Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 MIR6079-201ENST00000635807 62 ntBASIC3.45□□□□□ -1.86
NFX1Q12986 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
NFX1Q12986 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.44□□□□□ -1.86
NFX1Q12986 SNORD56.3-201ENST00000363507 71 ntBASIC3.44□□□□□ -1.86
NFX1Q12986 SNORA25.4-201ENST00000363666 124 ntBASIC3.44□□□□□ -1.86
NFX1Q12986 SNORA71.1-201ENST00000364523 117 ntBASIC3.44□□□□□ -1.86
NFX1Q12986 Y_RNA.336-201ENST00000365307 109 ntBASIC3.44□□□□□ -1.86
NFX1Q12986 SNORD15B-201ENST00000384714 146 ntBASIC3.44□□□□□ -1.86
NFX1Q12986 AC074348.1-201ENST00000426503 132 ntBASIC3.44□□□□□ -1.86
NFX1Q12986 AC022018.1-201ENST00000430685 241 ntBASIC3.44□□□□□ -1.86
NFX1Q12986 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.44□□□□□ -1.86
NFX1Q12986 CYP2C59P-201ENST00000457790 269 ntBASIC3.44□□□□□ -1.86
NFX1Q12986 RNU7-34P-201ENST00000459394 64 ntBASIC3.44□□□□□ -1.86
NFX1Q12986 AL049830.1-201ENST00000468034 425 ntBASIC3.44□□□□□ -1.86
NFX1Q12986 SCARNA20.6-201ENST00000517251 106 ntBASIC3.44□□□□□ -1.86
NFX1Q12986 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.44□□□□□ -1.86
NFX1Q12986 MIR6841-201ENST00000637129 72 ntBASIC3.44□□□□□ -1.86
NFX1Q12986 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.44□□□□□ -1.86
NFX1Q12986 AC009487.2-201ENST00000420969 6821 ntBASIC3.44□□□□□ -1.86
NFX1Q12986 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.43□□□□□ -1.86
NFX1Q12986 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
NFX1Q12986 RNA5SP383-201ENST00000362934 120 ntBASIC3.43□□□□□ -1.86
NFX1Q12986 SNORD68-201ENST00000363214 84 ntBASIC3.43□□□□□ -1.86
NFX1Q12986 RNU6-461P-201ENST00000364195 107 ntBASIC3.43□□□□□ -1.86
NFX1Q12986 RNU6-805P-201ENST00000365643 106 ntBASIC3.43□□□□□ -1.86
NFX1Q12986 AL161788.1-201ENST00000441805 169 ntBASIC3.43□□□□□ -1.86
NFX1Q12986 RNU6-303P-201ENST00000517091 106 ntBASIC3.43□□□□□ -1.86
NFX1Q12986 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.43□□□□□ -1.86
NFX1Q12986 MIR4762-201ENST00000585261 75 ntBASIC3.43□□□□□ -1.86
NFX1Q12986 AC012676.2-201ENST00000619258 186 ntBASIC3.43□□□□□ -1.86
NFX1Q12986 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
NFX1Q12986 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NFX1Q12986 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NFX1Q12986 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
NFX1Q12986 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NFX1Q12986 RNU6-669P-201ENST00000365575 107 ntBASIC3.42□□□□□ -1.86
NFX1Q12986 MIR520H-201ENST00000385126 88 ntBASIC3.42□□□□□ -1.86
NFX1Q12986 AL109933.2-201ENST00000452651 260 ntBASIC3.42□□□□□ -1.86
NFX1Q12986 RNU1-143P-201ENST00000516296 146 ntBASIC3.42□□□□□ -1.86
NFX1Q12986 SNORD45.4-201ENST00000516629 73 ntBASIC3.42□□□□□ -1.86
NFX1Q12986 RNU6-826P-201ENST00000516827 104 ntBASIC3.42□□□□□ -1.86
NFX1Q12986 MIR3616-201ENST00000584070 92 ntBASIC3.42□□□□□ -1.86
NFX1Q12986 FAM106DP-201ENST00000586416 501 ntBASIC3.42□□□□□ -1.86
NFX1Q12986 U1.23-201ENST00000610293 146 ntBASIC3.42□□□□□ -1.86
NFX1Q12986 MIR7106-201ENST00000612419 65 ntBASIC3.42□□□□□ -1.86
NFX1Q12986 U2.20-201ENST00000613956 192 ntBASIC3.42□□□□□ -1.86
NFX1Q12986 RNU1-68P-201ENST00000615382 146 ntBASIC3.42□□□□□ -1.86
NFX1Q12986 U1.39-201ENST00000621562 146 ntBASIC3.42□□□□□ -1.86
NFX1Q12986 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NFX1Q12986 ICE2P2-201ENST00000483823 2787 ntBASIC3.42□□□□□ -1.86
NFX1Q12986 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NFX1Q12986 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
