Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AC010205.1-201ENST00000616668 449 ntBASIC0.1□□□□□ -2.39
SHANK3Q9BYB0 RNU6-490P-201ENST00000362985 107 ntBASIC0.1□□□□□ -2.39
SHANK3Q9BYB0 RNU6-1209P-201ENST00000363655 107 ntBASIC0.1□□□□□ -2.39
SHANK3Q9BYB0 Y_RNA.516-201ENST00000384541 124 ntBASIC0.1□□□□□ -2.39
SHANK3Q9BYB0 MIR125B2-201ENST00000385128 89 ntBASIC0.1□□□□□ -2.39
SHANK3Q9BYB0 SNORA75.6-201ENST00000391318 127 ntBASIC0.1□□□□□ -2.39
SHANK3Q9BYB0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.1□□□□□ -2.39
SHANK3Q9BYB0 RNA5SP95-201ENST00000410319 137 ntBASIC0.1□□□□□ -2.39
SHANK3Q9BYB0 FCF1P9-201ENST00000412546 282 ntBASIC0.1□□□□□ -2.39
SHANK3Q9BYB0 MTCO2P27-201ENST00000420740 428 ntBASIC0.1□□□□□ -2.39
SHANK3Q9BYB0 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.1□□□□□ -2.39
SHANK3Q9BYB0 Y_RNA.635-201ENST00000459041 101 ntBASIC0.1□□□□□ -2.39
SHANK3Q9BYB0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.1□□□□□ -2.39
SHANK3Q9BYB0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.1□□□□□ -2.39
SHANK3Q9BYB0 AC127455.1-201ENST00000565496 145 ntBASIC0.1□□□□□ -2.39
SHANK3Q9BYB0 AC055872.1-201ENST00000570978 278 ntBASIC0.1□□□□□ -2.39
SHANK3Q9BYB0 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.1□□□□□ -2.39
SHANK3Q9BYB0 Y_RNA.772-201ENST00000606692 102 ntBASIC0.1□□□□□ -2.39
SHANK3Q9BYB0 AC011373.1-201ENST00000607270 237 ntBASIC0.1□□□□□ -2.39
SHANK3Q9BYB0 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.1□□□□□ -2.39
SHANK3Q9BYB0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.1□□□□□ -2.39
SHANK3Q9BYB0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.1□□□□□ -2.39
SHANK3Q9BYB0 Y_RNA.203-201ENST00000364106 102 ntBASIC0.09□□□□□ -2.4
SHANK3Q9BYB0 RNU6-1126P-201ENST00000384002 107 ntBASIC0.09□□□□□ -2.4
SHANK3Q9BYB0 MIR628-201ENST00000385229 95 ntBASIC0.09□□□□□ -2.4
SHANK3Q9BYB0 MIR802-201ENST00000390235 94 ntBASIC0.09□□□□□ -2.4
SHANK3Q9BYB0 SNORA40.8-201ENST00000411034 126 ntBASIC0.09□□□□□ -2.4
SHANK3Q9BYB0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.09□□□□□ -2.4
SHANK3Q9BYB0 RPL23AP91-201ENST00000569211 455 ntBASIC0.09□□□□□ -2.4
SHANK3Q9BYB0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.09□□□□□ -2.4
SHANK3Q9BYB0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.09□□□□□ -2.4
SHANK3Q9BYB0 MIR3612-201ENST00000579753 87 ntBASIC0.09□□□□□ -2.4
SHANK3Q9BYB0 MIR548AY-201ENST00000617669 107 ntBASIC0.09□□□□□ -2.4
SHANK3Q9BYB0 AL138825.1-201ENST00000618587 192 ntBASIC0.09□□□□□ -2.4
SHANK3Q9BYB0 AC022140.2-201ENST00000623500 188 ntBASIC0.09□□□□□ -2.4
SHANK3Q9BYB0 MIRLET7D-201ENST00000362263 87 ntBASIC0.08□□□□□ -2.4
SHANK3Q9BYB0 RNU6-926P-201ENST00000384075 107 ntBASIC0.08□□□□□ -2.4
SHANK3Q9BYB0 MIR601-201ENST00000385256 79 ntBASIC0.08□□□□□ -2.4
SHANK3Q9BYB0 SNORD100-201ENST00000408573 76 ntBASIC0.08□□□□□ -2.4
SHANK3Q9BYB0 MIR4771-2-201ENST00000577758 74 ntBASIC0.08□□□□□ -2.4
SHANK3Q9BYB0 MIR4771-1-201ENST00000582617 74 ntBASIC0.08□□□□□ -2.4
SHANK3Q9BYB0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.08□□□□□ -2.4
SHANK3Q9BYB0 Y_RNA.551-201ENST00000384661 102 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 SNORD116-4-201ENST00000384733 96 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 MIR214-201ENST00000385214 110 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 RNU6-1319P-201ENST00000390855 104 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 RNU6-747P-201ENST00000390928 104 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 RNU6-679P-201ENST00000391003 106 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 RNU6-241P-201ENST00000391148 104 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 MIR1295A-201ENST00000408463 79 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 RNU6-447P-201ENST00000410293 104 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 RNU6-1118P-201ENST00000410382 104 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 RNU6-1076P-201ENST00000410397 104 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 RNU6-355P-201ENST00000410427 104 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 SNORA36B-201ENST00000410438 131 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 RNU6-791P-201ENST00000410467 104 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 RNU6-705P-201ENST00000410601 104 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 RNU6-1100P-201ENST00000410691 104 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 RNU4-14P-201ENST00000410858 122 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 RNU6-860P-201ENST00000410860 104 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 RNU6-1217P-201ENST00000411276 104 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 SNORD71-201ENST00000411292 86 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 RNU6-785P-201ENST00000411324 104 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 RNU6-126P-201ENST00000516685 103 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 RNU6-448P-201ENST00000517052 107 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 AC141557.1-201ENST00000540982 400 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 SNORD92-201ENST00000585078 85 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 U6.90-201ENST00000614007 104 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 U6.70-201ENST00000620287 104 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 MIR938-201ENST00000401216 83 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 MIR548F1-201ENST00000408667 84 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 Y_RNA.646-201ENST00000410980 101 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 AC087499.4-201ENST00000448505 178 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 RNU7-67P-201ENST00000459003 62 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 SNORD11-201ENST00000459124 84 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 snoU13.2-201ENST00000459201 104 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 U8.20-201ENST00000459445 131 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 RNU6-958P-201ENST00000516995 106 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 AC098679.4-201ENST00000624241 654 ntBASIC0.07□□□□□ -2.4
SHANK3Q9BYB0 SNORD115-34-201ENST00000362441 82 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 SNORD115-12-201ENST00000362583 82 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 SNORD115-29-201ENST00000362834 82 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 SNORD115-9-201ENST00000362912 82 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 SNORD115-21-201ENST00000362963 81 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 SNORD114-16-201ENST00000363044 70 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 SNORD115-14-201ENST00000363090 81 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 SNORD115-13-201ENST00000363358 82 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 SNORD115-41-201ENST00000363608 82 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 SNORD115-11-201ENST00000363616 82 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 SNORD115-5-201ENST00000363633 82 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 SNORD115-39-201ENST00000363694 82 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 SNORD115-4-201ENST00000363810 82 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 SNORD115-16-201ENST00000363887 82 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 SNORD115-6-201ENST00000363942 82 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 SNORD115-42-201ENST00000364273 82 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 SNORD115-15-201ENST00000364809 81 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 SNORD115-1-201ENST00000364961 82 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 SNORD115-26-201ENST00000365067 82 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 SNORD115-10-201ENST00000365073 81 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 SNORD115-43-201ENST00000365503 82 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 354.8 ms