Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 RNU6-388P-201ENST00000517012 105 ntBASIC1.34□□□□□ -2.19
SYNCRIPO60506 RNU6-389P-201ENST00000517048 105 ntBASIC1.34□□□□□ -2.19
SYNCRIPO60506 MIR4308-201ENST00000580634 81 ntBASIC1.34□□□□□ -2.19
SYNCRIPO60506 AL049861.1-201ENST00000603130 150 ntBASIC1.34□□□□□ -2.19
SYNCRIPO60506 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SYNCRIPO60506 Y_RNA.83-201ENST00000363005 113 ntBASIC1.33□□□□□ -2.2
SYNCRIPO60506 RNU6-268P-201ENST00000364174 107 ntBASIC1.33□□□□□ -2.2
SYNCRIPO60506 Y_RNA.257-201ENST00000364596 102 ntBASIC1.33□□□□□ -2.2
SYNCRIPO60506 RNU1-93P-201ENST00000364704 169 ntBASIC1.33□□□□□ -2.2
SYNCRIPO60506 RNU6-484P-201ENST00000384016 107 ntBASIC1.33□□□□□ -2.2
SYNCRIPO60506 Y_RNA.515-201ENST00000384535 112 ntBASIC1.33□□□□□ -2.2
SYNCRIPO60506 MIR150-201ENST00000385048 84 ntBASIC1.33□□□□□ -2.2
SYNCRIPO60506 RNU6-918P-201ENST00000391219 106 ntBASIC1.33□□□□□ -2.2
SYNCRIPO60506 RNU4-43P-201ENST00000410628 137 ntBASIC1.33□□□□□ -2.2
SYNCRIPO60506 RNY3P16-201ENST00000516338 101 ntBASIC1.33□□□□□ -2.2
SYNCRIPO60506 RNA5SP153-201ENST00000516498 76 ntBASIC1.33□□□□□ -2.2
SYNCRIPO60506 RNU6-453P-201ENST00000516819 85 ntBASIC1.33□□□□□ -2.2
SYNCRIPO60506 AC090142.3-201ENST00000519012 385 ntBASIC1.33□□□□□ -2.2
SYNCRIPO60506 AC036111.3-201ENST00000526389 112 ntBASIC1.33□□□□□ -2.2
SYNCRIPO60506 FAM106DP-201ENST00000586416 501 ntBASIC1.33□□□□□ -2.2
SYNCRIPO60506 AC078938.1-201ENST00000620993 318 ntBASIC1.33□□□□□ -2.2
SYNCRIPO60506 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
SYNCRIPO60506 MIR96-201ENST00000362288 78 ntBASIC1.32□□□□□ -2.2
SYNCRIPO60506 Y_RNA.7-201ENST00000362352 102 ntBASIC1.32□□□□□ -2.2
SYNCRIPO60506 RNU6-200P-201ENST00000364743 107 ntBASIC1.32□□□□□ -2.2
SYNCRIPO60506 Y_RNA.308-201ENST00000365043 101 ntBASIC1.32□□□□□ -2.2
SYNCRIPO60506 RNU6-53P-201ENST00000365367 106 ntBASIC1.32□□□□□ -2.2
SYNCRIPO60506 RNU6-939P-201ENST00000384634 107 ntBASIC1.32□□□□□ -2.2
SYNCRIPO60506 MIR520E-201ENST00000384867 87 ntBASIC1.32□□□□□ -2.2
SYNCRIPO60506 MT-TT-201ENST00000387460 66 ntBASIC1.32□□□□□ -2.2
SYNCRIPO60506 SNORA40.6-201ENST00000391153 128 ntBASIC1.32□□□□□ -2.2
SYNCRIPO60506 AC015922.2-201ENST00000435593 184 ntBASIC1.32□□□□□ -2.2
SYNCRIPO60506 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.32□□□□□ -2.2
SYNCRIPO60506 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
SYNCRIPO60506 RNA5SP327-201ENST00000362494 101 ntBASIC1.31□□□□□ -2.2
SYNCRIPO60506 Y_RNA.274-201ENST00000364714 101 ntBASIC1.31□□□□□ -2.2
SYNCRIPO60506 MIR15B-201ENST00000385045 98 ntBASIC1.31□□□□□ -2.2
SYNCRIPO60506 SNORD41-201ENST00000386967 70 ntBASIC1.31□□□□□ -2.2
SYNCRIPO60506 MIR758-201ENST00000390227 88 ntBASIC1.31□□□□□ -2.2
SYNCRIPO60506 Y_RNA.587-201ENST00000391210 103 ntBASIC1.31□□□□□ -2.2
SYNCRIPO60506 AL606845.1-201ENST00000404881 255 ntBASIC1.31□□□□□ -2.2
SYNCRIPO60506 MIR548J-201ENST00000408833 112 ntBASIC1.31□□□□□ -2.2
SYNCRIPO60506 SNRPGP8-201ENST00000454064 226 ntBASIC1.31□□□□□ -2.2
SYNCRIPO60506 RNU6-794P-201ENST00000517261 64 ntBASIC1.31□□□□□ -2.2
SYNCRIPO60506 MIR4744-201ENST00000581563 82 ntBASIC1.31□□□□□ -2.2
SYNCRIPO60506 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SYNCRIPO60506 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
SYNCRIPO60506 Y_RNA.115-201ENST00000363272 98 ntBASIC1.3□□□□□ -2.2
SYNCRIPO60506 RNA5SP62-201ENST00000363457 110 ntBASIC1.3□□□□□ -2.2
SYNCRIPO60506 SNORD24-201ENST00000383884 75 ntBASIC1.3□□□□□ -2.2
