Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MIR548O-201ENST00000408583 114 ntBASIC-0.96□□□□□ -2.56
CXCL1P09341 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.96□□□□□ -2.56
CXCL1P09341 RNU6-584P-201ENST00000410350 95 ntBASIC-0.96□□□□□ -2.56
CXCL1P09341 AL365203.2-201ENST00000423444 196 ntBASIC-0.96□□□□□ -2.56
CXCL1P09341 RPS29P24-201ENST00000486345 171 ntBASIC-0.96□□□□□ -2.56
CXCL1P09341 AC084368.1-201ENST00000620935 65 ntBASIC-0.96□□□□□ -2.56
CXCL1P09341 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.97□□□□□ -2.56
CXCL1P09341 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.97□□□□□ -2.56
CXCL1P09341 SNORD116-11-201ENST00000383882 92 ntBASIC-0.97□□□□□ -2.56
CXCL1P09341 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.97□□□□□ -2.56
CXCL1P09341 AC096949.1-201ENST00000412047 152 ntBASIC-0.97□□□□□ -2.56
CXCL1P09341 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-0.97□□□□□ -2.56
CXCL1P09341 SNORD11-201ENST00000459124 84 ntBASIC-0.97□□□□□ -2.56
CXCL1P09341 RNU7-115P-201ENST00000516433 55 ntBASIC-0.97□□□□□ -2.56
CXCL1P09341 MIR2355-201ENST00000517199 87 ntBASIC-0.97□□□□□ -2.56
CXCL1P09341 AL360085.1-201ENST00000604713 532 ntBASIC-0.97□□□□□ -2.56
CXCL1P09341 AP001282.2-201ENST00000616149 309 ntBASIC-0.97□□□□□ -2.56
CXCL1P09341 AP000720.1-201ENST00000625091 483 ntBASIC-0.97□□□□□ -2.56
CXCL1P09341 AC068137.3-201ENST00000639191 341 ntBASIC-0.97□□□□□ -2.56
CXCL1P09341 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.98□□□□□ -2.57
CXCL1P09341 SNORA27-201ENST00000384323 126 ntBASIC-0.98□□□□□ -2.57
CXCL1P09341 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.98□□□□□ -2.57
CXCL1P09341 MTATP6P26-201ENST00000445926 662 ntBASIC-0.98□□□□□ -2.57
CXCL1P09341 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.99□□□□□ -2.57
CXCL1P09341 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.99□□□□□ -2.57
CXCL1P09341 RNU6-926P-201ENST00000384075 107 ntBASIC-0.99□□□□□ -2.57
CXCL1P09341 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.99□□□□□ -2.57
CXCL1P09341 RNU6-842P-201ENST00000384269 107 ntBASIC-0.99□□□□□ -2.57
CXCL1P09341 MIR7-2-201ENST00000384970 110 ntBASIC-0.99□□□□□ -2.57
CXCL1P09341 RNA5SP237-201ENST00000410414 113 ntBASIC-0.99□□□□□ -2.57
CXCL1P09341 RNU4-55P-201ENST00000410731 137 ntBASIC-0.99□□□□□ -2.57
CXCL1P09341 RNU6-758P-201ENST00000516292 89 ntBASIC-0.99□□□□□ -2.57
CXCL1P09341 SCARNA1-201ENST00000517138 166 ntBASIC-0.99□□□□□ -2.57
CXCL1P09341 AC108676.2-201ENST00000605225 163 ntBASIC-0.99□□□□□ -2.57
CXCL1P09341 AL133255.1-201ENST00000606374 441 ntBASIC-0.99□□□□□ -2.57
CXCL1P09341 AC005014.2-201ENST00000607795 599 ntBASIC-0.99□□□□□ -2.57
CXCL1P09341 AC027449.1-201ENST00000608890 407 ntBASIC-0.99□□□□□ -2.57
CXCL1P09341 Y_RNA.48-201ENST00000362710 103 ntBASIC-1□□□□□ -2.57
CXCL1P09341 RNU4-50P-201ENST00000364361 141 ntBASIC-1□□□□□ -2.57
CXCL1P09341 Y_RNA.296-201ENST00000364930 108 ntBASIC-1□□□□□ -2.57
CXCL1P09341 Y_RNA.373-201ENST00000365600 103 ntBASIC-1□□□□□ -2.57
CXCL1P09341 MIR548L-201ENST00000408303 86 ntBASIC-1□□□□□ -2.57
CXCL1P09341 MIR548I3-201ENST00000408378 149 ntBASIC-1□□□□□ -2.57
CXCL1P09341 AL022718.1-201ENST00000412004 84 ntBASIC-1□□□□□ -2.57
CXCL1P09341 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1□□□□□ -2.57
CXCL1P09341 RNU6-1194P-201ENST00000516208 104 ntBASIC-1□□□□□ -2.57
CXCL1P09341 RNU6-155P-201ENST00000516347 100 ntBASIC-1□□□□□ -2.57
CXCL1P09341 AC018462.2-201ENST00000605375 395 ntBASIC-1□□□□□ -2.57
CXCL1P09341 MTND5P32-201ENST00000560711 1802 ntBASIC-1.01□□□□□ -2.57
CXCL1P09341 SNORD115-28-201ENST00000363931 81 ntBASIC-1.01□□□□□ -2.57
CXCL1P09341 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.01□□□□□ -2.57
CXCL1P09341 SNORA72.6-201ENST00000384520 129 ntBASIC-1.01□□□□□ -2.57
CXCL1P09341 SNORD77.3-201ENST00000391113 65 ntBASIC-1.01□□□□□ -2.57
CXCL1P09341 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.01□□□□□ -2.57
CXCL1P09341 RNU6-938P-201ENST00000411285 103 ntBASIC-1.01□□□□□ -2.57
CXCL1P09341 MTATP6P17-201ENST00000431030 672 ntBASIC-1.01□□□□□ -2.57
CXCL1P09341 MTND2P22-201ENST00000444325 1033 ntBASIC-1.01□□□□□ -2.57
CXCL1P09341 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.01□□□□□ -2.57
CXCL1P09341 AC074198.2-201ENST00000508153 258 ntBASIC-1.01□□□□□ -2.57
CXCL1P09341 AC073648.5-201ENST00000603502 305 ntBASIC-1.01□□□□□ -2.57
CXCL1P09341 MIR548AY-201ENST00000617669 107 ntBASIC-1.01□□□□□ -2.57
CXCL1P09341 Z69908.1-201ENST00000622603 247 ntBASIC-1.01□□□□□ -2.57
CXCL1P09341 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.02□□□□□ -2.57
CXCL1P09341 RNA5SP245-201ENST00000364239 121 ntBASIC-1.02□□□□□ -2.57
CXCL1P09341 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.02□□□□□ -2.57
CXCL1P09341 SNORD41.1-201ENST00000391000 69 ntBASIC-1.02□□□□□ -2.57
CXCL1P09341 SNORD5.1-201ENST00000458800 75 ntBASIC-1.02□□□□□ -2.57
CXCL1P09341 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.02□□□□□ -2.57
CXCL1P09341 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.03□□□□□ -2.57
CXCL1P09341 SNORD116-9-201ENST00000384000 95 ntBASIC-1.03□□□□□ -2.57
CXCL1P09341 SNORD116-3-201ENST00000384287 95 ntBASIC-1.03□□□□□ -2.57
CXCL1P09341 SNORD116-8-201ENST00000384365 95 ntBASIC-1.03□□□□□ -2.57
CXCL1P09341 SNORD116-7-201ENST00000384404 95 ntBASIC-1.03□□□□□ -2.57
CXCL1P09341 SNORD116-5-201ENST00000384462 95 ntBASIC-1.03□□□□□ -2.57
CXCL1P09341 RNU4-63P-201ENST00000411313 118 ntBASIC-1.03□□□□□ -2.57
CXCL1P09341 Z95118.1-201ENST00000421372 247 ntBASIC-1.03□□□□□ -2.57
CXCL1P09341 AC108059.2-201ENST00000434626 151 ntBASIC-1.03□□□□□ -2.57
CXCL1P09341 AC244505.6-201ENST00000452829 130 ntBASIC-1.03□□□□□ -2.57
CXCL1P09341 RNU7-96P-201ENST00000459535 64 ntBASIC-1.03□□□□□ -2.57
CXCL1P09341 SNORA25.13-201ENST00000516395 103 ntBASIC-1.03□□□□□ -2.57
CXCL1P09341 AL080274.1-201ENST00000605565 220 ntBASIC-1.03□□□□□ -2.57
CXCL1P09341 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.04□□□□□ -2.58
CXCL1P09341 RNU6-653P-201ENST00000363074 106 ntBASIC-1.04□□□□□ -2.58
CXCL1P09341 SNORD95.1-201ENST00000364099 68 ntBASIC-1.04□□□□□ -2.58
CXCL1P09341 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.04□□□□□ -2.58
CXCL1P09341 Y_RNA.615-201ENST00000410769 117 ntBASIC-1.04□□□□□ -2.58
CXCL1P09341 RNU6-1068P-201ENST00000410958 103 ntBASIC-1.04□□□□□ -2.58
CXCL1P09341 RN7SKP142-201ENST00000411236 328 ntBASIC-1.04□□□□□ -2.58
CXCL1P09341 AF228730.4-201ENST00000421457 183 ntBASIC-1.04□□□□□ -2.58
CXCL1P09341 RNA5SP66-201ENST00000517178 101 ntBASIC-1.04□□□□□ -2.58
CXCL1P09341 AC141846.1-201ENST00000568348 142 ntBASIC-1.04□□□□□ -2.58
CXCL1P09341 AC011373.1-201ENST00000607270 237 ntBASIC-1.04□□□□□ -2.58
CXCL1P09341 AC245008.1-201ENST00000608123 476 ntBASIC-1.04□□□□□ -2.58
CXCL1P09341 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-1.04□□□□□ -2.58
CXCL1P09341 MIR6717-201ENST00000622747 73 ntBASIC-1.04□□□□□ -2.58
CXCL1P09341 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.05□□□□□ -2.58
CXCL1P09341 U8.6-201ENST00000364939 135 ntBASIC-1.05□□□□□ -2.58
CXCL1P09341 Y_RNA.414-201ENST00000384011 101 ntBASIC-1.05□□□□□ -2.58
CXCL1P09341 Y_RNA.466-201ENST00000384294 113 ntBASIC-1.05□□□□□ -2.58
CXCL1P09341 SNORD110-201ENST00000408189 75 ntBASIC-1.05□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 231.2 ms