Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 RNU1-133P-201ENST00000364867 167 ntBASIC2.15□□□□□ -2.07
ATF4P18848 SNORD1A-201ENST00000364968 72 ntBASIC2.15□□□□□ -2.07
ATF4P18848 EEF1A1P41-201ENST00000414667 207 ntBASIC2.15□□□□□ -2.07
ATF4P18848 HMGN2P38-201ENST00000423806 265 ntBASIC2.15□□□□□ -2.07
ATF4P18848 UBE2DNL-203ENST00000474922 222 ntBASIC2.15□□□□□ -2.07
ATF4P18848 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.15□□□□□ -2.07
ATF4P18848 MIR4764-201ENST00000580680 88 ntBASIC2.15□□□□□ -2.07
ATF4P18848 GHRLOS.1-201ENST00000610995 70 ntBASIC2.15□□□□□ -2.07
ATF4P18848 AL137790.1-201ENST00000634283 177 ntBASIC2.15□□□□□ -2.07
ATF4P18848 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
ATF4P18848 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.15□□□□□ -2.07
ATF4P18848 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
ATF4P18848 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
ATF4P18848 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
ATF4P18848 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
ATF4P18848 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
ATF4P18848 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
ATF4P18848 SNORA5B-201ENST00000363786 132 ntBASIC2.14□□□□□ -2.07
ATF4P18848 Y_RNA.537-201ENST00000384626 109 ntBASIC2.14□□□□□ -2.07
ATF4P18848 AC234781.5-201ENST00000508429 271 ntBASIC2.14□□□□□ -2.07
ATF4P18848 RNU5E-3P-201ENST00000515913 68 ntBASIC2.14□□□□□ -2.07
ATF4P18848 Y_RNA.686-201ENST00000516548 134 ntBASIC2.14□□□□□ -2.07
ATF4P18848 MIR3937-201ENST00000580135 106 ntBASIC2.14□□□□□ -2.07
ATF4P18848 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
ATF4P18848 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
ATF4P18848 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.13□□□□□ -2.07
ATF4P18848 SNORD28B-201ENST00000390993 75 ntBASIC2.13□□□□□ -2.07
ATF4P18848 AL035398.1-201ENST00000430869 322 ntBASIC2.13□□□□□ -2.07
ATF4P18848 RPS29P29-201ENST00000456396 171 ntBASIC2.13□□□□□ -2.07
ATF4P18848 RNU6-406P-201ENST00000516470 107 ntBASIC2.13□□□□□ -2.07
ATF4P18848 RNU7-53P-201ENST00000516705 60 ntBASIC2.13□□□□□ -2.07
ATF4P18848 MIR4672-201ENST00000583126 81 ntBASIC2.13□□□□□ -2.07
ATF4P18848 AC243994.1-201ENST00000618627 109 ntBASIC2.13□□□□□ -2.07
ATF4P18848 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
ATF4P18848 RNU6-81P-201ENST00000365608 104 ntBASIC2.12□□□□□ -2.07
ATF4P18848 SNORA51.10-201ENST00000384418 136 ntBASIC2.12□□□□□ -2.07
ATF4P18848 MIR9-1-201ENST00000385198 89 ntBASIC2.12□□□□□ -2.07
ATF4P18848 RNA5SP184-201ENST00000411071 108 ntBASIC2.12□□□□□ -2.07
ATF4P18848 RNU6-1211P-201ENST00000459179 105 ntBASIC2.12□□□□□ -2.07
ATF4P18848 RNU6-998P-201ENST00000515894 101 ntBASIC2.12□□□□□ -2.07
ATF4P18848 RNA5SP236-201ENST00000516169 116 ntBASIC2.12□□□□□ -2.07
ATF4P18848 RNU6-113P-201ENST00000516653 101 ntBASIC2.12□□□□□ -2.07
ATF4P18848 MIR4422-201ENST00000581938 83 ntBASIC2.12□□□□□ -2.07
ATF4P18848 MIR4298-201ENST00000584380 73 ntBASIC2.12□□□□□ -2.07
ATF4P18848 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
ATF4P18848 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.11□□□□□ -2.07
ATF4P18848 MIR302D-201ENST00000362275 68 ntBASIC2.11□□□□□ -2.07
ATF4P18848 Y_RNA.494-201ENST00000384432 111 ntBASIC2.11□□□□□ -2.07
ATF4P18848 RNU6-958P-201ENST00000516995 106 ntBASIC2.11□□□□□ -2.07
ATF4P18848 RNU2-60P-201ENST00000517290 128 ntBASIC2.11□□□□□ -2.07