SYNCRIPO60506 Y_RNA.785-201ENST00000384290 109 ntBASIC1.3□□□□□ -2.2
SYNCRIPO60506 Y_RNA.486-201ENST00000384398 107 ntBASIC1.3□□□□□ -2.2
SYNCRIPO60506 Y_RNA.571-201ENST00000384753 98 ntBASIC1.3□□□□□ -2.2
SYNCRIPO60506 MIR136-201ENST00000385207 82 ntBASIC1.3□□□□□ -2.2
SYNCRIPO60506 MIR618-201ENST00000385287 98 ntBASIC1.3□□□□□ -2.2
SYNCRIPO60506 AC004223.1-201ENST00000479840 271 ntBASIC1.3□□□□□ -2.2
SYNCRIPO60506 RNU6-922P-201ENST00000516753 99 ntBASIC1.3□□□□□ -2.2
SYNCRIPO60506 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.3□□□□□ -2.2
SYNCRIPO60506 MIR1273G-201ENST00000577677 100 ntBASIC1.3□□□□□ -2.2
SYNCRIPO60506 Pinc.1-201ENST00000616452 154 ntBASIC1.3□□□□□ -2.2
SYNCRIPO60506 RNU6-35P-201ENST00000384530 107 ntBASIC1.29□□□□□ -2.2
SYNCRIPO60506 MIR193B-201ENST00000384907 83 ntBASIC1.29□□□□□ -2.2
SYNCRIPO60506 RNU6-578P-201ENST00000390980 103 ntBASIC1.29□□□□□ -2.2
SYNCRIPO60506 SNORA26-201ENST00000391286 122 ntBASIC1.29□□□□□ -2.2
SYNCRIPO60506 RNU6-493P-201ENST00000391321 108 ntBASIC1.29□□□□□ -2.2
SYNCRIPO60506 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.29□□□□□ -2.2
SYNCRIPO60506 RNU6-138P-201ENST00000515952 107 ntBASIC1.29□□□□□ -2.2
SYNCRIPO60506 RNU6-322P-201ENST00000516010 103 ntBASIC1.29□□□□□ -2.2
SYNCRIPO60506 MIR3660-201ENST00000584845 100 ntBASIC1.29□□□□□ -2.2
SYNCRIPO60506 GHRLOS.1-201ENST00000610995 70 ntBASIC1.29□□□□□ -2.2
SYNCRIPO60506 AC108706.1-201ENST00000611053 297 ntBASIC1.29□□□□□ -2.2
SYNCRIPO60506 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
SYNCRIPO60506 Y_RNA.66-201ENST00000362862 102 ntBASIC1.28□□□□□ -2.2
SYNCRIPO60506 Y_RNA.75-201ENST00000362927 97 ntBASIC1.28□□□□□ -2.2
SYNCRIPO60506 Y_RNA.85-201ENST00000363014 111 ntBASIC1.28□□□□□ -2.2
SYNCRIPO60506 SNORD45.3-201ENST00000363836 72 ntBASIC1.28□□□□□ -2.2
SYNCRIPO60506 RNU6-923P-201ENST00000364753 107 ntBASIC1.28□□□□□ -2.2
SYNCRIPO60506 Y_RNA.634-201ENST00000364811 113 ntBASIC1.28□□□□□ -2.2
SYNCRIPO60506 Y_RNA.297-201ENST00000364950 91 ntBASIC1.28□□□□□ -2.2
SYNCRIPO60506 SNORD38C-201ENST00000384381 69 ntBASIC1.28□□□□□ -2.2
SYNCRIPO60506 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.28□□□□□ -2.2
SYNCRIPO60506 Y_RNA.644-201ENST00000459006 113 ntBASIC1.28□□□□□ -2.2
SYNCRIPO60506 RNU6-1299P-201ENST00000516316 100 ntBASIC1.28□□□□□ -2.2
SYNCRIPO60506 Y_RNA.674-201ENST00000516362 113 ntBASIC1.28□□□□□ -2.2
SYNCRIPO60506 RNU7-40P-201ENST00000516397 64 ntBASIC1.28□□□□□ -2.2
SYNCRIPO60506 SNORA74.3-201ENST00000517108 154 ntBASIC1.28□□□□□ -2.2
SYNCRIPO60506 AC109810.1-201ENST00000534066 224 ntBASIC1.28□□□□□ -2.2
SYNCRIPO60506 MIR3671-201ENST00000580455 88 ntBASIC1.28□□□□□ -2.2
SYNCRIPO60506 MIR6086-201ENST00000638065 55 ntBASIC1.28□□□□□ -2.2
SYNCRIPO60506 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
SYNCRIPO60506 RNU6-888P-201ENST00000363010 101 ntBASIC1.27□□□□□ -2.21
SYNCRIPO60506 RNA5SP257-201ENST00000363023 116 ntBASIC1.27□□□□□ -2.21
SYNCRIPO60506 RNU6-1020P-201ENST00000363684 107 ntBASIC1.27□□□□□ -2.21
SYNCRIPO60506 RNU6-275P-201ENST00000364910 107 ntBASIC1.27□□□□□ -2.21
SYNCRIPO60506 RNU6-728P-201ENST00000365375 104 ntBASIC1.27□□□□□ -2.21
SYNCRIPO60506 RNU6-47P-201ENST00000383866 107 ntBASIC1.27□□□□□ -2.21
SYNCRIPO60506 Y_RNA.432-201ENST00000384087 111 ntBASIC1.27□□□□□ -2.21
SYNCRIPO60506 RNU4-70P-201ENST00000384579 139 ntBASIC1.27□□□□□ -2.21
SYNCRIPO60506 MIR548A2-201ENST00000384956 97 ntBASIC1.27□□□□□ -2.21
SYNCRIPO60506 AL451046.2-201ENST00000403074 277 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 237.3 ms