Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 snoU13.21-201ENST00000459368 105 ntBASIC0.5□□□□□ -2.33
HMGCS1Q01581 Y_RNA.673-201ENST00000516306 88 ntBASIC0.5□□□□□ -2.33
HMGCS1Q01581 MIR2115-201ENST00000516657 100 ntBASIC0.5□□□□□ -2.33
HMGCS1Q01581 RNU7-149P-201ENST00000516739 59 ntBASIC0.5□□□□□ -2.33
HMGCS1Q01581 AC025627.3-201ENST00000582078 182 ntBASIC0.5□□□□□ -2.33
HMGCS1Q01581 AL512605.2-201ENST00000592972 256 ntBASIC0.5□□□□□ -2.33
HMGCS1Q01581 AC013791.1-201ENST00000616619 62 ntBASIC0.5□□□□□ -2.33
HMGCS1Q01581 AC243994.1-201ENST00000618627 109 ntBASIC0.5□□□□□ -2.33
HMGCS1Q01581 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
HMGCS1Q01581 RNA5SP347-201ENST00000362445 119 ntBASIC0.49□□□□□ -2.33
HMGCS1Q01581 Y_RNA.26-201ENST00000362539 101 ntBASIC0.49□□□□□ -2.33
HMGCS1Q01581 snoU2_19.2-201ENST00000363024 80 ntBASIC0.49□□□□□ -2.33
HMGCS1Q01581 RNU6-806P-201ENST00000365147 105 ntBASIC0.49□□□□□ -2.33
HMGCS1Q01581 SNORA1.2-201ENST00000365189 134 ntBASIC0.49□□□□□ -2.33
HMGCS1Q01581 Y_RNA.541-201ENST00000384640 113 ntBASIC0.49□□□□□ -2.33
HMGCS1Q01581 MIR1827-201ENST00000408549 66 ntBASIC0.49□□□□□ -2.33
HMGCS1Q01581 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.49□□□□□ -2.33
HMGCS1Q01581 RNU6-847P-201ENST00000411115 108 ntBASIC0.49□□□□□ -2.33
HMGCS1Q01581 AC244098.3-201ENST00000424803 96 ntBASIC0.49□□□□□ -2.33
HMGCS1Q01581 Y_RNA.666-201ENST00000516187 112 ntBASIC0.49□□□□□ -2.33
HMGCS1Q01581 RNU6-1007P-201ENST00000516586 107 ntBASIC0.49□□□□□ -2.33
HMGCS1Q01581 AL021707.8-201ENST00000609428 183 ntBASIC0.49□□□□□ -2.33
HMGCS1Q01581 RNU6-369P-201ENST00000362515 102 ntBASIC0.48□□□□□ -2.33
HMGCS1Q01581 Y_RNA.168-201ENST00000363740 102 ntBASIC0.48□□□□□ -2.33
HMGCS1Q01581 Y_RNA.214-201ENST00000364201 112 ntBASIC0.48□□□□□ -2.33
HMGCS1Q01581 RNU6-662P-201ENST00000384253 104 ntBASIC0.48□□□□□ -2.33
HMGCS1Q01581 Y_RNA.508-201ENST00000384502 114 ntBASIC0.48□□□□□ -2.33
HMGCS1Q01581 RNU6-125P-201ENST00000384505 107 ntBASIC0.48□□□□□ -2.33
HMGCS1Q01581 RNU6-205P-201ENST00000390858 107 ntBASIC0.48□□□□□ -2.33
HMGCS1Q01581 MIR548O-201ENST00000408583 114 ntBASIC0.48□□□□□ -2.33
HMGCS1Q01581 RPL21P38-201ENST00000418090 167 ntBASIC0.48□□□□□ -2.33
HMGCS1Q01581 AC090844.1-201ENST00000422019 156 ntBASIC0.48□□□□□ -2.33
HMGCS1Q01581 MTND4LP11-201ENST00000422184 280 ntBASIC0.48□□□□□ -2.33
