Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 SNORA40.6-201ENST00000391153 128 ntBASIC1.04□□□□□ -2.24
Q9N2K0 MIR548O-201ENST00000408583 114 ntBASIC1.04□□□□□ -2.24
Q9N2K0 RNU2-38P-201ENST00000410856 79 ntBASIC1.04□□□□□ -2.24
Q9N2K0 AC063976.4-201ENST00000421971 163 ntBASIC1.04□□□□□ -2.24
Q9N2K0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.04□□□□□ -2.24
Q9N2K0 AC087499.4-201ENST00000448505 178 ntBASIC1.04□□□□□ -2.24
Q9N2K0 RNU6-1132P-201ENST00000459214 107 ntBASIC1.04□□□□□ -2.24
Q9N2K0 RNU7-95P-201ENST00000459222 64 ntBASIC1.04□□□□□ -2.24
Q9N2K0 RPS23P4-201ENST00000487908 423 ntBASIC1.04□□□□□ -2.24
Q9N2K0 AC005840.1-201ENST00000498412 377 ntBASIC1.04□□□□□ -2.24
Q9N2K0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.04□□□□□ -2.24
Q9N2K0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.04□□□□□ -2.24
Q9N2K0 TRMT112P2-201ENST00000512910 132 ntBASIC1.04□□□□□ -2.24
Q9N2K0 RNU1-92P-201ENST00000517017 135 ntBASIC1.04□□□□□ -2.24
Q9N2K0 AC090821.2-201ENST00000523552 176 ntBASIC1.04□□□□□ -2.24
Q9N2K0 AP003716.2-201ENST00000528260 108 ntBASIC1.04□□□□□ -2.24
Q9N2K0 MIR3660-201ENST00000584845 100 ntBASIC1.04□□□□□ -2.24
Q9N2K0 AL442067.1-201ENST00000613261 223 ntBASIC1.04□□□□□ -2.24
Q9N2K0 AL365265.1-201ENST00000621045 234 ntBASIC1.04□□□□□ -2.24
Q9N2K0 Y_RNA.54-201ENST00000362766 105 ntBASIC1.03□□□□□ -2.24
Q9N2K0 Y_RNA.363-201ENST00000365529 113 ntBASIC1.03□□□□□ -2.24
Q9N2K0 Y_RNA.478-201ENST00000384358 107 ntBASIC1.03□□□□□ -2.24
Q9N2K0 RNU6-1228P-201ENST00000391014 107 ntBASIC1.03□□□□□ -2.24
Q9N2K0 RNU6-651P-201ENST00000411040 105 ntBASIC1.03□□□□□ -2.24
Q9N2K0 RNU6-847P-201ENST00000411115 108 ntBASIC1.03□□□□□ -2.24
Q9N2K0 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.03□□□□□ -2.24
Q9N2K0 AC009474.2-201ENST00000451383 136 ntBASIC1.03□□□□□ -2.24
Q9N2K0 AC107297.1-201ENST00000459991 176 ntBASIC1.03□□□□□ -2.24
Q9N2K0 Y_RNA.668-201ENST00000516233 93 ntBASIC1.03□□□□□ -2.24
Q9N2K0 RNU6-1299P-201ENST00000516316 100 ntBASIC1.03□□□□□ -2.24
Q9N2K0 MIR4251-201ENST00000635819 61 ntBASIC1.03□□□□□ -2.24
Q9N2K0 Y_RNA.226-201ENST00000364337 114 ntBASIC1.02□□□□□ -2.25
Q9N2K0 RNU4-17P-201ENST00000365598 141 ntBASIC1.02□□□□□ -2.25
Q9N2K0 Y_RNA.416-201ENST00000384014 113 ntBASIC1.02□□□□□ -2.25
Q9N2K0 Y_RNA.486-201ENST00000384398 107 ntBASIC1.02□□□□□ -2.25
Q9N2K0 Y_RNA.547-201ENST00000384654 119 ntBASIC1.02□□□□□ -2.25
Q9N2K0 SNORD28B-201ENST00000390993 75 ntBASIC1.02□□□□□ -2.25
Q9N2K0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.02□□□□□ -2.25
Q9N2K0 MTND3P2-201ENST00000438452 342 ntBASIC1.02□□□□□ -2.25
Q9N2K0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.02□□□□□ -2.25
Q9N2K0 snoU13.25-201ENST00000458945 104 ntBASIC1.02□□□□□ -2.25
Q9N2K0 RNU7-90P-201ENST00000459216 62 ntBASIC1.02□□□□□ -2.25
Q9N2K0 RNU7-21P-201ENST00000459430 62 ntBASIC1.02□□□□□ -2.25
Q9N2K0 Y_RNA.673-201ENST00000516306 88 ntBASIC1.02□□□□□ -2.25
Q9N2K0 RNA5SP153-201ENST00000516498 76 ntBASIC1.02□□□□□ -2.25
Q9N2K0 RNU7-25P-201ENST00000516544 62 ntBASIC1.02□□□□□ -2.25
Q9N2K0 RNU6-504P-201ENST00000516568 104 ntBASIC1.02□□□□□ -2.25
Q9N2K0 U4.1-201ENST00000620349 87 ntBASIC1.02□□□□□ -2.25
Q9N2K0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.02□□□□□ -2.25
Q9N2K0 SNORD115-28-201ENST00000363931 81 ntBASIC1.01□□□□□ -2.25
Q9N2K0 Y_RNA.277-201ENST00000364754 102 ntBASIC1.01□□□□□ -2.25
Q9N2K0 Y_RNA.432-201ENST00000384087 111 ntBASIC1.01□□□□□ -2.25
Q9N2K0 SNORA51.10-201ENST00000384418 136 ntBASIC1.01□□□□□ -2.25
Q9N2K0 MIR568-201ENST00000385036 95 ntBASIC1.01□□□□□ -2.25
Q9N2K0 MIR1285-1-201ENST00000408593 84 ntBASIC1.01□□□□□ -2.25
Q9N2K0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.01□□□□□ -2.25
Q9N2K0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.01□□□□□ -2.25
Q9N2K0 AC002429.1-201ENST00000437672 148 ntBASIC1.01□□□□□ -2.25
Q9N2K0 AL118496.2-201ENST00000448300 230 ntBASIC1.01□□□□□ -2.25
Q9N2K0 Y_RNA.666-201ENST00000516187 112 ntBASIC1.01□□□□□ -2.25
Q9N2K0 RNU7-181P-201ENST00000517234 74 ntBASIC1.01□□□□□ -2.25
Q9N2K0 AC109810.1-201ENST00000534066 224 ntBASIC1.01□□□□□ -2.25
Q9N2K0 AL353621.2-201ENST00000605340 133 ntBASIC1.01□□□□□ -2.25
Q9N2K0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.01□□□□□ -2.25
Q9N2K0 AC099654.10-201ENST00000640395 161 ntBASIC1.01□□□□□ -2.25
Q9N2K0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1□□□□□ -2.25
Q9N2K0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1□□□□□ -2.25
Q9N2K0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1□□□□□ -2.25
Q9N2K0 RNU6-653P-201ENST00000363074 106 ntBASIC1□□□□□ -2.25
Q9N2K0 RNY1P10-201ENST00000363268 113 ntBASIC1□□□□□ -2.25
Q9N2K0 RNU6-103P-201ENST00000363686 107 ntBASIC1□□□□□ -2.25
Q9N2K0 Y_RNA.350-201ENST00000365409 98 ntBASIC1□□□□□ -2.25
Q9N2K0 Y_RNA.572-201ENST00000384757 98 ntBASIC1□□□□□ -2.25
Q9N2K0 MIR200A-201ENST00000384875 90 ntBASIC1□□□□□ -2.25
Q9N2K0 MRPL35P3-201ENST00000421557 364 ntBASIC1□□□□□ -2.25
Q9N2K0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1□□□□□ -2.25
Q9N2K0 RPS26P48-201ENST00000491713 339 ntBASIC1□□□□□ -2.25
Q9N2K0 MIR4791-201ENST00000607666 84 ntBASIC1□□□□□ -2.25
Q9N2K0 AC062037.2-201ENST00000610137 73 ntBASIC1□□□□□ -2.25
Q9N2K0 SEPT14P17-201ENST00000617978 177 ntBASIC1□□□□□ -2.25
Q9N2K0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Q9N2K0 SNORD115-34-201ENST00000362441 82 ntBASIC0.99□□□□□ -2.25
Q9N2K0 Y_RNA.20-201ENST00000362479 113 ntBASIC0.99□□□□□ -2.25
Q9N2K0 SNORD115-12-201ENST00000362583 82 ntBASIC0.99□□□□□ -2.25
Q9N2K0 SNORD115-29-201ENST00000362834 82 ntBASIC0.99□□□□□ -2.25
Q9N2K0 SNORD115-9-201ENST00000362912 82 ntBASIC0.99□□□□□ -2.25
Q9N2K0 SNORD115-21-201ENST00000362963 81 ntBASIC0.99□□□□□ -2.25
Q9N2K0 RNU6-888P-201ENST00000363010 101 ntBASIC0.99□□□□□ -2.25
Q9N2K0 SNORD115-14-201ENST00000363090 81 ntBASIC0.99□□□□□ -2.25
Q9N2K0 SNORD115-13-201ENST00000363358 82 ntBASIC0.99□□□□□ -2.25
Q9N2K0 SNORD115-41-201ENST00000363608 82 ntBASIC0.99□□□□□ -2.25
Q9N2K0 SNORD115-11-201ENST00000363616 82 ntBASIC0.99□□□□□ -2.25
Q9N2K0 SNORD115-5-201ENST00000363633 82 ntBASIC0.99□□□□□ -2.25
Q9N2K0 SNORD115-39-201ENST00000363694 82 ntBASIC0.99□□□□□ -2.25
Q9N2K0 SNORD115-4-201ENST00000363810 82 ntBASIC0.99□□□□□ -2.25
Q9N2K0 SNORD115-16-201ENST00000363887 82 ntBASIC0.99□□□□□ -2.25
Q9N2K0 SNORD115-6-201ENST00000363942 82 ntBASIC0.99□□□□□ -2.25
Q9N2K0 SNORD115-42-201ENST00000364273 82 ntBASIC0.99□□□□□ -2.25
Q9N2K0 SNORD115-15-201ENST00000364809 81 ntBASIC0.99□□□□□ -2.25
Q9N2K0 Y_RNA.292-201ENST00000364904 97 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 203.7 ms