Protein–RNA interactions for Protein: Q96D46

NMD3, 60S ribosomal export protein NMD3, humanhuman

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3Q96D46 AC087499.4-201ENST00000448505 178 ntBASIC1.63□□□□□ -2.15
NMD3Q96D46 RPL39P39-201ENST00000455840 151 ntBASIC1.63□□□□□ -2.15
NMD3Q96D46 AC107297.1-201ENST00000459991 176 ntBASIC1.63□□□□□ -2.15
NMD3Q96D46 RPS29P11-201ENST00000496507 171 ntBASIC1.63□□□□□ -2.15
NMD3Q96D46 RNU4-57P-201ENST00000515980 135 ntBASIC1.63□□□□□ -2.15
NMD3Q96D46 Y_RNA.37-201ENST00000362606 108 ntBASIC1.62□□□□□ -2.15
NMD3Q96D46 SNORD114-1-201ENST00000362705 72 ntBASIC1.62□□□□□ -2.15
NMD3Q96D46 Y_RNA.370-201ENST00000365589 108 ntBASIC1.62□□□□□ -2.15
NMD3Q96D46 MIR9-3-201ENST00000385084 90 ntBASIC1.62□□□□□ -2.15
NMD3Q96D46 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.62□□□□□ -2.15
NMD3Q96D46 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.62□□□□□ -2.15
NMD3Q96D46 UBL5P3-201ENST00000475112 231 ntBASIC1.62□□□□□ -2.15
NMD3Q96D46 AC074198.2-201ENST00000508153 258 ntBASIC1.62□□□□□ -2.15
NMD3Q96D46 RNA5SP182-201ENST00000516064 82 ntBASIC1.62□□□□□ -2.15
NMD3Q96D46 SNORD111.1-201ENST00000516421 86 ntBASIC1.62□□□□□ -2.15
NMD3Q96D46 RNU7-43P-201ENST00000516554 64 ntBASIC1.62□□□□□ -2.15
NMD3Q96D46 RNU6-902P-201ENST00000517212 91 ntBASIC1.62□□□□□ -2.15
NMD3Q96D46 AC007751.1-201ENST00000529260 376 ntBASIC1.62□□□□□ -2.15
NMD3Q96D46 AL512310.8-201ENST00000550183 120 ntBASIC1.62□□□□□ -2.15
NMD3Q96D46 MIR3129-201ENST00000581095 76 ntBASIC1.62□□□□□ -2.15
NMD3Q96D46 AP001485.1-201ENST00000604799 199 ntBASIC1.62□□□□□ -2.15
NMD3Q96D46 RNU4-84P-201ENST00000364200 139 ntBASIC1.61□□□□□ -2.15
NMD3Q96D46 SNORA25.7-201ENST00000364375 127 ntBASIC1.61□□□□□ -2.15
NMD3Q96D46 Y_RNA.241-201ENST00000364470 117 ntBASIC1.61□□□□□ -2.15
NMD3Q96D46 RNU6-239P-201ENST00000390990 99 ntBASIC1.61□□□□□ -2.15
NMD3Q96D46 RPS27P16-201ENST00000425758 201 ntBASIC1.61□□□□□ -2.15
NMD3Q96D46 AF228730.3-201ENST00000436691 102 ntBASIC1.61□□□□□ -2.15
NMD3Q96D46 AC003989.2-201ENST00000440224 169 ntBASIC1.61□□□□□ -2.15
NMD3Q96D46 RNU6-250P-201ENST00000516958 103 ntBASIC1.61□□□□□ -2.15
NMD3Q96D46 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.61□□□□□ -2.15
NMD3Q96D46 MIR4764-201ENST00000580680 88 ntBASIC1.61□□□□□ -2.15
NMD3Q96D46 MIR548AR-201ENST00000582191 57 ntBASIC1.61□□□□□ -2.15
NMD3Q96D46 AC104984.5-201ENST00000586878 94 ntBASIC1.61□□□□□ -2.15
NMD3Q96D46 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.61□□□□□ -2.15
NMD3Q96D46 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
NMD3Q96D46 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.61□□□□□ -2.15
NMD3Q96D46 AL442644.1-201ENST00000454390 3105 ntBASIC1.61□□□□□ -2.15
NMD3Q96D46 RNU6-978P-201ENST00000364371 103 ntBASIC1.6□□□□□ -2.15
NMD3Q96D46 SNORA1-201ENST00000384107 130 ntBASIC1.6□□□□□ -2.15
NMD3Q96D46 RNU6-886P-201ENST00000384319 105 ntBASIC1.6□□□□□ -2.15
NMD3Q96D46 Y_RNA.542-201ENST00000384641 111 ntBASIC1.6□□□□□ -2.15
NMD3Q96D46 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.6□□□□□ -2.15
NMD3Q96D46 AC019129.1-201ENST00000403786 261 ntBASIC1.6□□□□□ -2.15
NMD3Q96D46 RNU5E-9P-201ENST00000411164 104 ntBASIC1.6□□□□□ -2.15
NMD3Q96D46 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.6□□□□□ -2.15
NMD3Q96D46 SNORA18.4-201ENST00000516440 124 ntBASIC1.6□□□□□ -2.15
NMD3Q96D46 AP003484.1-201ENST00000530974 250 ntBASIC1.6□□□□□ -2.15
NMD3Q96D46 MIR3664-201ENST00000579074 99 ntBASIC1.6□□□□□ -2.15
NMD3Q96D46 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