HMGCS1Q01581 AC092628.1-201ENST00000436250 252 ntBASIC0.48□□□□□ -2.33
HMGCS1Q01581 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.48□□□□□ -2.33
HMGCS1Q01581 RNU4-54P-201ENST00000516428 129 ntBASIC0.48□□□□□ -2.33
HMGCS1Q01581 RNA5SP121-201ENST00000516537 101 ntBASIC0.48□□□□□ -2.33
HMGCS1Q01581 MIR5692C2-201ENST00000577959 77 ntBASIC0.48□□□□□ -2.33
HMGCS1Q01581 AC011195.1-201ENST00000578177 177 ntBASIC0.48□□□□□ -2.33
HMGCS1Q01581 uc_338.4-201ENST00000616635 176 ntBASIC0.48□□□□□ -2.33
HMGCS1Q01581 AL160413.1-201ENST00000622780 310 ntBASIC0.48□□□□□ -2.33
HMGCS1Q01581 MIR1-1-201ENST00000362147 71 ntBASIC0.47□□□□□ -2.33
HMGCS1Q01581 RNU6-1272P-201ENST00000362776 107 ntBASIC0.47□□□□□ -2.33
HMGCS1Q01581 Y_RNA.138-201ENST00000363462 102 ntBASIC0.47□□□□□ -2.33
HMGCS1Q01581 RNU4-10P-201ENST00000364383 140 ntBASIC0.47□□□□□ -2.33
HMGCS1Q01581 RNU6-290P-201ENST00000365212 101 ntBASIC0.47□□□□□ -2.33
HMGCS1Q01581 SNORA22B-201ENST00000383876 138 ntBASIC0.47□□□□□ -2.33
HMGCS1Q01581 SNORD105-201ENST00000386910 85 ntBASIC0.47□□□□□ -2.33
HMGCS1Q01581 RNU1-119P-201ENST00000391122 165 ntBASIC0.47□□□□□ -2.33
HMGCS1Q01581 AC015818.7-201ENST00000428754 109 ntBASIC0.47□□□□□ -2.33
HMGCS1Q01581 AC087499.7-201ENST00000441958 109 ntBASIC0.47□□□□□ -2.33
HMGCS1Q01581 AC023449.1-201ENST00000454464 154 ntBASIC0.47□□□□□ -2.33
HMGCS1Q01581 snoU13.18-201ENST00000459483 104 ntBASIC0.47□□□□□ -2.33
HMGCS1Q01581 Y_RNA.631-201ENST00000459607 101 ntBASIC0.47□□□□□ -2.33
HMGCS1Q01581 RNY3P15-201ENST00000516297 97 ntBASIC0.47□□□□□ -2.33
HMGCS1Q01581 RNU2-31P-201ENST00000516954 155 ntBASIC0.47□□□□□ -2.33
HMGCS1Q01581 RNU6-988P-201ENST00000519081 107 ntBASIC0.47□□□□□ -2.33
HMGCS1Q01581 AC007751.1-201ENST00000529260 376 ntBASIC0.47□□□□□ -2.33
HMGCS1Q01581 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.47□□□□□ -2.33
HMGCS1Q01581 MIR6513-201ENST00000621188 64 ntBASIC0.47□□□□□ -2.33
HMGCS1Q01581 Y_RNA.14-201ENST00000362415 103 ntBASIC0.46□□□□□ -2.34
HMGCS1Q01581 Y_RNA.19-201ENST00000362462 99 ntBASIC0.46□□□□□ -2.34
HMGCS1Q01581 RNU6-770P-201ENST00000363929 105 ntBASIC0.46□□□□□ -2.34
HMGCS1Q01581 Y_RNA.216-201ENST00000364205 93 ntBASIC0.46□□□□□ -2.34
HMGCS1Q01581 Y_RNA.293-201ENST00000364908 93 ntBASIC0.46□□□□□ -2.34
HMGCS1Q01581 RNU6-580P-201ENST00000365159 107 ntBASIC0.46□□□□□ -2.34
HMGCS1Q01581 Y_RNA.486-201ENST00000384398 107 ntBASIC0.46□□□□□ -2.34
