Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 RNU6-985P-201ENST00000410182 104 ntBASIC0.57□□□□□ -2.32
MSH4O15457 MTATP8P1-201ENST00000467115 207 ntBASIC0.57□□□□□ -2.32
MSH4O15457 Y_RNA.666-201ENST00000516187 112 ntBASIC0.57□□□□□ -2.32
MSH4O15457 RNU7-25P-201ENST00000516544 62 ntBASIC0.57□□□□□ -2.32
MSH4O15457 SNORA27.4-201ENST00000516650 95 ntBASIC0.57□□□□□ -2.32
MSH4O15457 MIR2115-201ENST00000516657 100 ntBASIC0.57□□□□□ -2.32
MSH4O15457 RNU7-149P-201ENST00000516739 59 ntBASIC0.57□□□□□ -2.32
MSH4O15457 MIR4711-201ENST00000578274 70 ntBASIC0.57□□□□□ -2.32
MSH4O15457 AC037487.3-201ENST00000606668 112 ntBASIC0.57□□□□□ -2.32
MSH4O15457 AC022140.2-201ENST00000623500 188 ntBASIC0.57□□□□□ -2.32
MSH4O15457 MIR367-201ENST00000362299 68 ntBASIC0.56□□□□□ -2.32
MSH4O15457 Y_RNA.24-201ENST00000362508 103 ntBASIC0.56□□□□□ -2.32
MSH4O15457 RNU6-238P-201ENST00000363313 106 ntBASIC0.56□□□□□ -2.32
MSH4O15457 RNU6-144P-201ENST00000383951 107 ntBASIC0.56□□□□□ -2.32
MSH4O15457 Y_RNA.494-201ENST00000384432 111 ntBASIC0.56□□□□□ -2.32
MSH4O15457 Y_RNA.587-201ENST00000391210 103 ntBASIC0.56□□□□□ -2.32
MSH4O15457 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.56□□□□□ -2.32
MSH4O15457 RNU6-733P-201ENST00000410759 104 ntBASIC0.56□□□□□ -2.32
MSH4O15457 RNU6-651P-201ENST00000411040 105 ntBASIC0.56□□□□□ -2.32
MSH4O15457 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.56□□□□□ -2.32
MSH4O15457 RNU4-57P-201ENST00000515980 135 ntBASIC0.56□□□□□ -2.32
MSH4O15457 RNU6-1338P-201ENST00000516328 91 ntBASIC0.56□□□□□ -2.32
MSH4O15457 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.56□□□□□ -2.32
MSH4O15457 MIR4724-201ENST00000579485 89 ntBASIC0.56□□□□□ -2.32
MSH4O15457 MIR548AO-201ENST00000579992 96 ntBASIC0.56□□□□□ -2.32
MSH4O15457 AC044792.1-201ENST00000593294 196 ntBASIC0.56□□□□□ -2.32
MSH4O15457 AC006441.5-201ENST00000612680 209 ntBASIC0.56□□□□□ -2.32
MSH4O15457 uc_338.4-201ENST00000616635 176 ntBASIC0.56□□□□□ -2.32
MSH4O15457 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
MSH4O15457 Y_RNA.152-201ENST00000363578 100 ntBASIC0.55□□□□□ -2.32
MSH4O15457 Y_RNA.217-201ENST00000364214 105 ntBASIC0.55□□□□□ -2.32
MSH4O15457 RNU6-639P-201ENST00000384074 107 ntBASIC0.55□□□□□ -2.32
MSH4O15457 SNORA51.10-201ENST00000384418 136 ntBASIC0.55□□□□□ -2.32
MSH4O15457 Y_RNA.547-201ENST00000384654 119 ntBASIC0.55□□□□□ -2.32
MSH4O15457 MIR548O-201ENST00000408583 114 ntBASIC0.55□□□□□ -2.32
MSH4O15457 RNU6-613P-201ENST00000410412 108 ntBASIC0.55□□□□□ -2.32
MSH4O15457 RNU6-1203P-201ENST00000410703 110 ntBASIC0.55□□□□□ -2.32
MSH4O15457 AL731563.1-201ENST00000442202 214 ntBASIC0.55□□□□□ -2.32
MSH4O15457 AL157398.1-201ENST00000452981 186 ntBASIC0.55□□□□□ -2.32
MSH4O15457 AC023449.1-201ENST00000454464 154 ntBASIC0.55□□□□□ -2.32
MSH4O15457 Y_RNA.641-201ENST00000459414 105 ntBASIC0.55□□□□□ -2.32
MSH4O15457 SERF1AP1-201ENST00000514575 187 ntBASIC0.55□□□□□ -2.32
MSH4O15457 RNU6-1007P-201ENST00000516586 107 ntBASIC0.55□□□□□ -2.32
MSH4O15457 RNU6-229P-201ENST00000516614 102 ntBASIC0.55□□□□□ -2.32
MSH4O15457 AP003072.1-201ENST00000531740 145 ntBASIC0.55□□□□□ -2.32
MSH4O15457 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.55□□□□□ -2.32
MSH4O15457 MIR4791-201ENST00000607666 84 ntBASIC0.55□□□□□ -2.32
MSH4O15457 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
MSH4O15457 AC243829.3-201ENST00000622177 108 ntBASIC0.55□□□□□ -2.32
MSH4O15457 MTND1P7-201ENST00000632801 297 ntBASIC0.55□□□□□ -2.32
