Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC004467.1-201ENST00000615678 330 ntBASIC-1.8□□□□□ -2.7
CHKB-CPT1BH3BT56 AL354950.2-201ENST00000617939 290 ntBASIC-1.8□□□□□ -2.7
CHKB-CPT1BH3BT56 MIR4320-201ENST00000636981 65 ntBASIC-1.8□□□□□ -2.7
CHKB-CPT1BH3BT56 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.81□□□□□ -2.7
CHKB-CPT1BH3BT56 RNA5SP133-201ENST00000363368 119 ntBASIC-1.81□□□□□ -2.7
CHKB-CPT1BH3BT56 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.81□□□□□ -2.7
CHKB-CPT1BH3BT56 RNU6-973P-201ENST00000364690 107 ntBASIC-1.81□□□□□ -2.7
CHKB-CPT1BH3BT56 RNU6-831P-201ENST00000384548 107 ntBASIC-1.81□□□□□ -2.7
CHKB-CPT1BH3BT56 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.81□□□□□ -2.7
CHKB-CPT1BH3BT56 MIR7-2-201ENST00000384970 110 ntBASIC-1.81□□□□□ -2.7
CHKB-CPT1BH3BT56 AL606923.1-201ENST00000406616 190 ntBASIC-1.81□□□□□ -2.7
CHKB-CPT1BH3BT56 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.81□□□□□ -2.7
CHKB-CPT1BH3BT56 AC093423.1-201ENST00000440817 142 ntBASIC-1.81□□□□□ -2.7
CHKB-CPT1BH3BT56 ACA59.1-201ENST00000515966 143 ntBASIC-1.81□□□□□ -2.7
CHKB-CPT1BH3BT56 Y_RNA.673-201ENST00000516306 88 ntBASIC-1.81□□□□□ -2.7
CHKB-CPT1BH3BT56 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.81□□□□□ -2.7
CHKB-CPT1BH3BT56 DLEU2_5.1-201ENST00000615567 84 ntBASIC-1.81□□□□□ -2.7
CHKB-CPT1BH3BT56 RNU6-500P-201ENST00000362349 107 ntBASIC-1.82□□□□□ -2.7
CHKB-CPT1BH3BT56 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.82□□□□□ -2.7
CHKB-CPT1BH3BT56 RNU5F-7P-201ENST00000363696 115 ntBASIC-1.82□□□□□ -2.7
CHKB-CPT1BH3BT56 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.82□□□□□ -2.7
CHKB-CPT1BH3BT56 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.82□□□□□ -2.7
CHKB-CPT1BH3BT56 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.82□□□□□ -2.7
CHKB-CPT1BH3BT56 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.82□□□□□ -2.7
CHKB-CPT1BH3BT56 AC245014.2-201ENST00000603689 287 ntBASIC-1.82□□□□□ -2.7
CHKB-CPT1BH3BT56 AC092954.2-201ENST00000609103 430 ntBASIC-1.82□□□□□ -2.7
CHKB-CPT1BH3BT56 RNU4-50P-201ENST00000364361 141 ntBASIC-1.83□□□□□ -2.7
CHKB-CPT1BH3BT56 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.83□□□□□ -2.7
CHKB-CPT1BH3BT56 RNU6-636P-201ENST00000384598 107 ntBASIC-1.83□□□□□ -2.7
CHKB-CPT1BH3BT56 MIR599-201ENST00000385069 95 ntBASIC-1.83□□□□□ -2.7
CHKB-CPT1BH3BT56 MTND3P8-201ENST00000412909 339 ntBASIC-1.83□□□□□ -2.7
CHKB-CPT1BH3BT56 SNORD36C-201ENST00000516733 66 ntBASIC-1.83□□□□□ -2.7
CHKB-CPT1BH3BT56 snoU83B.1-201ENST00000517136 88 ntBASIC-1.83□□□□□ -2.7