HMGCS1Q01581 Y_RNA.527-201ENST00000384573 102 ntBASIC0.46□□□□□ -2.34
HMGCS1Q01581 BTF3P11-201ENST00000426582 477 ntBASIC0.46□□□□□ -2.34
HMGCS1Q01581 AC244023.1-201ENST00000426884 112 ntBASIC0.46□□□□□ -2.34
HMGCS1Q01581 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.46□□□□□ -2.34
HMGCS1Q01581 RNU6-1132P-201ENST00000459214 107 ntBASIC0.46□□□□□ -2.34
HMGCS1Q01581 AC091959.1-201ENST00000495857 238 ntBASIC0.46□□□□□ -2.34
HMGCS1Q01581 SCARNA8-201ENST00000515924 131 ntBASIC0.46□□□□□ -2.34
HMGCS1Q01581 RNA5SP436-201ENST00000516020 115 ntBASIC0.46□□□□□ -2.34
HMGCS1Q01581 SNORA40.15-201ENST00000516884 107 ntBASIC0.46□□□□□ -2.34
HMGCS1Q01581 Y_RNA.721-201ENST00000517207 102 ntBASIC0.46□□□□□ -2.34
HMGCS1Q01581 AC131281.1-201ENST00000522984 164 ntBASIC0.46□□□□□ -2.34
HMGCS1Q01581 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.46□□□□□ -2.34
HMGCS1Q01581 AC242498.1-201ENST00000604134 111 ntBASIC0.46□□□□□ -2.34
HMGCS1Q01581 AL136317.1-201ENST00000612653 226 ntBASIC0.46□□□□□ -2.34
HMGCS1Q01581 MIR367-201ENST00000362299 68 ntBASIC0.45□□□□□ -2.34
HMGCS1Q01581 Y_RNA.16-201ENST00000362421 102 ntBASIC0.45□□□□□ -2.34
HMGCS1Q01581 Y_RNA.64-201ENST00000362845 102 ntBASIC0.45□□□□□ -2.34
HMGCS1Q01581 Y_RNA.210-201ENST00000364161 110 ntBASIC0.45□□□□□ -2.34
HMGCS1Q01581 Y_RNA.241-201ENST00000364470 117 ntBASIC0.45□□□□□ -2.34
HMGCS1Q01581 Y_RNA.242-201ENST00000364473 110 ntBASIC0.45□□□□□ -2.34
HMGCS1Q01581 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
HMGCS1Q01581 RNY1P8-201ENST00000383970 114 ntBASIC0.45□□□□□ -2.34
HMGCS1Q01581 RNA5SP496-201ENST00000391240 109 ntBASIC0.45□□□□□ -2.34
HMGCS1Q01581 RNA5SP222-201ENST00000411039 105 ntBASIC0.45□□□□□ -2.34
HMGCS1Q01581 SNORD83.1-201ENST00000411362 77 ntBASIC0.45□□□□□ -2.34
HMGCS1Q01581 AC098934.3-201ENST00000430450 190 ntBASIC0.45□□□□□ -2.34
HMGCS1Q01581 MIR4724-201ENST00000579485 89 ntBASIC0.45□□□□□ -2.34
HMGCS1Q01581 AL008718.3-201ENST00000610217 321 ntBASIC0.45□□□□□ -2.34
HMGCS1Q01581 snoU18.1-201ENST00000629629 71 ntBASIC0.45□□□□□ -2.34
HMGCS1Q01581 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
HMGCS1Q01581 SNORA25.1-201ENST00000362326 128 ntBASIC0.44□□□□□ -2.34
HMGCS1Q01581 Y_RNA.128-201ENST00000363391 112 ntBASIC0.44□□□□□ -2.34
HMGCS1Q01581 SNORD18A-201ENST00000363753 72 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 196.2 ms