Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 RNU6-44P-201ENST00000384045 107 ntBASIC2.35□□□□□ -2.03
SNAP47Q5SQN1 SNORA70.7-201ENST00000384159 133 ntBASIC2.35□□□□□ -2.03
SNAP47Q5SQN1 RNU6-439P-201ENST00000384188 106 ntBASIC2.35□□□□□ -2.03
SNAP47Q5SQN1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SNAP47Q5SQN1 SNORD28B-201ENST00000390993 75 ntBASIC2.35□□□□□ -2.03
SNAP47Q5SQN1 AL359511.1-201ENST00000402970 211 ntBASIC2.35□□□□□ -2.03
SNAP47Q5SQN1 SNORA3.2-201ENST00000408221 125 ntBASIC2.35□□□□□ -2.03
SNAP47Q5SQN1 AL161935.2-201ENST00000414627 60 ntBASIC2.35□□□□□ -2.03
SNAP47Q5SQN1 RPS12P2-201ENST00000439728 269 ntBASIC2.35□□□□□ -2.03
SNAP47Q5SQN1 Y_RNA.649-201ENST00000459077 103 ntBASIC2.35□□□□□ -2.03
SNAP47Q5SQN1 RNU6-917P-201ENST00000516294 104 ntBASIC2.35□□□□□ -2.03
SNAP47Q5SQN1 SUMO2P16-201ENST00000519475 264 ntBASIC2.35□□□□□ -2.03
SNAP47Q5SQN1 MIR548AR-201ENST00000582191 57 ntBASIC2.35□□□□□ -2.03
SNAP47Q5SQN1 AC021443.1-201ENST00000604478 211 ntBASIC2.35□□□□□ -2.03
SNAP47Q5SQN1 AC106754.2-201ENST00000623006 233 ntBASIC2.35□□□□□ -2.03
SNAP47Q5SQN1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.35□□□□□ -2.03
SNAP47Q5SQN1 AC095038.3-201ENST00000634439 195 ntBASIC2.35□□□□□ -2.03
SNAP47Q5SQN1 MIR203B-201ENST00000636080 86 ntBASIC2.35□□□□□ -2.03
SNAP47Q5SQN1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SNAP47Q5SQN1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SNAP47Q5SQN1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
SNAP47Q5SQN1 MIR302B-201ENST00000362188 73 ntBASIC2.34□□□□□ -2.03
SNAP47Q5SQN1 JTBP1-201ENST00000441314 247 ntBASIC2.34□□□□□ -2.03
SNAP47Q5SQN1 RNU2-11P-201ENST00000459191 187 ntBASIC2.34□□□□□ -2.03
SNAP47Q5SQN1 COX6CP6-201ENST00000490840 228 ntBASIC2.34□□□□□ -2.03
SNAP47Q5SQN1 RNU2-13P-201ENST00000515909 113 ntBASIC2.34□□□□□ -2.03
SNAP47Q5SQN1 SNORA31.4-201ENST00000516049 129 ntBASIC2.34□□□□□ -2.03
SNAP47Q5SQN1 RNU6-589P-201ENST00000516485 107 ntBASIC2.34□□□□□ -2.03
SNAP47Q5SQN1 RNY4P20-201ENST00000516678 93 ntBASIC2.34□□□□□ -2.03
SNAP47Q5SQN1 MIR4287-201ENST00000579398 78 ntBASIC2.34□□□□□ -2.03
SNAP47Q5SQN1 AC104984.5-201ENST00000586878 94 ntBASIC2.34□□□□□ -2.03
SNAP47Q5SQN1 AC046143.2-201ENST00000609789 160 ntBASIC2.34□□□□□ -2.03
SNAP47Q5SQN1 AL391516.1-201ENST00000554380 2449 ntBASIC2.34□□□□□ -2.03
SNAP47Q5SQN1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.34□□□□□ -2.04
SNAP47Q5SQN1 RNU6-661P-201ENST00000362409 107 ntBASIC2.33□□□□□ -2.04
SNAP47Q5SQN1 RNU4-16P-201ENST00000364737 141 ntBASIC2.33□□□□□ -2.04
SNAP47Q5SQN1 RPS29P29-201ENST00000456396 171 ntBASIC2.33□□□□□ -2.04
SNAP47Q5SQN1 RNA5SP281-201ENST00000516504 135 ntBASIC2.33□□□□□ -2.04
SNAP47Q5SQN1 SNORA74.3-201ENST00000517108 154 ntBASIC2.33□□□□□ -2.04
SNAP47Q5SQN1 DEFB122-202ENST00000569013 197 ntBASIC2.33□□□□□ -2.04
SNAP47Q5SQN1 HSPE1P19-201ENST00000603327 295 ntBASIC2.33□□□□□ -2.04
SNAP47Q5SQN1 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.33□□□□□ -2.04
SNAP47Q5SQN1 ZNF658B-202ENST00000615961 3375 ntBASIC2.33□□□□□ -2.04
SNAP47Q5SQN1 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SNAP47Q5SQN1 SNORA24-201ENST00000384096 131 ntBASIC2.32□□□□□ -2.04
SNAP47Q5SQN1 SNORD116-21-201ENST00000384507 92 ntBASIC2.32□□□□□ -2.04
SNAP47Q5SQN1 RNY4P18-201ENST00000391107 89 ntBASIC2.32□□□□□ -2.04
SNAP47Q5SQN1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.32□□□□□ -2.04
SNAP47Q5SQN1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.32□□□□□ -2.04
SNAP47Q5SQN1 UBL5P3-201ENST00000475112 231 ntBASIC2.32□□□□□ -2.04