NMD3Q96D46 RNU6-1189P-201ENST00000383958 107 ntBASIC1.59□□□□□ -2.15
NMD3Q96D46 Y_RNA.410-201ENST00000383992 113 ntBASIC1.59□□□□□ -2.15
NMD3Q96D46 Y_RNA.555-201ENST00000384673 110 ntBASIC1.59□□□□□ -2.15
NMD3Q96D46 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
NMD3Q96D46 RN7SKP88-201ENST00000516847 250 ntBASIC1.59□□□□□ -2.15
NMD3Q96D46 7SK.8-201ENST00000612110 250 ntBASIC1.59□□□□□ -2.15
NMD3Q96D46 7SK.11-201ENST00000615477 250 ntBASIC1.59□□□□□ -2.15
NMD3Q96D46 7SK.13-201ENST00000622040 250 ntBASIC1.59□□□□□ -2.15
NMD3Q96D46 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.59□□□□□ -2.15
NMD3Q96D46 Y_RNA.272-201ENST00000364696 102 ntBASIC1.58□□□□□ -2.16
NMD3Q96D46 Y_RNA.393-201ENST00000383936 102 ntBASIC1.58□□□□□ -2.16
NMD3Q96D46 U8.13-201ENST00000390842 128 ntBASIC1.58□□□□□ -2.16
NMD3Q96D46 SNORD28B-201ENST00000390993 75 ntBASIC1.58□□□□□ -2.16
NMD3Q96D46 AL365205.2-201ENST00000594586 68 ntBASIC1.58□□□□□ -2.16
NMD3Q96D46 AC104465.1-201ENST00000611365 139 ntBASIC1.58□□□□□ -2.16
NMD3Q96D46 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.58□□□□□ -2.16
NMD3Q96D46 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.57□□□□□ -2.16
NMD3Q96D46 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.57□□□□□ -2.16
NMD3Q96D46 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
NMD3Q96D46 Y_RNA.441-201ENST00000384123 112 ntBASIC1.57□□□□□ -2.16
NMD3Q96D46 RNU6-768P-201ENST00000384683 107 ntBASIC1.57□□□□□ -2.16
NMD3Q96D46 SNORA40.5-201ENST00000391061 128 ntBASIC1.57□□□□□ -2.16
NMD3Q96D46 SNORD37.2-201ENST00000391075 66 ntBASIC1.57□□□□□ -2.16
NMD3Q96D46 RNU6-1135P-201ENST00000411083 103 ntBASIC1.57□□□□□ -2.16
NMD3Q96D46 SNORD36C-201ENST00000516733 66 ntBASIC1.57□□□□□ -2.16
NMD3Q96D46 MIR3945-201ENST00000581853 98 ntBASIC1.57□□□□□ -2.16
NMD3Q96D46 MIR6844-201ENST00000637122 62 ntBASIC1.57□□□□□ -2.16
NMD3Q96D46 AL161722.3-201ENST00000605789 2983 ntBASIC1.56□□□□□ -2.16
NMD3Q96D46 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.56□□□□□ -2.16
NMD3Q96D46 RNU6-597P-201ENST00000365620 102 ntBASIC1.56□□□□□ -2.16
NMD3Q96D46 MIR570-201ENST00000384917 97 ntBASIC1.56□□□□□ -2.16
NMD3Q96D46 SNORD77.3-201ENST00000391113 65 ntBASIC1.56□□□□□ -2.16
NMD3Q96D46 RNA5SP127-201ENST00000411051 133 ntBASIC1.56□□□□□ -2.16
NMD3Q96D46 RN7SL429P-201ENST00000479090 223 ntBASIC1.56□□□□□ -2.16
NMD3Q96D46 RN7SL489P-201ENST00000486185 223 ntBASIC1.56□□□□□ -2.16
NMD3Q96D46 RN7SL327P-201ENST00000488659 223 ntBASIC1.56□□□□□ -2.16
NMD3Q96D46 AC090821.2-201ENST00000523552 176 ntBASIC1.56□□□□□ -2.16
NMD3Q96D46 CYP3A52P-201ENST00000563326 91 ntBASIC1.56□□□□□ -2.16
NMD3Q96D46 MIR4255-201ENST00000579351 72 ntBASIC1.56□□□□□ -2.16
NMD3Q96D46 RN7SL853P-201ENST00000617250 223 ntBASIC1.56□□□□□ -2.16
NMD3Q96D46 AC008133.2-201ENST00000624540 351 ntBASIC1.56□□□□□ -2.16
NMD3Q96D46 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
NMD3Q96D46 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
NMD3Q96D46 Y_RNA.8-201ENST00000362353 102 ntBASIC1.55□□□□□ -2.16
NMD3Q96D46 SNORD115-34-201ENST00000362441 82 ntBASIC1.55□□□□□ -2.16
NMD3Q96D46 SNORD115-12-201ENST00000362583 82 ntBASIC1.55□□□□□ -2.16
NMD3Q96D46 SNORD115-29-201ENST00000362834 82 ntBASIC1.55□□□□□ -2.16
NMD3Q96D46 SNORD115-9-201ENST00000362912 82 ntBASIC1.55□□□□□ -2.16
NMD3Q96D46 SNORD115-21-201ENST00000362963 81 ntBASIC1.55□□□□□ -2.16
NMD3Q96D46 SNORD115-14-201ENST00000363090 81 ntBASIC1.55□□□□□ -2.16
NMD3Q96D46 SNORD115-13-201ENST00000363358 82 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 241.5 ms