MSH4O15457 Y_RNA.276-201ENST00000364732 109 ntBASIC0.54□□□□□ -2.32
MSH4O15457 RNU6-1227P-201ENST00000383981 107 ntBASIC0.54□□□□□ -2.32
MSH4O15457 RNU6-211P-201ENST00000384047 107 ntBASIC0.54□□□□□ -2.32
MSH4O15457 Y_RNA.486-201ENST00000384398 107 ntBASIC0.54□□□□□ -2.32
MSH4O15457 RNU6-1289P-201ENST00000384431 106 ntBASIC0.54□□□□□ -2.32
MSH4O15457 MIR1827-201ENST00000408549 66 ntBASIC0.54□□□□□ -2.32
MSH4O15457 RNU6-635P-201ENST00000516651 102 ntBASIC0.54□□□□□ -2.32
MSH4O15457 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.54□□□□□ -2.32
MSH4O15457 AC011195.1-201ENST00000578177 177 ntBASIC0.54□□□□□ -2.32
MSH4O15457 AC006006.1-201ENST00000603082 144 ntBASIC0.54□□□□□ -2.32
MSH4O15457 AL021707.8-201ENST00000609428 183 ntBASIC0.54□□□□□ -2.32
MSH4O15457 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.54□□□□□ -2.32
MSH4O15457 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
MSH4O15457 MIR1-1-201ENST00000362147 71 ntBASIC0.53□□□□□ -2.32
MSH4O15457 Y_RNA.237-201ENST00000364439 102 ntBASIC0.53□□□□□ -2.32
MSH4O15457 RNU6-396P-201ENST00000365369 105 ntBASIC0.53□□□□□ -2.32
MSH4O15457 Y_RNA.376-201ENST00000365638 108 ntBASIC0.53□□□□□ -2.32
MSH4O15457 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
MSH4O15457 Y_RNA.537-201ENST00000384626 109 ntBASIC0.53□□□□□ -2.32
MSH4O15457 SNORD105-201ENST00000386910 85 ntBASIC0.53□□□□□ -2.32
MSH4O15457 RNU1-119P-201ENST00000391122 165 ntBASIC0.53□□□□□ -2.32
MSH4O15457 RNU6-1109P-201ENST00000391187 107 ntBASIC0.53□□□□□ -2.32
MSH4O15457 MTCO2P24-201ENST00000515611 426 ntBASIC0.53□□□□□ -2.32
MSH4O15457 RNU6-1143P-201ENST00000516125 104 ntBASIC0.53□□□□□ -2.32
MSH4O15457 AC007751.1-201ENST00000529260 376 ntBASIC0.53□□□□□ -2.32
MSH4O15457 AP001282.2-201ENST00000616149 309 ntBASIC0.53□□□□□ -2.32
MSH4O15457 MIR5087-201ENST00000635826 76 ntBASIC0.53□□□□□ -2.32
MSH4O15457 Y_RNA.168-201ENST00000363740 102 ntBASIC0.52□□□□□ -2.33
MSH4O15457 Y_RNA.242-201ENST00000364473 110 ntBASIC0.52□□□□□ -2.33
MSH4O15457 RNU6-740P-201ENST00000364734 105 ntBASIC0.52□□□□□ -2.33
MSH4O15457 SNORA1.2-201ENST00000365189 134 ntBASIC0.52□□□□□ -2.33
MSH4O15457 MT-TT-201ENST00000387460 66 ntBASIC0.52□□□□□ -2.33
MSH4O15457 RNU6-205P-201ENST00000390858 107 ntBASIC0.52□□□□□ -2.33
MSH4O15457 RNA5SP496-201ENST00000391240 109 ntBASIC0.52□□□□□ -2.33
MSH4O15457 AC090844.1-201ENST00000422019 156 ntBASIC0.52□□□□□ -2.33
MSH4O15457 AC244098.3-201ENST00000424803 96 ntBASIC0.52□□□□□ -2.33
MSH4O15457 snoU13.21-201ENST00000459368 105 ntBASIC0.52□□□□□ -2.33
MSH4O15457 TRBVB-201ENST00000477100 408 ntBASIC0.52□□□□□ -2.33
MSH4O15457 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
MSH4O15457 Y_RNA.802-201ENST00000614892 130 ntBASIC0.52□□□□□ -2.33
MSH4O15457 AC243994.1-201ENST00000618627 109 ntBASIC0.52□□□□□ -2.33
MSH4O15457 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
MSH4O15457 UBE2WP1-201ENST00000362030 340 ntBASIC0.51□□□□□ -2.33
MSH4O15457 Y_RNA.205-201ENST00000364128 113 ntBASIC0.51□□□□□ -2.33
MSH4O15457 Y_RNA.241-201ENST00000364470 117 ntBASIC0.51□□□□□ -2.33
MSH4O15457 Y_RNA.275-201ENST00000364726 110 ntBASIC0.51□□□□□ -2.33
MSH4O15457 MT-TW-201ENST00000387382 68 ntBASIC0.51□□□□□ -2.33
MSH4O15457 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
MSH4O15457 AC015818.7-201ENST00000428754 109 ntBASIC0.51□□□□□ -2.33
MSH4O15457 AC087499.7-201ENST00000441958 109 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 287.6 ms