Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 RPS26P48-201ENST00000491713 339 ntBASIC2.21□□□□□ -2.06
E4F1Q66K89 MIR6132-201ENST00000622083 109 ntBASIC2.21□□□□□ -2.06
E4F1Q66K89 MIR203B-201ENST00000636080 86 ntBASIC2.21□□□□□ -2.06
E4F1Q66K89 MTND5P18-201ENST00000445624 1801 ntBASIC2.21□□□□□ -2.06
E4F1Q66K89 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
E4F1Q66K89 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.2□□□□□ -2.06
E4F1Q66K89 SNORD115-34-201ENST00000362441 82 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 SNORD115-12-201ENST00000362583 82 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 SNORD115-29-201ENST00000362834 82 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 SNORD115-9-201ENST00000362912 82 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 SNORD115-21-201ENST00000362963 81 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 SNORD115-14-201ENST00000363090 81 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 SNORD115-13-201ENST00000363358 82 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 SNORD115-41-201ENST00000363608 82 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 SNORD115-11-201ENST00000363616 82 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 SNORD115-5-201ENST00000363633 82 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 SNORD115-39-201ENST00000363694 82 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 SNORD115-4-201ENST00000363810 82 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 SNORD115-16-201ENST00000363887 82 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 SNORD115-6-201ENST00000363942 82 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 SNORD115-42-201ENST00000364273 82 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 SNORD115-15-201ENST00000364809 81 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 SNORD115-1-201ENST00000364961 82 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 SNORD115-26-201ENST00000365067 82 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 SNORD115-10-201ENST00000365073 81 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 SNORD115-43-201ENST00000365503 82 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 SNORD115-36-201ENST00000365629 82 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 Y_RNA.528-201ENST00000384575 108 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 RNA5SP489-201ENST00000410986 109 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 AC107297.1-201ENST00000459991 176 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 RN7SL274P-201ENST00000492268 272 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 IGKV3-31-201ENST00000523109 329 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.2□□□□□ -2.06
E4F1Q66K89 FAM106DP-201ENST00000586416 501 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 SNORD115-40-201ENST00000606510 82 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 AC106754.2-201ENST00000623006 233 ntBASIC2.2□□□□□ -2.06
E4F1Q66K89 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.19□□□□□ -2.06
E4F1Q66K89 MIR302B-201ENST00000362188 73 ntBASIC2.19□□□□□ -2.06
E4F1Q66K89 RNU6-349P-201ENST00000362402 107 ntBASIC2.19□□□□□ -2.06
E4F1Q66K89 RNU6-457P-201ENST00000363999 107 ntBASIC2.19□□□□□ -2.06
E4F1Q66K89 RNU4-16P-201ENST00000364737 141 ntBASIC2.19□□□□□ -2.06
E4F1Q66K89 SNORA1.2-201ENST00000365189 134 ntBASIC2.19□□□□□ -2.06
E4F1Q66K89 Y_RNA.370-201ENST00000365589 108 ntBASIC2.19□□□□□ -2.06
E4F1Q66K89 RNU6-203P-201ENST00000384038 104 ntBASIC2.19□□□□□ -2.06
E4F1Q66K89 SNORA67.3-201ENST00000384366 140 ntBASIC2.19□□□□□ -2.06
E4F1Q66K89 SNORA64-201ENST00000384674 134 ntBASIC2.19□□□□□ -2.06
