Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
EPHB3P54753 SNORA27-201ENST00000384323 126 ntBASIC2.41□□□□□ -2.02
EPHB3P54753 Y_RNA.601-201ENST00000410500 113 ntBASIC2.41□□□□□ -2.02
EPHB3P54753 RN7SKP200-201ENST00000410564 320 ntBASIC2.41□□□□□ -2.02
EPHB3P54753 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.41□□□□□ -2.02
EPHB3P54753 RNU6-893P-201ENST00000458841 100 ntBASIC2.41□□□□□ -2.02
EPHB3P54753 RNU7-96P-201ENST00000459535 64 ntBASIC2.41□□□□□ -2.02
EPHB3P54753 RPS23P4-201ENST00000487908 423 ntBASIC2.41□□□□□ -2.02
EPHB3P54753 AC113410.1-201ENST00000505029 247 ntBASIC2.41□□□□□ -2.02
EPHB3P54753 RNU6-998P-201ENST00000515894 101 ntBASIC2.41□□□□□ -2.02
EPHB3P54753 SNORA31.4-201ENST00000516049 129 ntBASIC2.41□□□□□ -2.02
EPHB3P54753 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.41□□□□□ -2.02
EPHB3P54753 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.41□□□□□ -2.02
EPHB3P54753 AC022513.1-201ENST00000624512 117 ntBASIC2.41□□□□□ -2.02
EPHB3P54753 AC027279.3-201ENST00000625055 122 ntBASIC2.41□□□□□ -2.02
EPHB3P54753 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
EPHB3P54753 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
EPHB3P54753 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
EPHB3P54753 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
EPHB3P54753 MIRLET7C-201ENST00000362160 84 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 Y_RNA.10-201ENST00000362371 110 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 SNORD115-34-201ENST00000362441 82 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 SNORD115-12-201ENST00000362583 82 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 SNORD115-29-201ENST00000362834 82 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 SNORD115-9-201ENST00000362912 82 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 SNORD115-21-201ENST00000362963 81 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 SNORD115-14-201ENST00000363090 81 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 SNORD115-13-201ENST00000363358 82 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 SNORD115-41-201ENST00000363608 82 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 SNORD115-11-201ENST00000363616 82 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 SNORD115-5-201ENST00000363633 82 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 SNORD115-39-201ENST00000363694 82 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 SNORD115-4-201ENST00000363810 82 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 SNORD115-16-201ENST00000363887 82 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 SNORD115-6-201ENST00000363942 82 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 SNORD115-42-201ENST00000364273 82 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 SNORD115-15-201ENST00000364809 81 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 SNORD115-1-201ENST00000364961 82 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 SNORD115-26-201ENST00000365067 82 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 SNORD115-10-201ENST00000365073 81 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 SNORD115-43-201ENST00000365503 82 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 SNORD115-36-201ENST00000365629 82 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 RNU6-573P-201ENST00000383938 106 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 RNU1-148P-201ENST00000384472 162 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 RNU6-592P-201ENST00000411333 103 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 AC096949.1-201ENST00000412047 152 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 RNA5SP57-201ENST00000459463 123 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 AC114811.1-201ENST00000507207 168 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 MIR3618-201ENST00000580330 88 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 MIR5194-201ENST00000582634 120 ntBASIC2.4□□□□□ -2.03
EPHB3P54753 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.4□□□□□ -2.03
EPHB3P54753 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.4□□□□□ -2.03
EPHB3P54753 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
EPHB3P54753 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
EPHB3P54753 Y_RNA.219-201ENST00000364232 113 ntBASIC2.39□□□□□ -2.03
EPHB3P54753 Y_RNA.507-201ENST00000384500 99 ntBASIC2.39□□□□□ -2.03
EPHB3P54753 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
EPHB3P54753 RNA5SP109-201ENST00000391010 116 ntBASIC2.39□□□□□ -2.03
EPHB3P54753 PGBD4P5-201ENST00000445958 426 ntBASIC2.39□□□□□ -2.03
EPHB3P54753 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.39□□□□□ -2.03
EPHB3P54753 MIR4694-201ENST00000578534 80 ntBASIC2.39□□□□□ -2.03
EPHB3P54753 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.39□□□□□ -2.03
EPHB3P54753 MIR21-201ENST00000362134 72 ntBASIC2.38□□□□□ -2.03
EPHB3P54753 RNU6-363P-201ENST00000362895 105 ntBASIC2.38□□□□□ -2.03
EPHB3P54753 RNU6-1134P-201ENST00000365156 101 ntBASIC2.38□□□□□ -2.03
EPHB3P54753 MIR504-201ENST00000385065 83 ntBASIC2.38□□□□□ -2.03
EPHB3P54753 AL022718.1-201ENST00000412004 84 ntBASIC2.38□□□□□ -2.03
EPHB3P54753 SNX2P2-201ENST00000424553 323 ntBASIC2.38□□□□□ -2.03
EPHB3P54753 STAG3L5P-204ENST00000443759 179 ntBASIC2.38□□□□□ -2.03
EPHB3P54753 AC004812.1-201ENST00000540773 146 ntBASIC2.38□□□□□ -2.03
EPHB3P54753 SNORA28-201ENST00000606769 126 ntBASIC2.38□□□□□ -2.03
EPHB3P54753 MIR8054-201ENST00000620877 86 ntBASIC2.38□□□□□ -2.03
EPHB3P54753 AC021613.1-201ENST00000623880 111 ntBASIC2.38□□□□□ -2.03
EPHB3P54753 AC095038.3-201ENST00000634439 195 ntBASIC2.38□□□□□ -2.03
EPHB3P54753 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
EPHB3P54753 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
EPHB3P54753 RNU6-23P-201ENST00000363283 107 ntBASIC2.37□□□□□ -2.03
EPHB3P54753 Y_RNA.241-201ENST00000364470 117 ntBASIC2.37□□□□□ -2.03
EPHB3P54753 Y_RNA.290-201ENST00000364879 114 ntBASIC2.37□□□□□ -2.03
EPHB3P54753 DEFA7P-201ENST00000382676 285 ntBASIC2.37□□□□□ -2.03
EPHB3P54753 Y_RNA.531-201ENST00000384589 121 ntBASIC2.37□□□□□ -2.03
EPHB3P54753 MIR221-201ENST00000385135 110 ntBASIC2.37□□□□□ -2.03
EPHB3P54753 SNORA11.4-201ENST00000408823 129 ntBASIC2.37□□□□□ -2.03
EPHB3P54753 Y_RNA.593-201ENST00000410292 98 ntBASIC2.37□□□□□ -2.03
EPHB3P54753 POLR2J4-204ENST00000418424 324 ntBASIC2.37□□□□□ -2.03
EPHB3P54753 AL512326.2-201ENST00000426359 151 ntBASIC2.37□□□□□ -2.03
EPHB3P54753 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.37□□□□□ -2.03
EPHB3P54753 AC090821.2-201ENST00000523552 176 ntBASIC2.37□□□□□ -2.03
EPHB3P54753 MIR4446-201ENST00000578505 67 ntBASIC2.37□□□□□ -2.03
EPHB3P54753 FAM71BP1-201ENST00000604431 523 ntBASIC2.37□□□□□ -2.03
EPHB3P54753 SNORD14A-201ENST00000606526 91 ntBASIC2.37□□□□□ -2.03
EPHB3P54753 MIR7843-201ENST00000622274 79 ntBASIC2.37□□□□□ -2.03
EPHB3P54753 MIR6766-201ENST00000622641 72 ntBASIC2.37□□□□□ -2.03
EPHB3P54753 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
EPHB3P54753 MIR494-201ENST00000349529 81 ntBASIC2.36□□□□□ -2.03
EPHB3P54753 MIR342-201ENST00000362212 99 ntBASIC2.36□□□□□ -2.03
EPHB3P54753 RNY1P10-201ENST00000363268 113 ntBASIC2.36□□□□□ -2.03
EPHB3P54753 Y_RNA.360-201ENST00000365512 102 ntBASIC2.36□□□□□ -2.03
EPHB3P54753 RNU6-163P-201ENST00000384396 106 ntBASIC2.36□□□□□ -2.03
EPHB3P54753 MIR577-201ENST00000385196 96 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 185.2 ms