Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 SNORD24-201ENST00000383884 75 ntBASIC1.57□□□□□ -2.16
CLIP4Q8N3C7 SNORA1-201ENST00000384107 130 ntBASIC1.57□□□□□ -2.16
CLIP4Q8N3C7 Y_RNA.568-201ENST00000384742 113 ntBASIC1.57□□□□□ -2.16
CLIP4Q8N3C7 MIR583-201ENST00000384846 75 ntBASIC1.57□□□□□ -2.16
CLIP4Q8N3C7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CLIP4Q8N3C7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.57□□□□□ -2.16
CLIP4Q8N3C7 AC093850.1-201ENST00000454121 251 ntBASIC1.57□□□□□ -2.16
CLIP4Q8N3C7 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.57□□□□□ -2.16
CLIP4Q8N3C7 AC099513.1-201ENST00000490423 301 ntBASIC1.57□□□□□ -2.16
CLIP4Q8N3C7 RNU6-789P-201ENST00000517105 102 ntBASIC1.57□□□□□ -2.16
CLIP4Q8N3C7 AC090142.3-201ENST00000519012 385 ntBASIC1.57□□□□□ -2.16
CLIP4Q8N3C7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CLIP4Q8N3C7 MIR3129-201ENST00000581095 76 ntBASIC1.57□□□□□ -2.16
CLIP4Q8N3C7 AP001485.1-201ENST00000604799 199 ntBASIC1.57□□□□□ -2.16
CLIP4Q8N3C7 MIR7843-201ENST00000622274 79 ntBASIC1.57□□□□□ -2.16
CLIP4Q8N3C7 AC084768.2-201ENST00000622736 221 ntBASIC1.57□□□□□ -2.16
CLIP4Q8N3C7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CLIP4Q8N3C7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CLIP4Q8N3C7 RNU6-661P-201ENST00000362409 107 ntBASIC1.56□□□□□ -2.16
CLIP4Q8N3C7 RNY1P11-201ENST00000363759 113 ntBASIC1.56□□□□□ -2.16
CLIP4Q8N3C7 SNORA20-201ENST00000384662 132 ntBASIC1.56□□□□□ -2.16
CLIP4Q8N3C7 MIR548A2-201ENST00000384956 97 ntBASIC1.56□□□□□ -2.16
CLIP4Q8N3C7 U8.13-201ENST00000390842 128 ntBASIC1.56□□□□□ -2.16
CLIP4Q8N3C7 MIR1289-2-201ENST00000408360 111 ntBASIC1.56□□□□□ -2.16
CLIP4Q8N3C7 MIR548O-201ENST00000408583 114 ntBASIC1.56□□□□□ -2.16
CLIP4Q8N3C7 PGBD4P5-201ENST00000445958 426 ntBASIC1.56□□□□□ -2.16
CLIP4Q8N3C7 AC092991.1-201ENST00000477176 376 ntBASIC1.56□□□□□ -2.16
CLIP4Q8N3C7 SNORA18.4-201ENST00000516440 124 ntBASIC1.56□□□□□ -2.16
CLIP4Q8N3C7 MIR8081-201ENST00000611533 95 ntBASIC1.56□□□□□ -2.16
CLIP4Q8N3C7 SNORD3E-202ENST00000627253 216 ntBASIC1.56□□□□□ -2.16
CLIP4Q8N3C7 SNORD38C-201ENST00000384381 69 ntBASIC1.55□□□□□ -2.16
CLIP4Q8N3C7 Y_RNA.547-201ENST00000384654 119 ntBASIC1.55□□□□□ -2.16
CLIP4Q8N3C7 MIR518F-201ENST00000384973 87 ntBASIC1.55□□□□□ -2.16
CLIP4Q8N3C7 AC015922.2-201ENST00000435593 184 ntBASIC1.55□□□□□ -2.16
CLIP4Q8N3C7 TMSB4XP3-201ENST00000445144 114 ntBASIC1.55□□□□□ -2.16
CLIP4Q8N3C7 RNU7-197P-201ENST00000458836 62 ntBASIC1.55□□□□□ -2.16
CLIP4Q8N3C7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.55□□□□□ -2.16
CLIP4Q8N3C7 RNU7-25P-201ENST00000516544 62 ntBASIC1.55□□□□□ -2.16
CLIP4Q8N3C7 MIR4778-201ENST00000577635 80 ntBASIC1.55□□□□□ -2.16
CLIP4Q8N3C7 AL365205.2-201ENST00000594586 68 ntBASIC1.55□□□□□ -2.16
CLIP4Q8N3C7 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.55□□□□□ -2.16
CLIP4Q8N3C7 AL513423.1-201ENST00000621695 132 ntBASIC1.55□□□□□ -2.16
CLIP4Q8N3C7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.54□□□□□ -2.16
CLIP4Q8N3C7 Y_RNA.251-201ENST00000364551 99 ntBASIC1.54□□□□□ -2.16
CLIP4Q8N3C7 RNU6-203P-201ENST00000384038 104 ntBASIC1.54□□□□□ -2.16
CLIP4Q8N3C7 Y_RNA.542-201ENST00000384641 111 ntBASIC1.54□□□□□ -2.16
CLIP4Q8N3C7 MIR660-201ENST00000385235 97 ntBASIC1.54□□□□□ -2.16
CLIP4Q8N3C7 RNU6-460P-201ENST00000391158 108 ntBASIC1.54□□□□□ -2.16
CLIP4Q8N3C7 AF228730.3-201ENST00000436691 102 ntBASIC1.54□□□□□ -2.16
CLIP4Q8N3C7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.54□□□□□ -2.16