E4F1Q66K89 MIR548A1-201ENST00000385041 97 ntBASIC2.19□□□□□ -2.06
E4F1Q66K89 MIRLET7F2-201ENST00000385277 83 ntBASIC2.19□□□□□ -2.06
E4F1Q66K89 RPS29P24-201ENST00000486345 171 ntBASIC2.19□□□□□ -2.06
E4F1Q66K89 SUMO2P16-201ENST00000519475 264 ntBASIC2.19□□□□□ -2.06
E4F1Q66K89 MIR5089-201ENST00000580047 84 ntBASIC2.19□□□□□ -2.06
E4F1Q66K89 AC021443.1-201ENST00000604478 211 ntBASIC2.19□□□□□ -2.06
E4F1Q66K89 Y_RNA.783-201ENST00000613546 102 ntBASIC2.19□□□□□ -2.06
E4F1Q66K89 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
E4F1Q66K89 SNORA16B-201ENST00000364674 135 ntBASIC2.18□□□□□ -2.06
E4F1Q66K89 Y_RNA.649-201ENST00000459077 103 ntBASIC2.18□□□□□ -2.06
E4F1Q66K89 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.18□□□□□ -2.06
E4F1Q66K89 HSPE1P19-201ENST00000603327 295 ntBASIC2.18□□□□□ -2.06
E4F1Q66K89 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.18□□□□□ -2.06
E4F1Q66K89 SNORA6-201ENST00000384033 151 ntBASIC2.17□□□□□ -2.06
E4F1Q66K89 RN7SKP192-201ENST00000411291 327 ntBASIC2.17□□□□□ -2.06
E4F1Q66K89 RNU7-96P-201ENST00000459535 64 ntBASIC2.17□□□□□ -2.06
E4F1Q66K89 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.17□□□□□ -2.06
E4F1Q66K89 RNU6-998P-201ENST00000515894 101 ntBASIC2.17□□□□□ -2.06
E4F1Q66K89 DEFB122-202ENST00000569013 197 ntBASIC2.17□□□□□ -2.06
E4F1Q66K89 MIR4287-201ENST00000579398 78 ntBASIC2.17□□□□□ -2.06
E4F1Q66K89 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.17□□□□□ -2.06
E4F1Q66K89 RNU4-82P-201ENST00000362443 140 ntBASIC2.16□□□□□ -2.06
E4F1Q66K89 RNU6-414P-201ENST00000363705 104 ntBASIC2.16□□□□□ -2.06
E4F1Q66K89 SNORD116-21-201ENST00000384507 92 ntBASIC2.16□□□□□ -2.06
E4F1Q66K89 RNA5SP136-201ENST00000410906 107 ntBASIC2.16□□□□□ -2.06
E4F1Q66K89 AL035398.1-201ENST00000430869 322 ntBASIC2.16□□□□□ -2.06
E4F1Q66K89 RNU2-11P-201ENST00000459191 187 ntBASIC2.16□□□□□ -2.06
E4F1Q66K89 SNORD123-201ENST00000459473 70 ntBASIC2.16□□□□□ -2.06
E4F1Q66K89 UBL5P3-201ENST00000475112 231 ntBASIC2.16□□□□□ -2.06
E4F1Q66K89 RNY4P20-201ENST00000516678 93 ntBASIC2.16□□□□□ -2.06
E4F1Q66K89 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
E4F1Q66K89 RNU6-1123P-201ENST00000362347 106 ntBASIC2.15□□□□□ -2.07
E4F1Q66K89 RNU6-439P-201ENST00000384188 106 ntBASIC2.15□□□□□ -2.07
E4F1Q66K89 MIR570-201ENST00000384917 97 ntBASIC2.15□□□□□ -2.07
E4F1Q66K89 SNORD28B-201ENST00000390993 75 ntBASIC2.15□□□□□ -2.07
E4F1Q66K89 RNA5SP212-201ENST00000391223 107 ntBASIC2.15□□□□□ -2.07
E4F1Q66K89 RNU7-67P-201ENST00000459003 62 ntBASIC2.15□□□□□ -2.07
E4F1Q66K89 RNU6-958P-201ENST00000516995 106 ntBASIC2.15□□□□□ -2.07
E4F1Q66K89 MIR548AR-201ENST00000582191 57 ntBASIC2.15□□□□□ -2.07
E4F1Q66K89 MIR6852-201ENST00000621699 66 ntBASIC2.15□□□□□ -2.07
E4F1Q66K89 AL442644.1-201ENST00000454390 3105 ntBASIC2.15□□□□□ -2.07
E4F1Q66K89 Y_RNA.35-201ENST00000362601 101 ntBASIC2.14□□□□□ -2.07
E4F1Q66K89 SNORA63.4-201ENST00000362763 126 ntBASIC2.14□□□□□ -2.07
E4F1Q66K89 HMGN2P19-201ENST00000425149 265 ntBASIC2.14□□□□□ -2.07
E4F1Q66K89 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.14□□□□□ -2.07
E4F1Q66K89 RNU7-164P-201ENST00000459221 62 ntBASIC2.14□□□□□ -2.07
E4F1Q66K89 Y_RNA.709-201ENST00000516952 92 ntBASIC2.14□□□□□ -2.07
E4F1Q66K89 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.14□□□□□ -2.07
E4F1Q66K89 AC095038.3-201ENST00000634439 195 ntBASIC2.14□□□□□ -2.07
E4F1Q66K89 SNORA70.7-201ENST00000384159 133 ntBASIC2.13□□□□□ -2.07
E4F1Q66K89 RNY4P18-201ENST00000391107 89 ntBASIC2.13□□□□□ -2.07
E4F1Q66K89 AC004965.1-201ENST00000413033 213 ntBASIC2.13□□□□□ -2.07
E4F1Q66K89 COX6CP6-201ENST00000490840 228 ntBASIC2.13□□□□□ -2.07
E4F1Q66K89 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 198.3 ms