CHKB-CPT1BH3BT56 AL118558.2-201ENST00000556294 238 ntBASIC-1.83□□□□□ -2.7
CHKB-CPT1BH3BT56 MTND5P40-201ENST00000559945 246 ntBASIC-1.83□□□□□ -2.7
CHKB-CPT1BH3BT56 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.83□□□□□ -2.7
CHKB-CPT1BH3BT56 MIR7844-201ENST00000616161 122 ntBASIC-1.83□□□□□ -2.7
CHKB-CPT1BH3BT56 SNORD115-25-201ENST00000362619 82 ntBASIC-1.84□□□□□ -2.7
CHKB-CPT1BH3BT56 MIR1278-201ENST00000408753 81 ntBASIC-1.84□□□□□ -2.7
CHKB-CPT1BH3BT56 RNU7-45P-201ENST00000459460 63 ntBASIC-1.84□□□□□ -2.7
CHKB-CPT1BH3BT56 AP003733.2-201ENST00000529409 171 ntBASIC-1.84□□□□□ -2.7
CHKB-CPT1BH3BT56 AC055872.1-201ENST00000570978 278 ntBASIC-1.84□□□□□ -2.7
CHKB-CPT1BH3BT56 AC018638.8-201ENST00000588755 281 ntBASIC-1.84□□□□□ -2.7
CHKB-CPT1BH3BT56 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-1.84□□□□□ -2.7
CHKB-CPT1BH3BT56 RNU6-181P-201ENST00000363225 107 ntBASIC-1.85□□□□□ -2.71
CHKB-CPT1BH3BT56 RNU6-595P-201ENST00000363944 107 ntBASIC-1.85□□□□□ -2.71
CHKB-CPT1BH3BT56 RNU6-879P-201ENST00000364328 108 ntBASIC-1.85□□□□□ -2.71
CHKB-CPT1BH3BT56 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.85□□□□□ -2.71
CHKB-CPT1BH3BT56 RNU6-996P-201ENST00000365438 107 ntBASIC-1.85□□□□□ -2.71
CHKB-CPT1BH3BT56 Y_RNA.378-201ENST00000365652 113 ntBASIC-1.85□□□□□ -2.71
CHKB-CPT1BH3BT56 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.85□□□□□ -2.71
CHKB-CPT1BH3BT56 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.85□□□□□ -2.71
CHKB-CPT1BH3BT56 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.85□□□□□ -2.71
CHKB-CPT1BH3BT56 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-1.85□□□□□ -2.71
CHKB-CPT1BH3BT56 AC244090.1-201ENST00000441884 93 ntBASIC-1.85□□□□□ -2.71
CHKB-CPT1BH3BT56 AC097635.1-201ENST00000450678 155 ntBASIC-1.85□□□□□ -2.71
CHKB-CPT1BH3BT56 RNU6-436P-201ENST00000516171 114 ntBASIC-1.85□□□□□ -2.71
CHKB-CPT1BH3BT56 RNU7-13P-201ENST00000516413 62 ntBASIC-1.85□□□□□ -2.71
CHKB-CPT1BH3BT56 RNU6-1038P-201ENST00000516516 104 ntBASIC-1.85□□□□□ -2.71
CHKB-CPT1BH3BT56 RNU6-445P-201ENST00000516949 107 ntBASIC-1.85□□□□□ -2.71
CHKB-CPT1BH3BT56 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.85□□□□□ -2.71
CHKB-CPT1BH3BT56 MIR5704-201ENST00000584029 77 ntBASIC-1.85□□□□□ -2.71
CHKB-CPT1BH3BT56 AC060780.3-201ENST00000589464 80 ntBASIC-1.85□□□□□ -2.71
CHKB-CPT1BH3BT56 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.86□□□□□ -2.71
CHKB-CPT1BH3BT56 RNU6-1120P-201ENST00000362988 108 ntBASIC-1.86□□□□□ -2.71
CHKB-CPT1BH3BT56 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.86□□□□□ -2.71
CHKB-CPT1BH3BT56 SNORD115-35-201ENST00000365122 82 ntBASIC-1.86□□□□□ -2.71
