Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 Y_RNA.692-201ENST00000516627 105 ntBASIC1.36□□□□□ -2.19
LMO4P61968 AC084364.2-201ENST00000546924 395 ntBASIC1.36□□□□□ -2.19
LMO4P61968 AC090049.2-201ENST00000550377 109 ntBASIC1.36□□□□□ -2.19
LMO4P61968 Y_RNA.757-201ENST00000578934 114 ntBASIC1.36□□□□□ -2.19
LMO4P61968 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.36□□□□□ -2.19
LMO4P61968 MIR8054-201ENST00000620877 86 ntBASIC1.36□□□□□ -2.19
LMO4P61968 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
LMO4P61968 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.36□□□□□ -2.19
LMO4P61968 Y_RNA.81-201ENST00000362997 102 ntBASIC1.35□□□□□ -2.19
LMO4P61968 Y_RNA.114-201ENST00000363265 113 ntBASIC1.35□□□□□ -2.19
LMO4P61968 RNU6-414P-201ENST00000363705 104 ntBASIC1.35□□□□□ -2.19
LMO4P61968 SNORD14E-201ENST00000364009 85 ntBASIC1.35□□□□□ -2.19
LMO4P61968 RNU6-1019P-201ENST00000364424 107 ntBASIC1.35□□□□□ -2.19
LMO4P61968 RNU6-309P-201ENST00000364573 106 ntBASIC1.35□□□□□ -2.19
LMO4P61968 Y_RNA.265-201ENST00000364677 108 ntBASIC1.35□□□□□ -2.19
LMO4P61968 SNORD48-201ENST00000364953 64 ntBASIC1.35□□□□□ -2.19
LMO4P61968 RNU6-215P-201ENST00000365169 102 ntBASIC1.35□□□□□ -2.19
LMO4P61968 RNU6-1292P-201ENST00000383856 107 ntBASIC1.35□□□□□ -2.19
LMO4P61968 MIR802-201ENST00000390235 94 ntBASIC1.35□□□□□ -2.19
LMO4P61968 SNORD77.3-201ENST00000391113 65 ntBASIC1.35□□□□□ -2.19
LMO4P61968 RNA5SP482-201ENST00000391269 118 ntBASIC1.35□□□□□ -2.19
LMO4P61968 MIR548O-201ENST00000408583 114 ntBASIC1.35□□□□□ -2.19
LMO4P61968 AP1B1P2-201ENST00000416196 106 ntBASIC1.35□□□□□ -2.19
LMO4P61968 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.35□□□□□ -2.19
LMO4P61968 SNRPGP14-201ENST00000435400 219 ntBASIC1.35□□□□□ -2.19
LMO4P61968 HSPE1P9-201ENST00000440046 311 ntBASIC1.35□□□□□ -2.19
LMO4P61968 AL158147.1-201ENST00000443970 75 ntBASIC1.35□□□□□ -2.19
LMO4P61968 AC108729.3-201ENST00000513484 108 ntBASIC1.35□□□□□ -2.19
LMO4P61968 RNU6-772P-201ENST00000516042 105 ntBASIC1.35□□□□□ -2.19
LMO4P61968 Y_RNA.712-201ENST00000517011 92 ntBASIC1.35□□□□□ -2.19
LMO4P61968 Y_RNA.714-201ENST00000517065 90 ntBASIC1.35□□□□□ -2.19
LMO4P61968 MIR3121-201ENST00000579680 77 ntBASIC1.35□□□□□ -2.19
LMO4P61968 snoU13.31-201ENST00000607291 104 ntBASIC1.35□□□□□ -2.19
LMO4P61968 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.35□□□□□ -2.19
LMO4P61968 MIR376A2-201ENST00000636782 80 ntBASIC1.35□□□□□ -2.19
LMO4P61968 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.35□□□□□ -2.19
LMO4P61968 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.35□□□□□ -2.19
LMO4P61968 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.34□□□□□ -2.19
LMO4P61968 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
LMO4P61968 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.34□□□□□ -2.19
LMO4P61968 MTND5P32-201ENST00000560711 1802 ntBASIC1.34□□□□□ -2.19
LMO4P61968 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
LMO4P61968 RNU6-268P-201ENST00000364174 107 ntBASIC1.34□□□□□ -2.19
LMO4P61968 Y_RNA.242-201ENST00000364473 110 ntBASIC1.34□□□□□ -2.19
LMO4P61968 snoU2-30.1-201ENST00000365012 70 ntBASIC1.34□□□□□ -2.19
LMO4P61968 RNU6-439P-201ENST00000384188 106 ntBASIC1.34□□□□□ -2.19
LMO4P61968 Y_RNA.563-201ENST00000384707 108 ntBASIC1.34□□□□□ -2.19
LMO4P61968 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
LMO4P61968 RNU6-440P-201ENST00000390882 105 ntBASIC1.34□□□□□ -2.19