CLIP4Q8N3C7 RNU6-406P-201ENST00000516470 107 ntBASIC1.54□□□□□ -2.16
CLIP4Q8N3C7 AC015726.2-201ENST00000620112 122 ntBASIC1.54□□□□□ -2.16
CLIP4Q8N3C7 AC091895.1-201ENST00000624494 256 ntBASIC1.54□□□□□ -2.16
CLIP4Q8N3C7 AC010332.2-201ENST00000613083 1904 ntBASIC1.54□□□□□ -2.16
CLIP4Q8N3C7 WWP1P1-201ENST00000466609 2769 ntBASIC1.53□□□□□ -2.16
CLIP4Q8N3C7 MIR424-201ENST00000362227 98 ntBASIC1.53□□□□□ -2.16
CLIP4Q8N3C7 SNORD115-28-201ENST00000363931 81 ntBASIC1.53□□□□□ -2.16
CLIP4Q8N3C7 Y_RNA.420-201ENST00000384043 110 ntBASIC1.53□□□□□ -2.16
CLIP4Q8N3C7 MIR624-201ENST00000385217 97 ntBASIC1.53□□□□□ -2.16
CLIP4Q8N3C7 Y_RNA.584-201ENST00000391090 114 ntBASIC1.53□□□□□ -2.16
CLIP4Q8N3C7 RNU6-257P-201ENST00000410238 98 ntBASIC1.53□□□□□ -2.16
CLIP4Q8N3C7 RNA5SP127-201ENST00000411051 133 ntBASIC1.53□□□□□ -2.16
CLIP4Q8N3C7 HMGN2P23-201ENST00000456759 269 ntBASIC1.53□□□□□ -2.16
CLIP4Q8N3C7 RNU6-250P-201ENST00000516958 103 ntBASIC1.53□□□□□ -2.16
CLIP4Q8N3C7 MIR6845-201ENST00000613182 61 ntBASIC1.53□□□□□ -2.16
CLIP4Q8N3C7 AC134878.1-201ENST00000619901 243 ntBASIC1.53□□□□□ -2.16
CLIP4Q8N3C7 AC132825.6-201ENST00000638861 357 ntBASIC1.53□□□□□ -2.16
CLIP4Q8N3C7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.52□□□□□ -2.17
CLIP4Q8N3C7 RNU6-414P-201ENST00000363705 104 ntBASIC1.52□□□□□ -2.17
CLIP4Q8N3C7 RNU6-1292P-201ENST00000383856 107 ntBASIC1.52□□□□□ -2.17
CLIP4Q8N3C7 MIR516B2-201ENST00000385190 85 ntBASIC1.52□□□□□ -2.17
CLIP4Q8N3C7 SNORD77.3-201ENST00000391113 65 ntBASIC1.52□□□□□ -2.17
CLIP4Q8N3C7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.52□□□□□ -2.17
CLIP4Q8N3C7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.52□□□□□ -2.17
CLIP4Q8N3C7 AC131055.1-201ENST00000584626 316 ntBASIC1.52□□□□□ -2.17
CLIP4Q8N3C7 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.52□□□□□ -2.17
CLIP4Q8N3C7 AC095038.3-201ENST00000634439 195 ntBASIC1.52□□□□□ -2.17
CLIP4Q8N3C7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.51□□□□□ -2.17
CLIP4Q8N3C7 AL157777.2-201ENST00000258070 137 ntBASIC1.51□□□□□ -2.17
CLIP4Q8N3C7 Y_RNA.37-201ENST00000362606 108 ntBASIC1.51□□□□□ -2.17
CLIP4Q8N3C7 MIR452-201ENST00000385020 85 ntBASIC1.51□□□□□ -2.17
CLIP4Q8N3C7 SNORA40-201ENST00000388090 126 ntBASIC1.51□□□□□ -2.17
CLIP4Q8N3C7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CLIP4Q8N3C7 Y_RNA.586-201ENST00000391146 98 ntBASIC1.51□□□□□ -2.17
CLIP4Q8N3C7 AC004965.1-201ENST00000413033 213 ntBASIC1.51□□□□□ -2.17
CLIP4Q8N3C7 MTND4LP9-201ENST00000427694 174 ntBASIC1.51□□□□□ -2.17
CLIP4Q8N3C7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.51□□□□□ -2.17
CLIP4Q8N3C7 SUMO2P16-201ENST00000519475 264 ntBASIC1.51□□□□□ -2.17
CLIP4Q8N3C7 MIR4524B-201ENST00000581569 115 ntBASIC1.51□□□□□ -2.17
CLIP4Q8N3C7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.51□□□□□ -2.17
CLIP4Q8N3C7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
CLIP4Q8N3C7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CLIP4Q8N3C7 RNU6-1123P-201ENST00000362347 106 ntBASIC1.5□□□□□ -2.17
CLIP4Q8N3C7 RNU6-457P-201ENST00000363999 107 ntBASIC1.5□□□□□ -2.17
CLIP4Q8N3C7 MIR194-1-201ENST00000384892 85 ntBASIC1.5□□□□□ -2.17
CLIP4Q8N3C7 MIR136-201ENST00000385207 82 ntBASIC1.5□□□□□ -2.17
CLIP4Q8N3C7 AL161935.2-201ENST00000414627 60 ntBASIC1.5□□□□□ -2.17
CLIP4Q8N3C7 JTBP1-201ENST00000441314 247 ntBASIC1.5□□□□□ -2.17
CLIP4Q8N3C7 AC005908.1-201ENST00000468701 347 ntBASIC1.5□□□□□ -2.17
CLIP4Q8N3C7 RNU6-830P-201ENST00000516353 107 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 285.8 ms