Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 AC015726.2-201ENST00000620112 122 ntBASIC1.48□□□□□ -2.17
ITM2AO43736 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
ITM2AO43736 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
ITM2AO43736 SNORD1A-201ENST00000364968 72 ntBASIC1.47□□□□□ -2.17
ITM2AO43736 SNORD116-18-201ENST00000383961 92 ntBASIC1.47□□□□□ -2.17
ITM2AO43736 SNORD38C-201ENST00000384381 69 ntBASIC1.47□□□□□ -2.17
ITM2AO43736 Y_RNA.506-201ENST00000384494 102 ntBASIC1.47□□□□□ -2.17
ITM2AO43736 Y_RNA.521-201ENST00000384560 114 ntBASIC1.47□□□□□ -2.17
ITM2AO43736 SNORD77.3-201ENST00000391113 65 ntBASIC1.47□□□□□ -2.17
ITM2AO43736 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.47□□□□□ -2.17
ITM2AO43736 snoU13.9-201ENST00000458927 103 ntBASIC1.47□□□□□ -2.17
ITM2AO43736 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.47□□□□□ -2.17
ITM2AO43736 MIR4255-201ENST00000579351 72 ntBASIC1.47□□□□□ -2.17
ITM2AO43736 FAM106DP-201ENST00000586416 501 ntBASIC1.47□□□□□ -2.17
ITM2AO43736 AL365205.2-201ENST00000594586 68 ntBASIC1.47□□□□□ -2.17
ITM2AO43736 MIR502-201ENST00000606349 86 ntBASIC1.47□□□□□ -2.17
ITM2AO43736 AL365434.2-201ENST00000607979 234 ntBASIC1.47□□□□□ -2.17
ITM2AO43736 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
ITM2AO43736 Y_RNA.37-201ENST00000362606 108 ntBASIC1.46□□□□□ -2.18
ITM2AO43736 RNU6-449P-201ENST00000383914 107 ntBASIC1.46□□□□□ -2.18
ITM2AO43736 Y_RNA.494-201ENST00000384432 111 ntBASIC1.46□□□□□ -2.18
ITM2AO43736 MIR136-201ENST00000385207 82 ntBASIC1.46□□□□□ -2.18
ITM2AO43736 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
ITM2AO43736 RNU7-200P-201ENST00000516105 62 ntBASIC1.46□□□□□ -2.18
ITM2AO43736 RNU6-970P-201ENST00000516312 107 ntBASIC1.46□□□□□ -2.18
ITM2AO43736 AC090049.2-201ENST00000550377 109 ntBASIC1.46□□□□□ -2.18
ITM2AO43736 MIR3129-201ENST00000581095 76 ntBASIC1.46□□□□□ -2.18
ITM2AO43736 DNAJC19P2-201ENST00000593340 302 ntBASIC1.46□□□□□ -2.18
ITM2AO43736 BX248123.2-201ENST00000606318 124 ntBASIC1.46□□□□□ -2.18
ITM2AO43736 MIR8063-201ENST00000621930 81 ntBASIC1.46□□□□□ -2.18
ITM2AO43736 SNORD115-28-201ENST00000363931 81 ntBASIC1.45□□□□□ -2.18
ITM2AO43736 RNU1-42P-201ENST00000364033 160 ntBASIC1.45□□□□□ -2.18
ITM2AO43736 RNU6-151P-201ENST00000364158 107 ntBASIC1.45□□□□□ -2.18
ITM2AO43736 SNORA2.2-201ENST00000365473 135 ntBASIC1.45□□□□□ -2.18
ITM2AO43736 SNORD41-201ENST00000386967 70 ntBASIC1.45□□□□□ -2.18
ITM2AO43736 SNORD28B-201ENST00000390993 75 ntBASIC1.45□□□□□ -2.18
ITM2AO43736 RNU6-588P-201ENST00000410281 105 ntBASIC1.45□□□□□ -2.18
ITM2AO43736 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.45□□□□□ -2.18
ITM2AO43736 HSPE1P24-201ENST00000450782 238 ntBASIC1.45□□□□□ -2.18
ITM2AO43736 UBE2DNL-203ENST00000474922 222 ntBASIC1.45□□□□□ -2.18
ITM2AO43736 SNORD36C-201ENST00000516733 66 ntBASIC1.45□□□□□ -2.18
ITM2AO43736 RNU7-181P-201ENST00000517234 74 ntBASIC1.45□□□□□ -2.18
ITM2AO43736 AC074050.1-201ENST00000563247 211 ntBASIC1.45□□□□□ -2.18
ITM2AO43736 Y_RNA.778-201ENST00000620203 90 ntBASIC1.45□□□□□ -2.18
ITM2AO43736 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
ITM2AO43736 RNU6-125P-201ENST00000384505 107 ntBASIC1.44□□□□□ -2.18
ITM2AO43736 U8.17-201ENST00000391292 132 ntBASIC1.44□□□□□ -2.18
ITM2AO43736 SNORD123-201ENST00000459473 70 ntBASIC1.44□□□□□ -2.18
ITM2AO43736 RNU6-346P-201ENST00000516288 111 ntBASIC1.44□□□□□ -2.18
ITM2AO43736 SNORA18.7-201ENST00000516910 131 ntBASIC1.44□□□□□ -2.18
ITM2AO43736 MIR548AR-201ENST00000582191 57 ntBASIC1.44□□□□□ -2.18
ITM2AO43736 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.44□□□□□ -2.18
ITM2AO43736 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.44□□□□□ -2.18
ITM2AO43736 RNU6-774P-201ENST00000363238 107 ntBASIC1.43□□□□□ -2.18
ITM2AO43736 RNU4-11P-201ENST00000365287 132 ntBASIC1.43□□□□□ -2.18
ITM2AO43736 RNU6-1292P-201ENST00000383856 107 ntBASIC1.43□□□□□ -2.18
ITM2AO43736 Y_RNA.542-201ENST00000384641 111 ntBASIC1.43□□□□□ -2.18
ITM2AO43736 RNU7-197P-201ENST00000458836 62 ntBASIC1.43□□□□□ -2.18
ITM2AO43736 AC008834.1-201ENST00000511612 175 ntBASIC1.43□□□□□ -2.18
ITM2AO43736 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.43□□□□□ -2.18
ITM2AO43736 RNU6-922P-201ENST00000516753 99 ntBASIC1.43□□□□□ -2.18
ITM2AO43736 SNORA44.1-201ENST00000517031 108 ntBASIC1.43□□□□□ -2.18
ITM2AO43736 SNORA74.3-201ENST00000517108 154 ntBASIC1.43□□□□□ -2.18
ITM2AO43736 MIR3198-2-201ENST00000577868 80 ntBASIC1.43□□□□□ -2.18
ITM2AO43736 MIR3646-201ENST00000578301 84 ntBASIC1.43□□□□□ -2.18
ITM2AO43736 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.43□□□□□ -2.18
ITM2AO43736 AC134878.1-201ENST00000619901 243 ntBASIC1.43□□□□□ -2.18
ITM2AO43736 MIR6844-201ENST00000637122 62 ntBASIC1.43□□□□□ -2.18
ITM2AO43736 SNORA25.7-201ENST00000364375 127 ntBASIC1.42□□□□□ -2.18
ITM2AO43736 Y_RNA.251-201ENST00000364551 99 ntBASIC1.42□□□□□ -2.18
ITM2AO43736 SNORA75.5-201ENST00000391291 81 ntBASIC1.42□□□□□ -2.18
ITM2AO43736 SUMO1P3-201ENST00000439961 304 ntBASIC1.42□□□□□ -2.18
ITM2AO43736 AC027119.1-201ENST00000440877 241 ntBASIC1.42□□□□□ -2.18
ITM2AO43736 RNU1-98P-201ENST00000458992 160 ntBASIC1.42□□□□□ -2.18
ITM2AO43736 RNU1-41P-201ENST00000516161 162 ntBASIC1.42□□□□□ -2.18
ITM2AO43736 RNU1-48P-201ENST00000516400 162 ntBASIC1.42□□□□□ -2.18
ITM2AO43736 AC019176.1-201ENST00000518519 225 ntBASIC1.42□□□□□ -2.18
ITM2AO43736 AP000648.3-201ENST00000623539 4507 ntBASIC1.41□□□□□ -2.18
ITM2AO43736 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.41□□□□□ -2.18
ITM2AO43736 RNY1P5-201ENST00000383890 115 ntBASIC1.41□□□□□ -2.18
ITM2AO43736 Y_RNA.400-201ENST00000383963 111 ntBASIC1.41□□□□□ -2.18
ITM2AO43736 Y_RNA.497-201ENST00000384447 98 ntBASIC1.41□□□□□ -2.18
ITM2AO43736 MIR624-201ENST00000385217 97 ntBASIC1.41□□□□□ -2.18
ITM2AO43736 AL354695.1-201ENST00000427935 228 ntBASIC1.41□□□□□ -2.18
ITM2AO43736 AC087499.4-201ENST00000448505 178 ntBASIC1.41□□□□□ -2.18
ITM2AO43736 RPS26P48-201ENST00000491713 339 ntBASIC1.41□□□□□ -2.18
ITM2AO43736 AC079140.2-201ENST00000506193 142 ntBASIC1.41□□□□□ -2.18
ITM2AO43736 RNU2-13P-201ENST00000515909 113 ntBASIC1.41□□□□□ -2.18
ITM2AO43736 SNORA25.15-201ENST00000516487 89 ntBASIC1.41□□□□□ -2.18
ITM2AO43736 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.41□□□□□ -2.18
ITM2AO43736 MIR3133-201ENST00000583157 78 ntBASIC1.41□□□□□ -2.18
ITM2AO43736 AL513534.2-201ENST00000603836 250 ntBASIC1.41□□□□□ -2.18
ITM2AO43736 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.41□□□□□ -2.18
ITM2AO43736 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.41□□□□□ -2.18
ITM2AO43736 Y_RNA.215-201ENST00000364204 112 ntBASIC1.4□□□□□ -2.19
ITM2AO43736 Y_RNA.410-201ENST00000383992 113 ntBASIC1.4□□□□□ -2.19
ITM2AO43736 MIR570-201ENST00000384917 97 ntBASIC1.4□□□□□ -2.19
ITM2AO43736 MIR569-201ENST00000385228 96 ntBASIC1.4□□□□□ -2.19
ITM2AO43736 RNU1-78P-201ENST00000391248 165 ntBASIC1.4□□□□□ -2.19
ITM2AO43736 RNA5SP127-201ENST00000411051 133 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 214 ms