Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CHGAP10645 AL021368.2-201ENST00000606125 5352 ntBASIC3.98□□□□□ -1.77
CHGAP10645 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.98□□□□□ -1.77
CHGAP10645 RNU6-573P-201ENST00000383938 106 ntBASIC3.98□□□□□ -1.77
CHGAP10645 MIR9-1-201ENST00000385198 89 ntBASIC3.98□□□□□ -1.77
CHGAP10645 RNU6-1275P-201ENST00000391087 107 ntBASIC3.98□□□□□ -1.77
CHGAP10645 RNU2-7P-201ENST00000410794 178 ntBASIC3.98□□□□□ -1.77
CHGAP10645 RNU7-73P-201ENST00000458743 63 ntBASIC3.98□□□□□ -1.77
CHGAP10645 RN7SL442P-201ENST00000473804 320 ntBASIC3.98□□□□□ -1.77
CHGAP10645 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.98□□□□□ -1.77
CHGAP10645 AC012531.4-201ENST00000616509 177 ntBASIC3.98□□□□□ -1.77
CHGAP10645 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CHGAP10645 SNORD45B-201ENST00000364617 72 ntBASIC3.97□□□□□ -1.77
CHGAP10645 Y_RNA.377-201ENST00000365644 108 ntBASIC3.97□□□□□ -1.77
CHGAP10645 SNORA48.1-201ENST00000390879 135 ntBASIC3.97□□□□□ -1.77
CHGAP10645 RNU6-679P-201ENST00000391003 106 ntBASIC3.97□□□□□ -1.77
CHGAP10645 SNORA26.6-201ENST00000391256 115 ntBASIC3.97□□□□□ -1.77
CHGAP10645 SNORA7.5-201ENST00000410672 110 ntBASIC3.97□□□□□ -1.77
CHGAP10645 HMGN2P3-201ENST00000433603 273 ntBASIC3.97□□□□□ -1.77
CHGAP10645 HMGN2P5-201ENST00000436882 273 ntBASIC3.97□□□□□ -1.77
CHGAP10645 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.97□□□□□ -1.77
CHGAP10645 RNVU1-2-201ENST00000516326 135 ntBASIC3.97□□□□□ -1.77
CHGAP10645 MIR548AE2-201ENST00000583456 67 ntBASIC3.97□□□□□ -1.77
CHGAP10645 MIR6717-201ENST00000622747 73 ntBASIC3.97□□□□□ -1.77
CHGAP10645 SNORA50A-202ENST00000629536 136 ntBASIC3.97□□□□□ -1.77
CHGAP10645 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
CHGAP10645 MIR494-201ENST00000349529 81 ntBASIC3.96□□□□□ -1.78
CHGAP10645 Y_RNA.470-201ENST00000384307 117 ntBASIC3.96□□□□□ -1.78
CHGAP10645 MIR518A2-201ENST00000384966 87 ntBASIC3.96□□□□□ -1.78
CHGAP10645 RNU6-644P-201ENST00000391155 98 ntBASIC3.96□□□□□ -1.78
CHGAP10645 AL353813.1-201ENST00000440700 253 ntBASIC3.96□□□□□ -1.78
CHGAP10645 RNU6-795P-201ENST00000516323 103 ntBASIC3.96□□□□□ -1.78
CHGAP10645 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.96□□□□□ -1.78
CHGAP10645 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.95□□□□□ -1.78
CHGAP10645 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.95□□□□□ -1.78
CHGAP10645 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CHGAP10645 RNU6-616P-201ENST00000384353 107 ntBASIC3.95□□□□□ -1.78
CHGAP10645 MIR512-1-201ENST00000384913 84 ntBASIC3.95□□□□□ -1.78
CHGAP10645 UBBP3-201ENST00000445497 241 ntBASIC3.95□□□□□ -1.78
CHGAP10645 AC093850.1-201ENST00000454121 251 ntBASIC3.95□□□□□ -1.78
CHGAP10645 snoU13.26-201ENST00000459452 105 ntBASIC3.95□□□□□ -1.78
CHGAP10645 Y_RNA.685-201ENST00000516532 108 ntBASIC3.95□□□□□ -1.78
CHGAP10645 AC243994.1-201ENST00000618627 109 ntBASIC3.95□□□□□ -1.78
CHGAP10645 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.94□□□□□ -1.78
CHGAP10645 RNA5SP383-201ENST00000362934 120 ntBASIC3.94□□□□□ -1.78
CHGAP10645 RNU6-1067P-201ENST00000384752 107 ntBASIC3.94□□□□□ -1.78
CHGAP10645 SNORA46-201ENST00000384762 135 ntBASIC3.94□□□□□ -1.78
CHGAP10645 RNU6-592P-201ENST00000411333 103 ntBASIC3.94□□□□□ -1.78
CHGAP10645 RNU7-34P-201ENST00000459394 64 ntBASIC3.94□□□□□ -1.78
CHGAP10645 SNORD123-201ENST00000459473 70 ntBASIC3.94□□□□□ -1.78
