRTM1Q86UE6 AC015726.2-201ENST00000620112 122 ntBASIC1.21□□□□□ -2.22
LRRTM1Q86UE6 AL157777.2-201ENST00000258070 137 ntBASIC1.2□□□□□ -2.22
LRRTM1Q86UE6 Y_RNA.251-201ENST00000364551 99 ntBASIC1.2□□□□□ -2.22
LRRTM1Q86UE6 RNA5SP190-201ENST00000365222 118 ntBASIC1.2□□□□□ -2.22
LRRTM1Q86UE6 Y_RNA.488-201ENST00000384403 102 ntBASIC1.2□□□□□ -2.22
LRRTM1Q86UE6 Y_RNA.494-201ENST00000384432 111 ntBASIC1.2□□□□□ -2.22
LRRTM1Q86UE6 Y_RNA.547-201ENST00000384654 119 ntBASIC1.2□□□□□ -2.22
LRRTM1Q86UE6 MIR150-201ENST00000385048 84 ntBASIC1.2□□□□□ -2.22
LRRTM1Q86UE6 MIR758-201ENST00000390227 88 ntBASIC1.2□□□□□ -2.22
LRRTM1Q86UE6 MIR802-201ENST00000390235 94 ntBASIC1.2□□□□□ -2.22
LRRTM1Q86UE6 SNORD77.3-201ENST00000391113 65 ntBASIC1.2□□□□□ -2.22
LRRTM1Q86UE6 SNORA79-201ENST00000408376 140 ntBASIC1.2□□□□□ -2.22
LRRTM1Q86UE6 RPS27P16-201ENST00000425758 201 ntBASIC1.2□□□□□ -2.22
LRRTM1Q86UE6 HMGN2P32-201ENST00000444648 269 ntBASIC1.2□□□□□ -2.22
LRRTM1Q86UE6 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.2□□□□□ -2.22
LRRTM1Q86UE6 AC079140.2-201ENST00000506193 142 ntBASIC1.2□□□□□ -2.22
LRRTM1Q86UE6 SNORA31.24-201ENST00000517232 57 ntBASIC1.2□□□□□ -2.22
LRRTM1Q86UE6 AC112693.2-201ENST00000556538 232 ntBASIC1.2□□□□□ -2.22
LRRTM1Q86UE6 MIR3910-1-201ENST00000580936 111 ntBASIC1.2□□□□□ -2.22
LRRTM1Q86UE6 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
LRRTM1Q86UE6 Y_RNA.294-201ENST00000364916 102 ntBASIC1.19□□□□□ -2.22
LRRTM1Q86UE6 Y_RNA.497-201ENST00000384447 98 ntBASIC1.19□□□□□ -2.22
LRRTM1Q86UE6 Y_RNA.542-201ENST00000384641 111 ntBASIC1.19□□□□□ -2.22
LRRTM1Q86UE6 MIR653-201ENST00000385279 96 ntBASIC1.19□□□□□ -2.22
LRRTM1Q86UE6 SNORD28B-201ENST00000390993 75 ntBASIC1.19□□□□□ -2.22
LRRTM1Q86UE6 SNORA67.6-201ENST00000391093 99 ntBASIC1.19□□□□□ -2.22
LRRTM1Q86UE6 RNU6-257P-201ENST00000410238 98 ntBASIC1.19□□□□□ -2.22
LRRTM1Q86UE6 RNU6-938P-201ENST00000411285 103 ntBASIC1.19□□□□□ -2.22
LRRTM1Q86UE6 AC027119.1-201ENST00000440877 241 ntBASIC1.19□□□□□ -2.22
LRRTM1Q86UE6 SNRPGP13-201ENST00000442212 177 ntBASIC1.19□□□□□ -2.22
LRRTM1Q86UE6 RNU4-57P-201ENST00000515980 135 ntBASIC1.19□□□□□ -2.22
LRRTM1Q86UE6 Y_RNA.686-201ENST00000516548 134 ntBASIC1.19□□□□□ -2.22
LRRTM1Q86UE6 SNORD36C-201ENST00000516733 66 ntBASIC1.19□□□□□ -2.22
LRRTM1Q86UE6 RNU7-181P-201ENST00000517234 74 ntBASIC1.19□□□□□ -2.22
LRRTM1Q86UE6 RNU2-60P-201ENST00000517290 128 ntBASIC1.19□□□□□ -2.22
LRRTM1Q86UE6 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.19□□□□□ -2.22
LRRTM1Q86UE6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
LRRTM1Q86UE6 SNORD53B-201ENST00000577887 78 ntBASIC1.19□□□□□ -2.22
LRRTM1Q86UE6 MIR548X2-201ENST00000579776 100 ntBASIC1.19□□□□□ -2.22
LRRTM1Q86UE6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.19□□□□□ -2.22
LRRTM1Q86UE6 MTND1P7-201ENST00000632801 297 ntBASIC1.19□□□□□ -2.22
LRRTM1Q86UE6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.18□□□□□ -2.22
LRRTM1Q86UE6 RNU6-888P-201ENST00000363010 101 ntBASIC1.18□□□□□ -2.22
LRRTM1Q86UE6 RNU6-704P-201ENST00000364162 103 ntBASIC1.18□□□□□ -2.22
LRRTM1Q86UE6 RNU6-60P-201ENST00000364792 103 ntBASIC1.18□□□□□ -2.22
LRRTM1Q86UE6 RNU6-597P-201ENST00000365620 102 ntBASIC1.18□□□□□ -2.22
LRRTM1Q86UE6 Y_RNA.420-201ENST00000384043 110 ntBASIC1.18□□□□□ -2.22
LRRTM1Q86UE6 Y_RNA.568-201ENST00000384742 113 ntBASIC1.18□□□□□ -2.22
LRRTM1Q86UE6 MIR452-201ENST00000385020 85 ntBASIC1.18□□□□□ -2.22
LRRTM1Q86UE6 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.18□□□□□ -2.22
LRRTM1Q86UE6 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.18□□□□□ -2.22
LRRTM1Q86UE6 AC245517.4-201ENST00000448601 281 ntBASIC1.18□□□□□ -2.22
LRRTM1Q86UE6 RPS29P29-201ENST00000456396 171 ntBASIC1.18□□□□□ -2.22
LRRTM1Q86UE6 snoU13.23-201ENST00000458863 104 ntBASIC1.18□□□□□ -2.22
LRRTM1Q86UE6 RNA5SP445-201ENST00000515889 115 ntBASIC1.18□□□□□ -2.22
LRRTM1Q86UE6 RNU6-504P-201ENST00000516568 104 ntBASIC1.18□□□□□ -2.22
LRRTM1Q86UE6 SNORA18.7-201ENST00000516910 131 ntBASIC1.18□□□□□ -2.22
LRRTM1Q86UE6 RNU6-902P-201ENST00000517212 91 ntBASIC1.18□□□□□ -2.22
LRRTM1Q86UE6 MIR4662B-201ENST00000579498 81 ntBASIC1.18□□□□□ -2.22
LRRTM1Q86UE6 MIR4524B-201ENST00000581569 115 ntBASIC1.18□□□□□ -2.22
LRRTM1Q86UE6 AP001485.1-201ENST00000604799 199 ntBASIC1.18□□□□□ -2.22
LRRTM1Q86UE6 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.18□□□□□ -2.22
LRRTM1Q86UE6 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.18□□□□□ -2.22
LRRTM1Q86UE6 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.17□□□□□ -2.22
LRRTM1Q86UE6 SNORA2.2-201ENST00000365473 135 ntBASIC1.17□□□□□ -2.22
LRRTM1Q86UE6 MIR570-201ENST00000384917 97 ntBASIC1.17□□□□□ -2.22
LRRTM1Q86UE6 MIR136-201ENST00000385207 82 ntBASIC1.17□□□□□ -2.22
LRRTM1Q86UE6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
LRRTM1Q86UE6 MIR764-201ENST00000390811 85 ntBASIC1.17□□□□□ -2.22
LRRTM1Q86UE6 SNORA75.5-201ENST00000391291 81 ntBASIC1.17□□□□□ -2.22
LRRTM1Q86UE6 MTND4LP9-201ENST00000427694 174 ntBASIC1.17□□□□□ -2.22
LRRTM1Q86UE6 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.17□□□□□ -2.22
LRRTM1Q86UE6 snoU13.25-201ENST00000458945 104 ntBASIC1.17□□□□□ -2.22
LRRTM1Q86UE6 SNORD13-201ENST00000459299 104 ntBASIC1.17□□□□□ -2.22
LRRTM1Q86UE6 SNORD123-201ENST00000459473 70 ntBASIC1.17□□□□□ -2.22
LRRTM1Q86UE6 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.17□□□□□ -2.22
LRRTM1Q86UE6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.17□□□□□ -2.22
LRRTM1Q86UE6 AC090049.2-201ENST00000550377 109 ntBASIC1.17□□□□□ -2.22
LRRTM1Q86UE6 AC015712.3-201ENST00000559380 164 ntBASIC1.17□□□□□ -2.22
LRRTM1Q86UE6 MIR548AR-201ENST00000582191 57 ntBASIC1.17□□□□□ -2.22
LRRTM1Q86UE6 AL353997.5-201ENST00000618886 171 ntBASIC1.17□□□□□ -2.22
LRRTM1Q86UE6 U2.22-201ENST00000636441 106 ntBASIC1.17□□□□□ -2.22
LRRTM1Q86UE6 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.17□□□□□ -2.22
LRRTM1Q86UE6 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.17□□□□□ -2.22
LRRTM1Q86UE6 SNORD33-201ENST00000362761 85 ntBASIC1.16□□□□□ -2.22
LRRTM1Q86UE6 SNORD24-201ENST00000383884 75 ntBASIC1.16□□□□□ -2.22
LRRTM1Q86UE6 SNORD38C-201ENST00000384381 69 ntBASIC1.16□□□□□ -2.22
LRRTM1Q86UE6 SNORA19-201ENST00000384737 128 ntBASIC1.16□□□□□ -2.22
LRRTM1Q86UE6 MIR613-201ENST00000385248 95 ntBASIC1.16□□□□□ -2.22
LRRTM1Q86UE6 Y_RNA.586-201ENST00000391146 98 ntBASIC1.16□□□□□ -2.22
LRRTM1Q86UE6 RNU6-830P-201ENST00000516353 107 ntBASIC1.16□□□□□ -2.22
LRRTM1Q86UE6 RNU6-165P-201ENST00000517170 99 ntBASIC1.16□□□□□ -2.22
LRRTM1Q86UE6 MIR3937-201ENST00000580135 106 ntBASIC1.16□□□□□ -2.22
LRRTM1Q86UE6 AL645939.4-201ENST00000604495 135 ntBASIC1.16□□□□□ -2.22
LRRTM1Q86UE6 AC010332.2-201ENST00000613083 1904 ntBASIC1.16□□□□□ -2.22
LRRTM1Q86UE6 AL161722.3-201ENST00000605789 2983 ntBASIC1.16□□□□□ -2.22
LRRTM1Q86UE6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 274.5 ms