Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 SNORA79-201ENST00000408376 140 ntBASIC1.51□□□□□ -2.17
MMP3P08254 AC004223.1-201ENST00000479840 271 ntBASIC1.51□□□□□ -2.17
MMP3P08254 RNU6-693P-201ENST00000516134 107 ntBASIC1.51□□□□□ -2.17
MMP3P08254 RNU6-365P-201ENST00000517113 106 ntBASIC1.51□□□□□ -2.17
MMP3P08254 AC007751.1-201ENST00000529260 376 ntBASIC1.51□□□□□ -2.17
MMP3P08254 SNORD114-22-201ENST00000365423 72 ntBASIC1.5□□□□□ -2.17
MMP3P08254 RNU6-886P-201ENST00000384319 105 ntBASIC1.5□□□□□ -2.17
MMP3P08254 SNORD38C-201ENST00000384381 69 ntBASIC1.5□□□□□ -2.17
MMP3P08254 Y_RNA.547-201ENST00000384654 119 ntBASIC1.5□□□□□ -2.17
MMP3P08254 MIR518F-201ENST00000384973 87 ntBASIC1.5□□□□□ -2.17
MMP3P08254 RNU2-55P-201ENST00000411146 174 ntBASIC1.5□□□□□ -2.17
MMP3P08254 SNORA18.7-201ENST00000516910 131 ntBASIC1.5□□□□□ -2.17
MMP3P08254 MIR3660-201ENST00000584845 100 ntBASIC1.5□□□□□ -2.17
MMP3P08254 AC098479.1-201ENST00000609225 154 ntBASIC1.5□□□□□ -2.17
MMP3P08254 AC006441.5-201ENST00000612680 209 ntBASIC1.5□□□□□ -2.17
MMP3P08254 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
MMP3P08254 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
MMP3P08254 SNORD1A-201ENST00000364968 72 ntBASIC1.49□□□□□ -2.17
MMP3P08254 RNU4-43P-201ENST00000410628 137 ntBASIC1.49□□□□□ -2.17
MMP3P08254 RNA5SP220-201ENST00000516298 104 ntBASIC1.49□□□□□ -2.17
MMP3P08254 RNU7-181P-201ENST00000517234 74 ntBASIC1.49□□□□□ -2.17
MMP3P08254 MIR4431-201ENST00000579990 94 ntBASIC1.49□□□□□ -2.17
MMP3P08254 MIR3658-201ENST00000636291 56 ntBASIC1.49□□□□□ -2.17
MMP3P08254 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.49□□□□□ -2.17
MMP3P08254 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
MMP3P08254 Y_RNA.8-201ENST00000362353 102 ntBASIC1.48□□□□□ -2.17
MMP3P08254 SNORA1-201ENST00000384107 130 ntBASIC1.48□□□□□ -2.17
MMP3P08254 RNU6-804P-201ENST00000384286 107 ntBASIC1.48□□□□□ -2.17
MMP3P08254 MIR136-201ENST00000385207 82 ntBASIC1.48□□□□□ -2.17
MMP3P08254 SNORA40.6-201ENST00000391153 128 ntBASIC1.48□□□□□ -2.17
MMP3P08254 RNA5SP153-201ENST00000516498 76 ntBASIC1.48□□□□□ -2.17
MMP3P08254 MIR3937-201ENST00000580135 106 ntBASIC1.48□□□□□ -2.17
MMP3P08254 AC097639.2-201ENST00000603159 172 ntBASIC1.48□□□□□ -2.17
MMP3P08254 RMST_2.1-201ENST00000617263 136 ntBASIC1.48□□□□□ -2.17
MMP3P08254 MIR6734-201ENST00000621166 68 ntBASIC1.48□□□□□ -2.17
MMP3P08254 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
MMP3P08254 RNU6-312P-201ENST00000364629 107 ntBASIC1.47□□□□□ -2.17
MMP3P08254 RNU6-209P-201ENST00000384118 107 ntBASIC1.47□□□□□ -2.17
MMP3P08254 Y_RNA.521-201ENST00000384560 114 ntBASIC1.47□□□□□ -2.17
MMP3P08254 MIR570-201ENST00000384917 97 ntBASIC1.47□□□□□ -2.17
MMP3P08254 SNORD41-201ENST00000386967 70 ntBASIC1.47□□□□□ -2.17
MMP3P08254 AC079140.2-201ENST00000506193 142 ntBASIC1.47□□□□□ -2.17
MMP3P08254 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.47□□□□□ -2.17
MMP3P08254 AC107027.2-201ENST00000512197 115 ntBASIC1.47□□□□□ -2.17
MMP3P08254 RNU6-504P-201ENST00000516568 104 ntBASIC1.47□□□□□ -2.17
MMP3P08254 MIR378D2-201ENST00000580636 98 ntBASIC1.47□□□□□ -2.17
MMP3P08254 MIR3129-201ENST00000581095 76 ntBASIC1.47□□□□□ -2.17
MMP3P08254 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.47□□□□□ -2.17
MMP3P08254 RNU6-888P-201ENST00000363010 101 ntBASIC1.46□□□□□ -2.18
MMP3P08254 RNU4-84P-201ENST00000364200 139 ntBASIC1.46□□□□□ -2.18
MMP3P08254 RNU6-818P-201ENST00000364837 108 ntBASIC1.46□□□□□ -2.18
MMP3P08254 RNU6-1130P-201ENST00000365434 107 ntBASIC1.46□□□□□ -2.18
MMP3P08254 SNORA2.2-201ENST00000365473 135 ntBASIC1.46□□□□□ -2.18
MMP3P08254 Y_RNA.357-201ENST00000365487 109 ntBASIC1.46□□□□□ -2.18
MMP3P08254 SNORD24-201ENST00000383884 75 ntBASIC1.46□□□□□ -2.18
MMP3P08254 RNU6-768P-201ENST00000384683 107 ntBASIC1.46□□□□□ -2.18
MMP3P08254 SNORD28B-201ENST00000390993 75 ntBASIC1.46□□□□□ -2.18
MMP3P08254 SNORA26-201ENST00000391286 122 ntBASIC1.46□□□□□ -2.18
MMP3P08254 RNU6-1135P-201ENST00000411083 103 ntBASIC1.46□□□□□ -2.18
MMP3P08254 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.46□□□□□ -2.18
MMP3P08254 RNU1-98P-201ENST00000458992 160 ntBASIC1.46□□□□□ -2.18
MMP3P08254 SNORD123-201ENST00000459473 70 ntBASIC1.46□□□□□ -2.18
MMP3P08254 AC090049.2-201ENST00000550377 109 ntBASIC1.46□□□□□ -2.18
MMP3P08254 RNU6-978P-201ENST00000364371 103 ntBASIC1.45□□□□□ -2.18
MMP3P08254 Y_RNA.242-201ENST00000364473 110 ntBASIC1.45□□□□□ -2.18
MMP3P08254 Y_RNA.555-201ENST00000384673 110 ntBASIC1.45□□□□□ -2.18
MMP3P08254 AL451046.2-201ENST00000403074 277 ntBASIC1.45□□□□□ -2.18
MMP3P08254 RPS27P16-201ENST00000425758 201 ntBASIC1.45□□□□□ -2.18
MMP3P08254 AF228730.3-201ENST00000436691 102 ntBASIC1.45□□□□□ -2.18
MMP3P08254 RNU4-57P-201ENST00000515980 135 ntBASIC1.45□□□□□ -2.18
MMP3P08254 RNA5SP61-201ENST00000516453 100 ntBASIC1.45□□□□□ -2.18
MMP3P08254 SNORD36C-201ENST00000516733 66 ntBASIC1.45□□□□□ -2.18
MMP3P08254 MIR376A2-201ENST00000636782 80 ntBASIC1.45□□□□□ -2.18
MMP3P08254 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
MMP3P08254 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.45□□□□□ -2.18
MMP3P08254 SNORD115-28-201ENST00000363931 81 ntBASIC1.44□□□□□ -2.18
MMP3P08254 Y_RNA.272-201ENST00000364696 102 ntBASIC1.44□□□□□ -2.18
MMP3P08254 SNORD116-18-201ENST00000383961 92 ntBASIC1.44□□□□□ -2.18
MMP3P08254 MIR653-201ENST00000385279 96 ntBASIC1.44□□□□□ -2.18
MMP3P08254 U8.17-201ENST00000391292 132 ntBASIC1.44□□□□□ -2.18
MMP3P08254 AC027119.1-201ENST00000440877 241 ntBASIC1.44□□□□□ -2.18
MMP3P08254 RPS29P29-201ENST00000456396 171 ntBASIC1.44□□□□□ -2.18
MMP3P08254 RNU6-947P-201ENST00000516264 106 ntBASIC1.44□□□□□ -2.18
MMP3P08254 SNORD116-25-201ENST00000516517 92 ntBASIC1.44□□□□□ -2.18
MMP3P08254 AL160236.1-201ENST00000556317 195 ntBASIC1.44□□□□□ -2.18
MMP3P08254 AC021753.1-201ENST00000635724 168 ntBASIC1.44□□□□□ -2.18
MMP3P08254 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
MMP3P08254 MIR96-201ENST00000362288 78 ntBASIC1.43□□□□□ -2.18
MMP3P08254 Y_RNA.37-201ENST00000362606 108 ntBASIC1.43□□□□□ -2.18
MMP3P08254 Y_RNA.398-201ENST00000383952 99 ntBASIC1.43□□□□□ -2.18
MMP3P08254 Y_RNA.441-201ENST00000384123 112 ntBASIC1.43□□□□□ -2.18
MMP3P08254 Y_RNA.494-201ENST00000384432 111 ntBASIC1.43□□□□□ -2.18
MMP3P08254 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
MMP3P08254 RNU6-239P-201ENST00000390990 99 ntBASIC1.43□□□□□ -2.18
MMP3P08254 RNU6-938P-201ENST00000411285 103 ntBASIC1.43□□□□□ -2.18
MMP3P08254 SNX2P2-201ENST00000424553 323 ntBASIC1.43□□□□□ -2.18
MMP3P08254 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.43□□□□□ -2.18
MMP3P08254 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.43□□□□□ -2.18
MMP3P08254 RNU6-322P-201ENST00000516010 103 ntBASIC1.43□□□□□ -2.18
MMP3P08254 SNORD111.1-201ENST00000516421 86 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 189.6 ms