Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 RNY1P10-201ENST00000363268 113 ntBASIC1.41□□□□□ -2.18
SYNE3Q6ZMZ3 RNU6-1020P-201ENST00000363684 107 ntBASIC1.41□□□□□ -2.18
SYNE3Q6ZMZ3 RNU6-47P-201ENST00000383866 107 ntBASIC1.41□□□□□ -2.18
SYNE3Q6ZMZ3 Y_RNA.785-201ENST00000384290 109 ntBASIC1.41□□□□□ -2.18
SYNE3Q6ZMZ3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.41□□□□□ -2.18
SYNE3Q6ZMZ3 U8.17-201ENST00000391292 132 ntBASIC1.41□□□□□ -2.18
SYNE3Q6ZMZ3 Y_RNA.622-201ENST00000411091 108 ntBASIC1.41□□□□□ -2.18
SYNE3Q6ZMZ3 AC087499.4-201ENST00000448505 178 ntBASIC1.41□□□□□ -2.18
SYNE3Q6ZMZ3 AC090821.2-201ENST00000523552 176 ntBASIC1.41□□□□□ -2.18
SYNE3Q6ZMZ3 AP003716.2-201ENST00000528260 108 ntBASIC1.41□□□□□ -2.18
SYNE3Q6ZMZ3 MIR3192-201ENST00000584920 77 ntBASIC1.41□□□□□ -2.18
SYNE3Q6ZMZ3 MIR4781-201ENST00000585250 76 ntBASIC1.41□□□□□ -2.18
SYNE3Q6ZMZ3 AL359821.1-201ENST00000605519 182 ntBASIC1.41□□□□□ -2.18
SYNE3Q6ZMZ3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SYNE3Q6ZMZ3 SNORD115-28-201ENST00000363931 81 ntBASIC1.4□□□□□ -2.19
SYNE3Q6ZMZ3 SNORA24-201ENST00000384096 131 ntBASIC1.4□□□□□ -2.19
SYNE3Q6ZMZ3 RNU4-70P-201ENST00000384579 139 ntBASIC1.4□□□□□ -2.19
SYNE3Q6ZMZ3 SNORD28B-201ENST00000390993 75 ntBASIC1.4□□□□□ -2.19
SYNE3Q6ZMZ3 RNU2-70P-201ENST00000410718 179 ntBASIC1.4□□□□□ -2.19
SYNE3Q6ZMZ3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.4□□□□□ -2.19
SYNE3Q6ZMZ3 TRMT112P2-201ENST00000512910 132 ntBASIC1.4□□□□□ -2.19
SYNE3Q6ZMZ3 RNU6-138P-201ENST00000515952 107 ntBASIC1.4□□□□□ -2.19
SYNE3Q6ZMZ3 RN7SKP179-201ENST00000516126 217 ntBASIC1.4□□□□□ -2.19
SYNE3Q6ZMZ3 MRPS18CP4-201ENST00000535821 231 ntBASIC1.4□□□□□ -2.19
SYNE3Q6ZMZ3 MIR548AR-201ENST00000582191 57 ntBASIC1.4□□□□□ -2.19
SYNE3Q6ZMZ3 MIR6078-201ENST00000611069 100 ntBASIC1.4□□□□□ -2.19
SYNE3Q6ZMZ3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE3Q6ZMZ3 RNA5SP48-201ENST00000363969 126 ntBASIC1.39□□□□□ -2.19
SYNE3Q6ZMZ3 Y_RNA.297-201ENST00000364950 91 ntBASIC1.39□□□□□ -2.19
SYNE3Q6ZMZ3 SNORA1.2-201ENST00000365189 134 ntBASIC1.39□□□□□ -2.19
SYNE3Q6ZMZ3 Y_RNA.412-201ENST00000384001 104 ntBASIC1.39□□□□□ -2.19
SYNE3Q6ZMZ3 MIR520C-201ENST00000385005 87 ntBASIC1.39□□□□□ -2.19
SYNE3Q6ZMZ3 RNU6-321P-201ENST00000410912 106 ntBASIC1.39□□□□□ -2.19
SYNE3Q6ZMZ3 RNU6-938P-201ENST00000411285 103 ntBASIC1.39□□□□□ -2.19
SYNE3Q6ZMZ3 AC245047.7-201ENST00000440265 293 ntBASIC1.39□□□□□ -2.19
SYNE3Q6ZMZ3 RPL39P39-201ENST00000455840 151 ntBASIC1.39□□□□□ -2.19
SYNE3Q6ZMZ3 Y_RNA.644-201ENST00000459006 113 ntBASIC1.39□□□□□ -2.19
SYNE3Q6ZMZ3 Y_RNA.674-201ENST00000516362 113 ntBASIC1.39□□□□□ -2.19
SYNE3Q6ZMZ3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.39□□□□□ -2.19
SYNE3Q6ZMZ3 SNORD115-34-201ENST00000362441 82 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 Y_RNA.23-201ENST00000362496 106 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 SNORD115-12-201ENST00000362583 82 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 SNORD115-29-201ENST00000362834 82 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 SNORD115-9-201ENST00000362912 82 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 SNORD115-21-201ENST00000362963 81 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 SNORD115-14-201ENST00000363090 81 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 SNORD115-13-201ENST00000363358 82 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 SNORD115-41-201ENST00000363608 82 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 SNORD115-11-201ENST00000363616 82 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 SNORD115-5-201ENST00000363633 82 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 SNORD115-39-201ENST00000363694 82 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 SNORD115-4-201ENST00000363810 82 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 SNORD115-16-201ENST00000363887 82 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 SNORD115-6-201ENST00000363942 82 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 SNORD115-42-201ENST00000364273 82 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 RNU6-978P-201ENST00000364371 103 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 Y_RNA.233-201ENST00000364407 101 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 SNORD115-15-201ENST00000364809 81 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 SNORD115-1-201ENST00000364961 82 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 SNORD115-26-201ENST00000365067 82 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 SNORD115-10-201ENST00000365073 81 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 SNORD115-43-201ENST00000365503 82 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 Y_RNA.370-201ENST00000365589 108 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 SNORD115-36-201ENST00000365629 82 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 Y_RNA.537-201ENST00000384626 109 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 RNU7-41P-201ENST00000515917 61 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 RNU6-693P-201ENST00000516134 107 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 AL365205.2-201ENST00000594586 68 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 AC072026.1-201ENST00000605023 201 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 SNORD115-40-201ENST00000606510 82 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 AC008133.2-201ENST00000624540 351 ntBASIC1.38□□□□□ -2.19
SYNE3Q6ZMZ3 Y_RNA.37-201ENST00000362606 108 ntBASIC1.37□□□□□ -2.19
SYNE3Q6ZMZ3 Y_RNA.182-201ENST00000363880 111 ntBASIC1.37□□□□□ -2.19
SYNE3Q6ZMZ3 RNU6-643P-201ENST00000384018 107 ntBASIC1.37□□□□□ -2.19
SYNE3Q6ZMZ3 Y_RNA.542-201ENST00000384641 111 ntBASIC1.37□□□□□ -2.19
SYNE3Q6ZMZ3 RNA5SP247-201ENST00000411181 105 ntBASIC1.37□□□□□ -2.19
SYNE3Q6ZMZ3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.37□□□□□ -2.19
SYNE3Q6ZMZ3 AL138752.1-201ENST00000452964 351 ntBASIC1.37□□□□□ -2.19
SYNE3Q6ZMZ3 RNU7-120P-201ENST00000459334 63 ntBASIC1.37□□□□□ -2.19
SYNE3Q6ZMZ3 Y_RNA.797-201ENST00000515977 94 ntBASIC1.37□□□□□ -2.19
SYNE3Q6ZMZ3 SNORA31.4-201ENST00000516049 129 ntBASIC1.37□□□□□ -2.19
SYNE3Q6ZMZ3 RNU7-181P-201ENST00000517234 74 ntBASIC1.37□□□□□ -2.19
SYNE3Q6ZMZ3 AC134878.1-201ENST00000619901 243 ntBASIC1.37□□□□□ -2.19
SYNE3Q6ZMZ3 MIR8065-201ENST00000620577 100 ntBASIC1.37□□□□□ -2.19
SYNE3Q6ZMZ3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.37□□□□□ -2.19
SYNE3Q6ZMZ3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.36□□□□□ -2.19
SYNE3Q6ZMZ3 Y_RNA.410-201ENST00000383992 113 ntBASIC1.36□□□□□ -2.19
SYNE3Q6ZMZ3 SNORA79-201ENST00000408376 140 ntBASIC1.36□□□□□ -2.19
SYNE3Q6ZMZ3 AL121914.1-201ENST00000450188 156 ntBASIC1.36□□□□□ -2.19
SYNE3Q6ZMZ3 AL133373.1-201ENST00000497098 94 ntBASIC1.36□□□□□ -2.19
SYNE3Q6ZMZ3 AC005840.1-201ENST00000498412 377 ntBASIC1.36□□□□□ -2.19
SYNE3Q6ZMZ3 RNU6-794P-201ENST00000517261 64 ntBASIC1.36□□□□□ -2.19
SYNE3Q6ZMZ3 PRELID3BP2-201ENST00000605362 201 ntBASIC1.36□□□□□ -2.19
SYNE3Q6ZMZ3 U6.106-201ENST00000636360 105 ntBASIC1.36□□□□□ -2.19
SYNE3Q6ZMZ3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
SYNE3Q6ZMZ3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SYNE3Q6ZMZ3 RNU6-312P-201ENST00000364629 107 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 189.3 ms