Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AL034345.1-201ENST00000407768 123 ntBASIC2.65□□□□□ -1.99
SOX4Q06945 RNU6-733P-201ENST00000410759 104 ntBASIC2.65□□□□□ -1.99
SOX4Q06945 HSPE1P9-201ENST00000440046 311 ntBASIC2.65□□□□□ -1.99
SOX4Q06945 RNU7-45P-201ENST00000459460 63 ntBASIC2.65□□□□□ -1.99
SOX4Q06945 UBL5P3-201ENST00000475112 231 ntBASIC2.65□□□□□ -1.99
SOX4Q06945 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.65□□□□□ -1.99
SOX4Q06945 AC007336.1-201ENST00000576365 3828 ntBASIC2.65□□□□□ -1.99
SOX4Q06945 MIR4694-201ENST00000578534 80 ntBASIC2.65□□□□□ -1.99
SOX4Q06945 MIR5094-201ENST00000578766 85 ntBASIC2.65□□□□□ -1.99
SOX4Q06945 MIR4435-1-201ENST00000582552 80 ntBASIC2.65□□□□□ -1.99
SOX4Q06945 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SOX4Q06945 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.64□□□□□ -1.99
SOX4Q06945 RNA5SP456-201ENST00000364002 114 ntBASIC2.64□□□□□ -1.99
SOX4Q06945 RNU4-67P-201ENST00000364569 141 ntBASIC2.64□□□□□ -1.99
SOX4Q06945 Y_RNA.360-201ENST00000365512 102 ntBASIC2.64□□□□□ -1.99
SOX4Q06945 MIR577-201ENST00000385196 96 ntBASIC2.64□□□□□ -1.99
SOX4Q06945 BX510359.4-201ENST00000423750 193 ntBASIC2.64□□□□□ -1.99
SOX4Q06945 RNA5SP168-201ENST00000516642 112 ntBASIC2.64□□□□□ -1.99
SOX4Q06945 MIR3945-201ENST00000581853 98 ntBASIC2.64□□□□□ -1.99
SOX4Q06945 AC064859.1-201ENST00000624741 174 ntBASIC2.64□□□□□ -1.99
SOX4Q06945 VTRNA1-1-201ENST00000363120 99 ntBASIC2.63□□□□□ -1.99
SOX4Q06945 RNY1P10-201ENST00000363268 113 ntBASIC2.63□□□□□ -1.99
SOX4Q06945 RNU6-832P-201ENST00000363319 107 ntBASIC2.63□□□□□ -1.99
SOX4Q06945 Y_RNA.171-201ENST00000363760 102 ntBASIC2.63□□□□□ -1.99
SOX4Q06945 SNORD114-30-201ENST00000364448 72 ntBASIC2.63□□□□□ -1.99
SOX4Q06945 RNU6-1152P-201ENST00000384576 107 ntBASIC2.63□□□□□ -1.99
SOX4Q06945 MIR605-201ENST00000385078 83 ntBASIC2.63□□□□□ -1.99
SOX4Q06945 RNU4-69P-201ENST00000410677 143 ntBASIC2.63□□□□□ -1.99
SOX4Q06945 RNA5SP508-201ENST00000411327 119 ntBASIC2.63□□□□□ -1.99
SOX4Q06945 HMGN2P35-201ENST00000412164 270 ntBASIC2.63□□□□□ -1.99
SOX4Q06945 AC069257.2-201ENST00000441819 155 ntBASIC2.63□□□□□ -1.99
SOX4Q06945 AC104389.3-201ENST00000445629 235 ntBASIC2.63□□□□□ -1.99
SOX4Q06945 RNU7-113P-201ENST00000459273 62 ntBASIC2.63□□□□□ -1.99
SOX4Q06945 RNU7-12P-201ENST00000516030 62 ntBASIC2.63□□□□□ -1.99
SOX4Q06945 AC046143.2-201ENST00000609789 160 ntBASIC2.63□□□□□ -1.99
SOX4Q06945 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.63□□□□□ -1.99
SOX4Q06945 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SOX4Q06945 Y_RNA.290-201ENST00000364879 114 ntBASIC2.62□□□□□ -1.99
SOX4Q06945 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SOX4Q06945 RNU6-1319P-201ENST00000390855 104 ntBASIC2.62□□□□□ -1.99
SOX4Q06945 RNU6-747P-201ENST00000390928 104 ntBASIC2.62□□□□□ -1.99
SOX4Q06945 RNU6-241P-201ENST00000391148 104 ntBASIC2.62□□□□□ -1.99
SOX4Q06945 RNU6-177P-201ENST00000411257 104 ntBASIC2.62□□□□□ -1.99
SOX4Q06945 AC234781.5-201ENST00000508429 271 ntBASIC2.62□□□□□ -1.99
SOX4Q06945 RNU7-61P-201ENST00000515897 61 ntBASIC2.62□□□□□ -1.99
SOX4Q06945 RNU6-795P-201ENST00000516323 103 ntBASIC2.62□□□□□ -1.99
SOX4Q06945 RNU6-1258P-201ENST00000516911 111 ntBASIC2.62□□□□□ -1.99
SOX4Q06945 SNORD53-201ENST00000579969 78 ntBASIC2.62□□□□□ -1.99
SOX4Q06945 MIR5092-201ENST00000583139 88 ntBASIC2.62□□□□□ -1.99
SOX4Q06945 AC103810.6-201ENST00000606708 136 ntBASIC2.62□□□□□ -1.99
SOX4Q06945 AC012531.4-201ENST00000616509 177 ntBASIC2.62□□□□□ -1.99
SOX4Q06945 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.62□□□□□ -1.99
SOX4Q06945 RNU6-170P-201ENST00000362832 104 ntBASIC2.61□□□□□ -1.99
SOX4Q06945 SNORA1.2-201ENST00000365189 134 ntBASIC2.61□□□□□ -1.99
SOX4Q06945 RNU6-950P-201ENST00000384651 107 ntBASIC2.61□□□□□ -1.99
SOX4Q06945 MIR516B2-201ENST00000385190 85 ntBASIC2.61□□□□□ -1.99
SOX4Q06945 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SOX4Q06945 RNU6-644P-201ENST00000391155 98 ntBASIC2.61□□□□□ -1.99
SOX4Q06945 SNORA3.2-201ENST00000408221 125 ntBASIC2.61□□□□□ -1.99
SOX4Q06945 RN7SKP192-201ENST00000411291 327 ntBASIC2.61□□□□□ -1.99
SOX4Q06945 MIR3152-201ENST00000579801 74 ntBASIC2.61□□□□□ -1.99
SOX4Q06945 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SOX4Q06945 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
SOX4Q06945 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SOX4Q06945 Y_RNA.17-201ENST00000362433 111 ntBASIC2.6□□□□□ -1.99
SOX4Q06945 RNU1-91P-201ENST00000364746 163 ntBASIC2.6□□□□□ -1.99
SOX4Q06945 Y_RNA.370-201ENST00000365589 108 ntBASIC2.6□□□□□ -1.99
SOX4Q06945 RNU11-3P-201ENST00000391111 133 ntBASIC2.6□□□□□ -1.99
SOX4Q06945 Y_RNA.593-201ENST00000410292 98 ntBASIC2.6□□□□□ -1.99
SOX4Q06945 SNORA7.5-201ENST00000410672 110 ntBASIC2.6□□□□□ -1.99
SOX4Q06945 AC004941.2-201ENST00000427009 228 ntBASIC2.6□□□□□ -1.99
SOX4Q06945 RNU1-41P-201ENST00000516161 162 ntBASIC2.6□□□□□ -1.99
SOX4Q06945 RNU1-48P-201ENST00000516400 162 ntBASIC2.6□□□□□ -1.99
SOX4Q06945 RNU6-638P-201ENST00000516582 104 ntBASIC2.6□□□□□ -1.99
SOX4Q06945 MIR3126-201ENST00000577443 74 ntBASIC2.6□□□□□ -1.99
SOX4Q06945 SNORD115-2-201ENST00000362842 82 ntBASIC2.59□□□□□ -1.99
SOX4Q06945 SNORD115-20-201ENST00000365099 82 ntBASIC2.59□□□□□ -1.99
SOX4Q06945 MIR597-201ENST00000384968 97 ntBASIC2.59□□□□□ -1.99
SOX4Q06945 RNU4-53P-201ENST00000410828 140 ntBASIC2.59□□□□□ -1.99
SOX4Q06945 AC096949.1-201ENST00000412047 152 ntBASIC2.59□□□□□ -1.99
SOX4Q06945 RNU7-67P-201ENST00000459003 62 ntBASIC2.59□□□□□ -1.99
SOX4Q06945 RPL23AP63-201ENST00000498752 471 ntBASIC2.59□□□□□ -1.99
SOX4Q06945 AC026436.1-201ENST00000510537 270 ntBASIC2.59□□□□□ -1.99
SOX4Q06945 Y_RNA.685-201ENST00000516532 108 ntBASIC2.59□□□□□ -1.99
SOX4Q06945 RNU6-958P-201ENST00000516995 106 ntBASIC2.59□□□□□ -1.99
SOX4Q06945 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.59□□□□□ -1.99
SOX4Q06945 AC016717.2-201ENST00000609089 5141 ntBASIC2.59□□□□□ -1.99
SOX4Q06945 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.59□□□□□ -2
SOX4Q06945 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SOX4Q06945 SNORA22.1-201ENST00000362701 134 ntBASIC2.58□□□□□ -2
SOX4Q06945 SNORA70.7-201ENST00000384159 133 ntBASIC2.58□□□□□ -2
SOX4Q06945 Y_RNA.470-201ENST00000384307 117 ntBASIC2.58□□□□□ -2
SOX4Q06945 RNU6-1031P-201ENST00000384773 107 ntBASIC2.58□□□□□ -2
SOX4Q06945 MIR452-201ENST00000385020 85 ntBASIC2.58□□□□□ -2
SOX4Q06945 RNU6-679P-201ENST00000391003 106 ntBASIC2.58□□□□□ -2
SOX4Q06945 AL353813.1-201ENST00000440700 253 ntBASIC2.58□□□□□ -2
SOX4Q06945 RNU6-162P-201ENST00000516228 103 ntBASIC2.58□□□□□ -2
SOX4Q06945 RNA5SP24-201ENST00000516478 95 ntBASIC2.58□□□□□ -2
SOX4Q06945 RNA5SP33-201ENST00000516687 98 ntBASIC2.58□□□□□ -2
SOX4Q06945 AC022254.1-201ENST00000567857 235 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 249.1 ms