ATF4P18848 AC019176.1-201ENST00000518519 225 ntBASIC2.11□□□□□ -2.07
ATF4P18848 GTF3AP2-201ENST00000557014 266 ntBASIC2.11□□□□□ -2.07
ATF4P18848 AL033523.1-201ENST00000605153 153 ntBASIC2.11□□□□□ -2.07
ATF4P18848 AL022345.2-201ENST00000606307 135 ntBASIC2.11□□□□□ -2.07
ATF4P18848 MIR4791-201ENST00000607666 84 ntBASIC2.11□□□□□ -2.07
ATF4P18848 AL596211.1-201ENST00000569873 2277 ntBASIC2.11□□□□□ -2.07
ATF4P18848 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ATF4P18848 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
ATF4P18848 RNU6-309P-201ENST00000364573 106 ntBASIC2.1□□□□□ -2.07
ATF4P18848 AL513328.1-201ENST00000446460 224 ntBASIC2.1□□□□□ -2.07
ATF4P18848 RPL39P39-201ENST00000455840 151 ntBASIC2.1□□□□□ -2.07
ATF4P18848 RNU2-13P-201ENST00000515909 113 ntBASIC2.1□□□□□ -2.07
ATF4P18848 SNORD111.1-201ENST00000516421 86 ntBASIC2.1□□□□□ -2.07
ATF4P18848 MIR3121-201ENST00000579680 77 ntBASIC2.1□□□□□ -2.07
ATF4P18848 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.1□□□□□ -2.07
ATF4P18848 MIR4448-201ENST00000584360 86 ntBASIC2.1□□□□□ -2.07
ATF4P18848 AC091932.4-201ENST00000623386 200 ntBASIC2.1□□□□□ -2.07
ATF4P18848 AC008133.2-201ENST00000624540 351 ntBASIC2.1□□□□□ -2.07
ATF4P18848 AP000553.5-201ENST00000641933 54 ntBASIC2.1□□□□□ -2.07
ATF4P18848 SNORD41-201ENST00000386967 70 ntBASIC2.09□□□□□ -2.07
ATF4P18848 RNU1-78P-201ENST00000391248 165 ntBASIC2.09□□□□□ -2.07
ATF4P18848 MIR934-201ENST00000401241 83 ntBASIC2.09□□□□□ -2.07
ATF4P18848 RNU2-11P-201ENST00000459191 187 ntBASIC2.09□□□□□ -2.07
ATF4P18848 RPL30P7-201ENST00000479312 323 ntBASIC2.09□□□□□ -2.07
ATF4P18848 RNU6-250P-201ENST00000516958 103 ntBASIC2.09□□□□□ -2.07
ATF4P18848 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.09□□□□□ -2.07
ATF4P18848 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
ATF4P18848 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
ATF4P18848 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
ATF4P18848 MIR570-201ENST00000384917 97 ntBASIC2.08□□□□□ -2.08
ATF4P18848 AL359511.1-201ENST00000402970 211 ntBASIC2.08□□□□□ -2.08
ATF4P18848 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.08□□□□□ -2.08
ATF4P18848 AC027119.1-201ENST00000440877 241 ntBASIC2.08□□□□□ -2.08
ATF4P18848 RNU6-971P-201ENST00000516920 106 ntBASIC2.08□□□□□ -2.08
ATF4P18848 MIR4635-201ENST00000583759 79 ntBASIC2.08□□□□□ -2.08
ATF4P18848 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
ATF4P18848 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
ATF4P18848 RNU6-647P-201ENST00000364243 107 ntBASIC2.07□□□□□ -2.08
ATF4P18848 SNORA24-201ENST00000384096 131 ntBASIC2.07□□□□□ -2.08
ATF4P18848 RNU6-959P-201ENST00000384671 107 ntBASIC2.07□□□□□ -2.08
ATF4P18848 AC087499.2-201ENST00000432861 149 ntBASIC2.07□□□□□ -2.08
ATF4P18848 snoU13.16-201ENST00000459350 104 ntBASIC2.07□□□□□ -2.08
ATF4P18848 RPL23AP94-201ENST00000512518 302 ntBASIC2.07□□□□□ -2.08
ATF4P18848 RNU6-947P-201ENST00000516264 106 ntBASIC2.07□□□□□ -2.08
ATF4P18848 RNA5SP364-201ENST00000516938 78 ntBASIC2.07□□□□□ -2.08
ATF4P18848 AC002984.1-201ENST00000591692 448 ntBASIC2.07□□□□□ -2.08
ATF4P18848 AC062016.1-201ENST00000355719 319 ntBASIC2.06□□□□□ -2.08
ATF4P18848 RNA5SP37-201ENST00000365420 130 ntBASIC2.06□□□□□ -2.08
ATF4P18848 RNY1P6-201ENST00000384193 109 ntBASIC2.06□□□□□ -2.08
ATF4P18848 RNA5SP261-201ENST00000410536 106 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 432.3 ms