NFX1Q12986 SNORD115-34-201ENST00000362441 82 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 SNORD115-12-201ENST00000362583 82 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 SNORD115-29-201ENST00000362834 82 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 SNORD115-9-201ENST00000362912 82 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 SNORD115-21-201ENST00000362963 81 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 RNA5SP133-201ENST00000363368 119 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 SNORD115-41-201ENST00000363608 82 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 SNORD115-11-201ENST00000363616 82 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 SNORD115-5-201ENST00000363633 82 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 SNORD115-4-201ENST00000363810 82 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 SNORD115-6-201ENST00000363942 82 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 SNORD115-42-201ENST00000364273 82 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 Y_RNA.264-201ENST00000364665 102 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 SNORD115-15-201ENST00000364809 81 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 SNORD115-26-201ENST00000365067 82 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 SNORD115-10-201ENST00000365073 81 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 SNORD115-43-201ENST00000365503 82 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 SNORD115-36-201ENST00000365629 82 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 RNU6-220P-201ENST00000390919 107 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 SNORD77.2-201ENST00000391045 68 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 RNA5SP293-201ENST00000410527 113 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 RNU2-63P-201ENST00000410792 194 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 HMGN2P34-201ENST00000437647 269 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 AC234781.5-201ENST00000508429 271 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 RNU7-128P-201ENST00000517247 62 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 AC090821.2-201ENST00000523552 176 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 AC103810.6-201ENST00000606708 136 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 MIR622-201ENST00000638396 96 ntBASIC3.41□□□□□ -1.86
NFX1Q12986 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
NFX1Q12986 AC096644.4-201ENST00000563417 2912 ntBASIC3.4□□□□□ -1.86
NFX1Q12986 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
NFX1Q12986 Y_RNA.236-201ENST00000364427 111 ntBASIC3.4□□□□□ -1.87
NFX1Q12986 U8.5-201ENST00000364528 136 ntBASIC3.4□□□□□ -1.87
NFX1Q12986 RNU6-865P-201ENST00000364772 107 ntBASIC3.4□□□□□ -1.87
NFX1Q12986 Y_RNA.494-201ENST00000384432 111 ntBASIC3.4□□□□□ -1.87
NFX1Q12986 SNORD38.2-201ENST00000384470 69 ntBASIC3.4□□□□□ -1.87
NFX1Q12986 Y_RNA.510-201ENST00000384511 114 ntBASIC3.4□□□□□ -1.87
NFX1Q12986 SNORA2B-201ENST00000384583 137 ntBASIC3.4□□□□□ -1.87
NFX1Q12986 SNORA80E-201ENST00000384744 137 ntBASIC3.4□□□□□ -1.87
NFX1Q12986 SNORD67-201ENST00000390833 111 ntBASIC3.4□□□□□ -1.87
NFX1Q12986 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
NFX1Q12986 AC110620.1-201ENST00000416042 228 ntBASIC3.4□□□□□ -1.87
NFX1Q12986 RPL23AP94-201ENST00000512518 302 ntBASIC3.4□□□□□ -1.87
NFX1Q12986 AP002004.2-201ENST00000531656 154 ntBASIC3.4□□□□□ -1.87
NFX1Q12986 AL356280.1-201ENST00000603614 379 ntBASIC3.4□□□□□ -1.87
NFX1Q12986 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.4□□□□□ -1.87
NFX1Q12986 AC103706.3-201ENST00000636297 85 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 218 ms