CHGAP10645 RNA5SP481-201ENST00000516814 122 ntBASIC3.94□□□□□ -1.78
CHGAP10645 SUB1P4-201ENST00000566062 339 ntBASIC3.94□□□□□ -1.78
CHGAP10645 MIR4709-201ENST00000577272 72 ntBASIC3.94□□□□□ -1.78
CHGAP10645 AC021506.2-201ENST00000612354 169 ntBASIC3.94□□□□□ -1.78
CHGAP10645 U7.3-201ENST00000616123 62 ntBASIC3.94□□□□□ -1.78
CHGAP10645 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CHGAP10645 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.94□□□□□ -1.78
CHGAP10645 Y_RNA.17-201ENST00000362433 111 ntBASIC3.93□□□□□ -1.78
CHGAP10645 RNY1P10-201ENST00000363268 113 ntBASIC3.93□□□□□ -1.78
CHGAP10645 MIR660-201ENST00000385235 97 ntBASIC3.93□□□□□ -1.78
CHGAP10645 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CHGAP10645 MRPL35P3-201ENST00000421557 364 ntBASIC3.93□□□□□ -1.78
CHGAP10645 RNU6-638P-201ENST00000516582 104 ntBASIC3.93□□□□□ -1.78
CHGAP10645 MIR548AR-201ENST00000582191 57 ntBASIC3.93□□□□□ -1.78
CHGAP10645 AL020996.3-201ENST00000606617 222 ntBASIC3.93□□□□□ -1.78
CHGAP10645 MIR4791-201ENST00000607666 84 ntBASIC3.93□□□□□ -1.78
CHGAP10645 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CHGAP10645 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CHGAP10645 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CHGAP10645 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CHGAP10645 RNU6-60P-201ENST00000364792 103 ntBASIC3.92□□□□□ -1.78
CHGAP10645 Y_RNA.593-201ENST00000410292 98 ntBASIC3.92□□□□□ -1.78
CHGAP10645 RNA5SP437-201ENST00000517249 129 ntBASIC3.92□□□□□ -1.78
CHGAP10645 MIR7153-201ENST00000637758 57 ntBASIC3.92□□□□□ -1.78
CHGAP10645 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CHGAP10645 Y_RNA.219-201ENST00000364232 113 ntBASIC3.91□□□□□ -1.78
CHGAP10645 RNU6-1201P-201ENST00000384227 107 ntBASIC3.91□□□□□ -1.78
CHGAP10645 RNU6-521P-201ENST00000516663 105 ntBASIC3.91□□□□□ -1.78
CHGAP10645 SNORD53-201ENST00000579969 78 ntBASIC3.91□□□□□ -1.78
CHGAP10645 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CHGAP10645 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.9□□□□□ -1.78
CHGAP10645 Y_RNA.537-201ENST00000384626 109 ntBASIC3.9□□□□□ -1.79
CHGAP10645 SNORD28B-201ENST00000390993 75 ntBASIC3.9□□□□□ -1.79
CHGAP10645 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.9□□□□□ -1.79
CHGAP10645 UQCRHP3-201ENST00000451503 251 ntBASIC3.9□□□□□ -1.79
CHGAP10645 snoU13.27-201ENST00000459278 104 ntBASIC3.9□□□□□ -1.79
CHGAP10645 MIR1270-201ENST00000459320 83 ntBASIC3.9□□□□□ -1.79
CHGAP10645 MIR4777-201ENST00000583710 86 ntBASIC3.9□□□□□ -1.79
CHGAP10645 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CHGAP10645 Y_RNA.95-201ENST00000363079 95 ntBASIC3.89□□□□□ -1.79
CHGAP10645 RNU6-112P-201ENST00000363599 104 ntBASIC3.89□□□□□ -1.79
CHGAP10645 RNU6-296P-201ENST00000384608 107 ntBASIC3.89□□□□□ -1.79
CHGAP10645 RNU6-913P-201ENST00000390913 95 ntBASIC3.89□□□□□ -1.79
CHGAP10645 HMGN2P39-201ENST00000398005 273 ntBASIC3.89□□□□□ -1.79
CHGAP10645 AL451046.2-201ENST00000403074 277 ntBASIC3.89□□□□□ -1.79
CHGAP10645 AC003982.1-202ENST00000469928 248 ntBASIC3.89□□□□□ -1.79
CHGAP10645 AC022254.1-201ENST00000567857 235 ntBASIC3.89□□□□□ -1.79
CHGAP10645 AC096720.1-201ENST00000604441 183 ntBASIC3.89□□□□□ -1.79
CHGAP10645 AC108206.1-201ENST00000570186 4159 ntBASIC3.89□□□□□ -1.79
CHGAP10645 MIR526A1-201ENST00000384897 85 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 194.2 ms