SNAP47Q5SQN1 AC026436.1-201ENST00000510537 270 ntBASIC2.32□□□□□ -2.04
SNAP47Q5SQN1 Y_RNA.709-201ENST00000516952 92 ntBASIC2.32□□□□□ -2.04
SNAP47Q5SQN1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.32□□□□□ -2.04
SNAP47Q5SQN1 MIR4305-201ENST00000583252 102 ntBASIC2.32□□□□□ -2.04
SNAP47Q5SQN1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SNAP47Q5SQN1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SNAP47Q5SQN1 AC005336.3-201ENST00000623833 2679 ntBASIC2.31□□□□□ -2.04
SNAP47Q5SQN1 RNA5SP456-201ENST00000364002 114 ntBASIC2.31□□□□□ -2.04
SNAP47Q5SQN1 Y_RNA.298-201ENST00000364960 107 ntBASIC2.31□□□□□ -2.04
SNAP47Q5SQN1 MIR570-201ENST00000384917 97 ntBASIC2.31□□□□□ -2.04
SNAP47Q5SQN1 RPL23AP6-201ENST00000446637 472 ntBASIC2.31□□□□□ -2.04
SNAP47Q5SQN1 RNU7-67P-201ENST00000459003 62 ntBASIC2.31□□□□□ -2.04
SNAP47Q5SQN1 RNU7-164P-201ENST00000459221 62 ntBASIC2.31□□□□□ -2.04
SNAP47Q5SQN1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.31□□□□□ -2.04
SNAP47Q5SQN1 RNU7-53P-201ENST00000516705 60 ntBASIC2.31□□□□□ -2.04
SNAP47Q5SQN1 MIR3683-201ENST00000580847 82 ntBASIC2.31□□□□□ -2.04
SNAP47Q5SQN1 MIR4713-201ENST00000582691 75 ntBASIC2.31□□□□□ -2.04
SNAP47Q5SQN1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.31□□□□□ -2.04
SNAP47Q5SQN1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SNAP47Q5SQN1 RNU6-880P-201ENST00000384526 107 ntBASIC2.3□□□□□ -2.04
SNAP47Q5SQN1 MIR548A1-201ENST00000385041 97 ntBASIC2.3□□□□□ -2.04
SNAP47Q5SQN1 MIR513A1-201ENST00000385138 129 ntBASIC2.3□□□□□ -2.04
SNAP47Q5SQN1 RNA5SP425-201ENST00000410336 112 ntBASIC2.3□□□□□ -2.04
SNAP47Q5SQN1 RNU7-123P-201ENST00000515911 60 ntBASIC2.3□□□□□ -2.04
SNAP47Q5SQN1 RNU1-41P-201ENST00000516161 162 ntBASIC2.3□□□□□ -2.04
SNAP47Q5SQN1 RNU1-48P-201ENST00000516400 162 ntBASIC2.3□□□□□ -2.04
SNAP47Q5SQN1 MIR4791-201ENST00000607666 84 ntBASIC2.3□□□□□ -2.04
SNAP47Q5SQN1 MIR6840-201ENST00000611937 71 ntBASIC2.3□□□□□ -2.04
SNAP47Q5SQN1 AC243994.1-201ENST00000618627 109 ntBASIC2.3□□□□□ -2.04
SNAP47Q5SQN1 AC021613.1-201ENST00000623880 111 ntBASIC2.3□□□□□ -2.04
SNAP47Q5SQN1 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
SNAP47Q5SQN1 Y_RNA.35-201ENST00000362601 101 ntBASIC2.29□□□□□ -2.04
SNAP47Q5SQN1 RNU6-958P-201ENST00000516995 106 ntBASIC2.29□□□□□ -2.04
SNAP47Q5SQN1 MIR4299-201ENST00000577899 72 ntBASIC2.29□□□□□ -2.04
SNAP47Q5SQN1 MIR6873-201ENST00000622788 63 ntBASIC2.29□□□□□ -2.04
SNAP47Q5SQN1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.29□□□□□ -2.04
SNAP47Q5SQN1 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.29□□□□□ -2.04
SNAP47Q5SQN1 AC092881.1-201ENST00000638218 2733 ntBASIC2.29□□□□□ -2.04
SNAP47Q5SQN1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
SNAP47Q5SQN1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.28□□□□□ -2.04
SNAP47Q5SQN1 Y_RNA.198-201ENST00000364013 98 ntBASIC2.28□□□□□ -2.04
SNAP47Q5SQN1 Y_RNA.537-201ENST00000384626 109 ntBASIC2.28□□□□□ -2.04
SNAP47Q5SQN1 RNU6-1067P-201ENST00000384752 107 ntBASIC2.28□□□□□ -2.04
SNAP47Q5SQN1 MIR653-201ENST00000385279 96 ntBASIC2.28□□□□□ -2.04
SNAP47Q5SQN1 RNA5SP144-201ENST00000410846 116 ntBASIC2.28□□□□□ -2.04
SNAP47Q5SQN1 RNU2-35P-201ENST00000516446 142 ntBASIC2.28□□□□□ -2.04
SNAP47Q5SQN1 RNU7-43P-201ENST00000516554 64 ntBASIC2.28□□□□□ -2.04
SNAP47Q5SQN1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
SNAP47Q5SQN1 Y_RNA.213-201ENST00000364178 111 ntBASIC2.27□□□□□ -2.05
SNAP47Q5SQN1 RNA5SP259-201ENST00000365541 109 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 196.7 ms