LMO4P61968 AF228730.3-201ENST00000436691 102 ntBASIC1.34□□□□□ -2.19
LMO4P61968 Y_RNA.651-201ENST00000459380 103 ntBASIC1.34□□□□□ -2.19
LMO4P61968 RNU5E-3P-201ENST00000515913 68 ntBASIC1.34□□□□□ -2.19
LMO4P61968 RN7SKP179-201ENST00000516126 217 ntBASIC1.34□□□□□ -2.19
LMO4P61968 RNA5SP236-201ENST00000516169 116 ntBASIC1.34□□□□□ -2.19
LMO4P61968 RNU7-25P-201ENST00000516544 62 ntBASIC1.34□□□□□ -2.19
LMO4P61968 SNORD45.4-201ENST00000516629 73 ntBASIC1.34□□□□□ -2.19
LMO4P61968 RNU7-28P-201ENST00000516759 62 ntBASIC1.34□□□□□ -2.19
LMO4P61968 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.34□□□□□ -2.19
LMO4P61968 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.34□□□□□ -2.19
LMO4P61968 AC006441.5-201ENST00000612680 209 ntBASIC1.34□□□□□ -2.19
LMO4P61968 MIR8074-201ENST00000615081 81 ntBASIC1.34□□□□□ -2.19
LMO4P61968 uc_338.20-201ENST00000621563 178 ntBASIC1.34□□□□□ -2.19
LMO4P61968 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
LMO4P61968 MIRLET7C-201ENST00000362160 84 ntBASIC1.33□□□□□ -2.2
LMO4P61968 RNU6-1084P-201ENST00000362498 107 ntBASIC1.33□□□□□ -2.2
LMO4P61968 SNORA63D-201ENST00000364359 132 ntBASIC1.33□□□□□ -2.2
LMO4P61968 SNORA4.2-201ENST00000365313 147 ntBASIC1.33□□□□□ -2.2
LMO4P61968 SNORD18B-201ENST00000365659 72 ntBASIC1.33□□□□□ -2.2
LMO4P61968 RNU6-442P-201ENST00000383968 104 ntBASIC1.33□□□□□ -2.2
LMO4P61968 RNU6-296P-201ENST00000384608 107 ntBASIC1.33□□□□□ -2.2
LMO4P61968 SNORA40.5-201ENST00000391061 128 ntBASIC1.33□□□□□ -2.2
LMO4P61968 RN7SL274P-201ENST00000492268 272 ntBASIC1.33□□□□□ -2.2
LMO4P61968 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.33□□□□□ -2.2
LMO4P61968 RNU6-1053P-201ENST00000515930 101 ntBASIC1.33□□□□□ -2.2
LMO4P61968 RNU6-1149P-201ENST00000516810 97 ntBASIC1.33□□□□□ -2.2
LMO4P61968 RNA5SP481-201ENST00000516814 122 ntBASIC1.33□□□□□ -2.2
LMO4P61968 SCARNA15-202ENST00000516881 127 ntBASIC1.33□□□□□ -2.2
LMO4P61968 RNA5SP364-201ENST00000516938 78 ntBASIC1.33□□□□□ -2.2
LMO4P61968 RNU6-1116P-201ENST00000517269 99 ntBASIC1.33□□□□□ -2.2
LMO4P61968 SNORD53B-201ENST00000577887 78 ntBASIC1.33□□□□□ -2.2
LMO4P61968 AL022345.2-201ENST00000606307 135 ntBASIC1.33□□□□□ -2.2
LMO4P61968 MIR3914-2-201ENST00000637339 95 ntBASIC1.33□□□□□ -2.2
LMO4P61968 MIR424-201ENST00000362227 98 ntBASIC1.32□□□□□ -2.2
LMO4P61968 RNU6-60P-201ENST00000364792 103 ntBASIC1.32□□□□□ -2.2
LMO4P61968 Y_RNA.547-201ENST00000384654 119 ntBASIC1.32□□□□□ -2.2
LMO4P61968 MIR934-201ENST00000401241 83 ntBASIC1.32□□□□□ -2.2
LMO4P61968 MIR1267-201ENST00000408723 78 ntBASIC1.32□□□□□ -2.2
LMO4P61968 Y_RNA.630-201ENST00000411370 108 ntBASIC1.32□□□□□ -2.2
LMO4P61968 AC114811.1-201ENST00000507207 168 ntBASIC1.32□□□□□ -2.2
LMO4P61968 RNU6-781P-201ENST00000516377 101 ntBASIC1.32□□□□□ -2.2
LMO4P61968 RNU6-1061P-201ENST00000516530 99 ntBASIC1.32□□□□□ -2.2
LMO4P61968 RNA5SP437-201ENST00000517249 129 ntBASIC1.32□□□□□ -2.2
LMO4P61968 DNAJC19P9-201ENST00000555084 351 ntBASIC1.32□□□□□ -2.2
LMO4P61968 AC024614.2-201ENST00000577584 372 ntBASIC1.32□□□□□ -2.2
LMO4P61968 MIR5197-201ENST00000583721 112 ntBASIC1.32□□□□□ -2.2
LMO4P61968 AL645939.4-201ENST00000604495 135 ntBASIC1.32□□□□□ -2.2
LMO4P61968 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
LMO4P61968 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
LMO4P61968 AL442644.1-201ENST00000454390 3105 ntBASIC1.31□□□□□ -2.2
LMO4P61968 Y_RNA.4-201ENST00000362333 112 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 207.1 ms