CHKB-CPT1BH3BT56 RNU6-318P-201ENST00000384283 103 ntBASIC-1.86□□□□□ -2.71
CHKB-CPT1BH3BT56 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.86□□□□□ -2.71
CHKB-CPT1BH3BT56 SNORA49-201ENST00000386157 136 ntBASIC-1.86□□□□□ -2.71
CHKB-CPT1BH3BT56 MTATP6P13-201ENST00000438531 667 ntBASIC-1.86□□□□□ -2.71
CHKB-CPT1BH3BT56 MTND1P27-201ENST00000451117 902 ntBASIC-1.86□□□□□ -2.71
CHKB-CPT1BH3BT56 RNU7-115P-201ENST00000516433 55 ntBASIC-1.86□□□□□ -2.71
CHKB-CPT1BH3BT56 RNU2-31P-201ENST00000516954 155 ntBASIC-1.86□□□□□ -2.71
CHKB-CPT1BH3BT56 RNU7-10P-201ENST00000607194 63 ntBASIC-1.86□□□□□ -2.71
CHKB-CPT1BH3BT56 AC008536.2-201ENST00000607284 349 ntBASIC-1.86□□□□□ -2.71
CHKB-CPT1BH3BT56 DISC2.1-201ENST00000612827 205 ntBASIC-1.86□□□□□ -2.71
CHKB-CPT1BH3BT56 U6.109-201ENST00000636749 87 ntBASIC-1.86□□□□□ -2.71
CHKB-CPT1BH3BT56 MIR6086-201ENST00000638065 55 ntBASIC-1.86□□□□□ -2.71
CHKB-CPT1BH3BT56 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.87□□□□□ -2.71
CHKB-CPT1BH3BT56 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.87□□□□□ -2.71
CHKB-CPT1BH3BT56 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.87□□□□□ -2.71
CHKB-CPT1BH3BT56 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.87□□□□□ -2.71
CHKB-CPT1BH3BT56 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.87□□□□□ -2.71
CHKB-CPT1BH3BT56 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.87□□□□□ -2.71
CHKB-CPT1BH3BT56 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.87□□□□□ -2.71
CHKB-CPT1BH3BT56 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.87□□□□□ -2.71
CHKB-CPT1BH3BT56 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.87□□□□□ -2.71
CHKB-CPT1BH3BT56 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.87□□□□□ -2.71
CHKB-CPT1BH3BT56 SNORD57-201ENST00000448188 72 ntBASIC-1.87□□□□□ -2.71
CHKB-CPT1BH3BT56 Y_RNA.654-201ENST00000497848 106 ntBASIC-1.87□□□□□ -2.71
CHKB-CPT1BH3BT56 AC122108.2-201ENST00000611946 526 ntBASIC-1.87□□□□□ -2.71
CHKB-CPT1BH3BT56 MIR6854-201ENST00000614935 69 ntBASIC-1.87□□□□□ -2.71
CHKB-CPT1BH3BT56 RNU6-128P-201ENST00000383976 107 ntBASIC-1.88□□□□□ -2.71
CHKB-CPT1BH3BT56 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.88□□□□□ -2.71
CHKB-CPT1BH3BT56 MIR517A-201ENST00000385001 87 ntBASIC-1.88□□□□□ -2.71
CHKB-CPT1BH3BT56 HLA-S-202ENST00000425174 53 ntBASIC-1.88□□□□□ -2.71
CHKB-CPT1BH3BT56 RNU7-63P-201ENST00000459054 62 ntBASIC-1.88□□□□□ -2.71
CHKB-CPT1BH3BT56 MTND3P7-201ENST00000474435 343 ntBASIC-1.88□□□□□ -2.71
CHKB-CPT1BH3BT56 SERF1AP1-201ENST00000514575 187 ntBASIC-1.88□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms