Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC002984.1-201ENST00000591692 448 ntBASIC2.49□□□□□ -2.01
EPHB3P54753 SNORD115-40-201ENST00000606510 82 ntBASIC2.49□□□□□ -2.01
EPHB3P54753 MIR3670-4-201ENST00000612260 65 ntBASIC2.49□□□□□ -2.01
EPHB3P54753 AC091932.4-201ENST00000623386 200 ntBASIC2.49□□□□□ -2.01
EPHB3P54753 SNORA38-201ENST00000363946 132 ntBASIC2.48□□□□□ -2.01
EPHB3P54753 SNORA25B-201ENST00000365507 128 ntBASIC2.48□□□□□ -2.01
EPHB3P54753 Y_RNA.454-201ENST00000384224 113 ntBASIC2.48□□□□□ -2.01
EPHB3P54753 AL627390.1-201ENST00000396055 340 ntBASIC2.48□□□□□ -2.01
EPHB3P54753 MIR1912-201ENST00000410389 80 ntBASIC2.48□□□□□ -2.01
EPHB3P54753 RN7SKP223-201ENST00000410582 62 ntBASIC2.48□□□□□ -2.01
EPHB3P54753 RNU2-35P-201ENST00000516446 142 ntBASIC2.48□□□□□ -2.01
EPHB3P54753 RNU7-28P-201ENST00000516759 62 ntBASIC2.48□□□□□ -2.01
EPHB3P54753 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
EPHB3P54753 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.48□□□□□ -2.01
EPHB3P54753 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.48□□□□□ -2.01
EPHB3P54753 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.47□□□□□ -2.01
EPHB3P54753 Y_RNA.107-201ENST00000363190 121 ntBASIC2.47□□□□□ -2.01
EPHB3P54753 Y_RNA.265-201ENST00000364677 108 ntBASIC2.47□□□□□ -2.01
EPHB3P54753 Y_RNA.342-201ENST00000365352 113 ntBASIC2.47□□□□□ -2.01
EPHB3P54753 Y_RNA.351-201ENST00000365436 96 ntBASIC2.47□□□□□ -2.01
EPHB3P54753 SNORA80E-201ENST00000384744 137 ntBASIC2.47□□□□□ -2.01
EPHB3P54753 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.47□□□□□ -2.01
EPHB3P54753 SNORA18.7-201ENST00000516910 131 ntBASIC2.47□□□□□ -2.01
EPHB3P54753 MIR1273D-201ENST00000577266 86 ntBASIC2.47□□□□□ -2.01
EPHB3P54753 MIR4778-201ENST00000577635 80 ntBASIC2.47□□□□□ -2.01
EPHB3P54753 MIR4648-201ENST00000580107 72 ntBASIC2.47□□□□□ -2.01
EPHB3P54753 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
EPHB3P54753 AL442644.1-201ENST00000454390 3105 ntBASIC2.47□□□□□ -2.01
EPHB3P54753 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.47□□□□□ -2.01
EPHB3P54753 RNA5SP173-201ENST00000364857 136 ntBASIC2.46□□□□□ -2.02
EPHB3P54753 RNU6-820P-201ENST00000384273 107 ntBASIC2.46□□□□□ -2.02
EPHB3P54753 MIR450A2-201ENST00000385022 100 ntBASIC2.46□□□□□ -2.02
EPHB3P54753 RPS12P2-201ENST00000439728 269 ntBASIC2.46□□□□□ -2.02
EPHB3P54753 AC107297.1-201ENST00000459991 176 ntBASIC2.46□□□□□ -2.02
EPHB3P54753 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.46□□□□□ -2.02
EPHB3P54753 SNORA31.15-201ENST00000516771 132 ntBASIC2.46□□□□□ -2.02
EPHB3P54753 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
EPHB3P54753 AC078899.2-201ENST00000595282 212 ntBASIC2.46□□□□□ -2.02
EPHB3P54753 AC067747.1-201ENST00000608026 250 ntBASIC2.46□□□□□ -2.02
EPHB3P54753 AC015726.2-201ENST00000620112 122 ntBASIC2.46□□□□□ -2.02
EPHB3P54753 MIR6873-201ENST00000622788 63 ntBASIC2.46□□□□□ -2.02
EPHB3P54753 FO624990.1-201ENST00000636373 85 ntBASIC2.46□□□□□ -2.02
EPHB3P54753 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.46□□□□□ -2.02
EPHB3P54753 RNU6-862P-201ENST00000362804 105 ntBASIC2.45□□□□□ -2.02
EPHB3P54753 RNU6-1152P-201ENST00000384576 107 ntBASIC2.45□□□□□ -2.02
EPHB3P54753 RNU6-816P-201ENST00000390914 107 ntBASIC2.45□□□□□ -2.02
EPHB3P54753 RNU6-1268P-201ENST00000391214 107 ntBASIC2.45□□□□□ -2.02
EPHB3P54753 RNU6-1239P-201ENST00000391310 107 ntBASIC2.45□□□□□ -2.02
EPHB3P54753 MIR1262-201ENST00000408276 93 ntBASIC2.45□□□□□ -2.02
EPHB3P54753 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.45□□□□□ -2.02
EPHB3P54753 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
EPHB3P54753 RPL39P25-201ENST00000449384 154 ntBASIC2.45□□□□□ -2.02
EPHB3P54753 snoU13.26-201ENST00000459452 105 ntBASIC2.45□□□□□ -2.02
EPHB3P54753 RNU6-638P-201ENST00000516582 104 ntBASIC2.45□□□□□ -2.02
EPHB3P54753 MIR5007-201ENST00000583098 95 ntBASIC2.45□□□□□ -2.02
EPHB3P54753 AL049779.4-201ENST00000604500 156 ntBASIC2.45□□□□□ -2.02
EPHB3P54753 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.45□□□□□ -2.02
EPHB3P54753 AC010297.1-201ENST00000623948 149 ntBASIC2.45□□□□□ -2.02
EPHB3P54753 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
EPHB3P54753 SNORA25.6-201ENST00000364121 118 ntBASIC2.44□□□□□ -2.02
EPHB3P54753 RNU4-36P-201ENST00000364294 144 ntBASIC2.44□□□□□ -2.02
EPHB3P54753 RNU1-138P-201ENST00000384093 164 ntBASIC2.44□□□□□ -2.02
EPHB3P54753 AC245047.3-201ENST00000429428 127 ntBASIC2.44□□□□□ -2.02
EPHB3P54753 AL606517.2-201ENST00000442855 241 ntBASIC2.44□□□□□ -2.02
EPHB3P54753 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.44□□□□□ -2.02
EPHB3P54753 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.44□□□□□ -2.02
EPHB3P54753 MIR1245B-201ENST00000636115 69 ntBASIC2.44□□□□□ -2.02
EPHB3P54753 SNORA63D-201ENST00000364359 132 ntBASIC2.43□□□□□ -2.02
EPHB3P54753 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.43□□□□□ -2.02
EPHB3P54753 SCARNA23-201ENST00000516060 130 ntBASIC2.43□□□□□ -2.02
EPHB3P54753 AC026421.1-201ENST00000519101 163 ntBASIC2.43□□□□□ -2.02
EPHB3P54753 DEFB131E-201ENST00000532329 154 ntBASIC2.43□□□□□ -2.02
EPHB3P54753 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.43□□□□□ -2.02
EPHB3P54753 MIR3169-201ENST00000578032 83 ntBASIC2.43□□□□□ -2.02
EPHB3P54753 HSPE1P19-201ENST00000603327 295 ntBASIC2.43□□□□□ -2.02
EPHB3P54753 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
EPHB3P54753 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
EPHB3P54753 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
EPHB3P54753 RNU6-661P-201ENST00000362409 107 ntBASIC2.42□□□□□ -2.02
EPHB3P54753 RNY3P2-201ENST00000362918 102 ntBASIC2.42□□□□□ -2.02
EPHB3P54753 SNORD115-19-201ENST00000363098 82 ntBASIC2.42□□□□□ -2.02
EPHB3P54753 SNORD115-18-201ENST00000363293 82 ntBASIC2.42□□□□□ -2.02
EPHB3P54753 RNA5SP393-201ENST00000363423 117 ntBASIC2.42□□□□□ -2.02
EPHB3P54753 RNU6-1099P-201ENST00000363533 107 ntBASIC2.42□□□□□ -2.02
EPHB3P54753 RNA5SP493-201ENST00000364115 91 ntBASIC2.42□□□□□ -2.02
EPHB3P54753 SNORD115-17-201ENST00000364612 82 ntBASIC2.42□□□□□ -2.02
EPHB3P54753 RNU4-16P-201ENST00000364737 141 ntBASIC2.42□□□□□ -2.02
EPHB3P54753 RNU1-52P-201ENST00000384190 164 ntBASIC2.42□□□□□ -2.02
EPHB3P54753 SNORD38C-201ENST00000384381 69 ntBASIC2.42□□□□□ -2.02
EPHB3P54753 RNA5SP144-201ENST00000410846 116 ntBASIC2.42□□□□□ -2.02
EPHB3P54753 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.42□□□□□ -2.02
EPHB3P54753 SUMO1P4-201ENST00000429430 302 ntBASIC2.42□□□□□ -2.02
EPHB3P54753 AL035398.1-201ENST00000430869 322 ntBASIC2.42□□□□□ -2.02
EPHB3P54753 snoU13.15-201ENST00000459407 104 ntBASIC2.42□□□□□ -2.02
EPHB3P54753 UBL5P3-201ENST00000475112 231 ntBASIC2.42□□□□□ -2.02
EPHB3P54753 Y_RNA.685-201ENST00000516532 108 ntBASIC2.42□□□□□ -2.02
EPHB3P54753 RNU7-6P-201ENST00000516845 62 ntBASIC2.42□□□□□ -2.02
EPHB3P54753 AC087741.2-201ENST00000619415 172 ntBASIC2.42□□□□□ -2.02
EPHB3P54753 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
EPHB3P54753 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 220 ms