Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 AC027335.2-201ENST00000624030 375 ntBASIC1.17□□□□□ -2.22
LRIF1Q5T3J3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.17□□□□□ -2.22
LRIF1Q5T3J3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.17□□□□□ -2.22
LRIF1Q5T3J3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
LRIF1Q5T3J3 Y_RNA.269-201ENST00000364685 89 ntBASIC1.16□□□□□ -2.22
LRIF1Q5T3J3 SNORA20.1-201ENST00000364790 130 ntBASIC1.16□□□□□ -2.22
LRIF1Q5T3J3 RNU6-484P-201ENST00000384016 107 ntBASIC1.16□□□□□ -2.22
LRIF1Q5T3J3 Y_RNA.477-201ENST00000384352 108 ntBASIC1.16□□□□□ -2.22
LRIF1Q5T3J3 SNORD28B-201ENST00000390993 75 ntBASIC1.16□□□□□ -2.22
LRIF1Q5T3J3 SNRPGP8-201ENST00000454064 226 ntBASIC1.16□□□□□ -2.22
LRIF1Q5T3J3 snoU13.25-201ENST00000458945 104 ntBASIC1.16□□□□□ -2.22
LRIF1Q5T3J3 SNORD79.1-201ENST00000516069 84 ntBASIC1.16□□□□□ -2.22
LRIF1Q5T3J3 RN7SKP179-201ENST00000516126 217 ntBASIC1.16□□□□□ -2.22
LRIF1Q5T3J3 AC097639.2-201ENST00000603159 172 ntBASIC1.16□□□□□ -2.22
LRIF1Q5T3J3 AL512598.1-201ENST00000610158 273 ntBASIC1.16□□□□□ -2.22
LRIF1Q5T3J3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
LRIF1Q5T3J3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.22
LRIF1Q5T3J3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.15□□□□□ -2.23
LRIF1Q5T3J3 Y_RNA.65-201ENST00000362846 100 ntBASIC1.15□□□□□ -2.23
LRIF1Q5T3J3 RNU6-888P-201ENST00000363010 101 ntBASIC1.15□□□□□ -2.23
LRIF1Q5T3J3 RNA5SP264-201ENST00000363115 107 ntBASIC1.15□□□□□ -2.23
LRIF1Q5T3J3 RNY1-201ENST00000364228 113 ntBASIC1.15□□□□□ -2.23
LRIF1Q5T3J3 MT-TT-201ENST00000387460 66 ntBASIC1.15□□□□□ -2.23
LRIF1Q5T3J3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.15□□□□□ -2.23
LRIF1Q5T3J3 RNU2-70P-201ENST00000410718 179 ntBASIC1.15□□□□□ -2.23
LRIF1Q5T3J3 RNU6-847P-201ENST00000411115 108 ntBASIC1.15□□□□□ -2.23
LRIF1Q5T3J3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.15□□□□□ -2.23
LRIF1Q5T3J3 AL591806.2-201ENST00000433122 173 ntBASIC1.15□□□□□ -2.23
LRIF1Q5T3J3 AC107297.1-201ENST00000459991 176 ntBASIC1.15□□□□□ -2.23
LRIF1Q5T3J3 RNU6-453P-201ENST00000516819 85 ntBASIC1.15□□□□□ -2.23
LRIF1Q5T3J3 RNU11-2P-201ENST00000516898 142 ntBASIC1.15□□□□□ -2.23
LRIF1Q5T3J3 RNU7-181P-201ENST00000517234 74 ntBASIC1.15□□□□□ -2.23
LRIF1Q5T3J3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.15□□□□□ -2.23
LRIF1Q5T3J3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.14□□□□□ -2.23
LRIF1Q5T3J3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
LRIF1Q5T3J3 RNU1-17P-201ENST00000363022 152 ntBASIC1.14□□□□□ -2.23
LRIF1Q5T3J3 SNORD115-28-201ENST00000363931 81 ntBASIC1.14□□□□□ -2.23
LRIF1Q5T3J3 Y_RNA.634-201ENST00000364811 113 ntBASIC1.14□□□□□ -2.23
LRIF1Q5T3J3 Y_RNA.307-201ENST00000365022 117 ntBASIC1.14□□□□□ -2.23
LRIF1Q5T3J3 SNORA70.7-201ENST00000384159 133 ntBASIC1.14□□□□□ -2.23
LRIF1Q5T3J3 RNU6-574P-201ENST00000384265 107 ntBASIC1.14□□□□□ -2.23
LRIF1Q5T3J3 MIR222-201ENST00000384992 110 ntBASIC1.14□□□□□ -2.23
LRIF1Q5T3J3 AL591704.2-201ENST00000421658 181 ntBASIC1.14□□□□□ -2.23
LRIF1Q5T3J3 RNU2-13P-201ENST00000515909 113 ntBASIC1.14□□□□□ -2.23
LRIF1Q5T3J3 RNU6-693P-201ENST00000516134 107 ntBASIC1.14□□□□□ -2.23
LRIF1Q5T3J3 AC007751.1-201ENST00000529260 376 ntBASIC1.14□□□□□ -2.23
LRIF1Q5T3J3 MIR4251-201ENST00000635819 61 ntBASIC1.14□□□□□ -2.23
LRIF1Q5T3J3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.14□□□□□ -2.23
LRIF1Q5T3J3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
LRIF1Q5T3J3 SNORD115-34-201ENST00000362441 82 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 SNORD115-12-201ENST00000362583 82 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 Y_RNA.60-201ENST00000362831 98 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 SNORD115-29-201ENST00000362834 82 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 Y_RNA.66-201ENST00000362862 102 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 SNORD115-9-201ENST00000362912 82 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 SNORD115-21-201ENST00000362963 81 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 SNORD115-14-201ENST00000363090 81 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 Y_RNA.121-201ENST00000363309 113 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 SNORD115-13-201ENST00000363358 82 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 SNORD115-41-201ENST00000363608 82 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 SNORD115-11-201ENST00000363616 82 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 SNORD115-5-201ENST00000363633 82 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 SNORD115-39-201ENST00000363694 82 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 SNORD115-4-201ENST00000363810 82 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 RNU1-124P-201ENST00000363861 145 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 SNORD115-16-201ENST00000363887 82 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 SNORD115-6-201ENST00000363942 82 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 Y_RNA.199-201ENST00000364014 102 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 SNORD115-42-201ENST00000364273 82 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 SNORD115-15-201ENST00000364809 81 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 SNORD115-1-201ENST00000364961 82 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 SNORD115-26-201ENST00000365067 82 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 SNORD115-10-201ENST00000365073 81 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 RNU6-728P-201ENST00000365375 104 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 SNORD115-43-201ENST00000365503 82 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 SNORD115-36-201ENST00000365629 82 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 SNORD61-201ENST00000384252 73 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 MIR19B1-201ENST00000384829 87 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 snosnR66.1-201ENST00000391095 99 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 RNU4-43P-201ENST00000410628 137 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 Y_RNA.626-201ENST00000411288 95 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 Y_RNA.680-201ENST00000516441 93 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 RNA5SP404-201ENST00000517118 132 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 AC109810.1-201ENST00000534066 224 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 MIR4744-201ENST00000581563 82 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 SNORD115-40-201ENST00000606510 82 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 AC134878.1-201ENST00000619901 243 ntBASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.13□□□□□ -2.23
LRIF1Q5T3J3 MIR103A2-201ENST00000362154 78 ntBASIC1.12□□□□□ -2.23
LRIF1Q5T3J3 SNORD45.3-201ENST00000363836 72 ntBASIC1.12□□□□□ -2.23
LRIF1Q5T3J3 SNORA51.10-201ENST00000384418 136 ntBASIC1.12□□□□□ -2.23
LRIF1Q5T3J3 RNU6-939P-201ENST00000384634 107 ntBASIC1.12□□□□□ -2.23
LRIF1Q5T3J3 MIR518F-201ENST00000384973 87 ntBASIC1.12□□□□□ -2.23
LRIF1Q5T3J3 SNORA79-201ENST00000408376 140 ntBASIC1.12□□□□□ -2.23
LRIF1Q5T3J3 Y_RNA.618-201ENST00000410949 107 ntBASIC1.12□□□□□ -2.23
LRIF1Q5T3J3 Y_RNA.622-201ENST00000411091 108 ntBASIC1.12□□□□□ -2.23
LRIF1Q5T3J3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.12□□□□□ -2.23
LRIF1Q5T3J3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.12□□□□□ -2.23
LRIF1Q5T3J3 AC009474.2-201ENST00000451383 136 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms