Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 Y_RNA.158-201ENST00000363651 101 ntBASIC0.63□□□□□ -2.31
MSH4O15457 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.63□□□□□ -2.31
MSH4O15457 AC067940.1-201ENST00000458411 300 ntBASIC0.63□□□□□ -2.31
MSH4O15457 Y_RNA.637-201ENST00000459424 114 ntBASIC0.63□□□□□ -2.31
MSH4O15457 AC113410.1-201ENST00000505029 247 ntBASIC0.63□□□□□ -2.31
MSH4O15457 Y_RNA.701-201ENST00000516812 110 ntBASIC0.63□□□□□ -2.31
MSH4O15457 AC113195.1-201ENST00000579952 141 ntBASIC0.63□□□□□ -2.31
MSH4O15457 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.63□□□□□ -2.31
MSH4O15457 AC087685.1-201ENST00000587507 141 ntBASIC0.63□□□□□ -2.31
MSH4O15457 7SK.10-201ENST00000621414 298 ntBASIC0.63□□□□□ -2.31
MSH4O15457 SNORD114-26-201ENST00000363543 72 ntBASIC0.62□□□□□ -2.31
MSH4O15457 Y_RNA.153-201ENST00000363615 91 ntBASIC0.62□□□□□ -2.31
MSH4O15457 RNU6-268P-201ENST00000364174 107 ntBASIC0.62□□□□□ -2.31
MSH4O15457 RNU4-10P-201ENST00000364383 140 ntBASIC0.62□□□□□ -2.31
MSH4O15457 RNU6-442P-201ENST00000383968 104 ntBASIC0.62□□□□□ -2.31
MSH4O15457 RNU6-110P-201ENST00000384508 104 ntBASIC0.62□□□□□ -2.31
MSH4O15457 Y_RNA.581-201ENST00000391017 97 ntBASIC0.62□□□□□ -2.31
MSH4O15457 MIR936-201ENST00000401264 98 ntBASIC0.62□□□□□ -2.31
MSH4O15457 AL603910.2-201ENST00000407268 136 ntBASIC0.62□□□□□ -2.31
MSH4O15457 RNU6-994P-201ENST00000410507 111 ntBASIC0.62□□□□□ -2.31
MSH4O15457 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.62□□□□□ -2.31
MSH4O15457 SCARNA24.2-201ENST00000516968 130 ntBASIC0.62□□□□□ -2.31
MSH4O15457 RNU7-181P-201ENST00000517234 74 ntBASIC0.62□□□□□ -2.31
MSH4O15457 AC036111.3-201ENST00000526389 112 ntBASIC0.62□□□□□ -2.31
MSH4O15457 AC004817.2-201ENST00000561794 651 ntBASIC0.62□□□□□ -2.31
MSH4O15457 AC025627.3-201ENST00000582078 182 ntBASIC0.62□□□□□ -2.31
MSH4O15457 AL356055.1-201ENST00000602528 446 ntBASIC0.62□□□□□ -2.31
MSH4O15457 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.62□□□□□ -2.31
MSH4O15457 RNA5SP347-201ENST00000362445 119 ntBASIC0.61□□□□□ -2.31
MSH4O15457 Y_RNA.136-201ENST00000363444 102 ntBASIC0.61□□□□□ -2.31
MSH4O15457 RNU6-1205P-201ENST00000363625 106 ntBASIC0.61□□□□□ -2.31
MSH4O15457 RNU6-674P-201ENST00000363831 107 ntBASIC0.61□□□□□ -2.31
MSH4O15457 RNU6-899P-201ENST00000363947 107 ntBASIC0.61□□□□□ -2.31
MSH4O15457 RNU6-290P-201ENST00000365212 101 ntBASIC0.61□□□□□ -2.31
MSH4O15457 MIR7-2-201ENST00000384970 110 ntBASIC0.61□□□□□ -2.31
MSH4O15457 MIR216A-201ENST00000385063 110 ntBASIC0.61□□□□□ -2.31
MSH4O15457 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
MSH4O15457 RNU6-1248P-201ENST00000391096 64 ntBASIC0.61□□□□□ -2.31
MSH4O15457 BTF3P11-201ENST00000426582 477 ntBASIC0.61□□□□□ -2.31
MSH4O15457 AC098934.3-201ENST00000430450 190 ntBASIC0.61□□□□□ -2.31
MSH4O15457 SNRPGP14-201ENST00000435400 219 ntBASIC0.61□□□□□ -2.31
MSH4O15457 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.61□□□□□ -2.31
MSH4O15457 SNORD11-201ENST00000459124 84 ntBASIC0.61□□□□□ -2.31
MSH4O15457 RNU2-31P-201ENST00000516954 155 ntBASIC0.61□□□□□ -2.31
MSH4O15457 RNU6-570P-201ENST00000517051 105 ntBASIC0.61□□□□□ -2.31
MSH4O15457 AP003733.2-201ENST00000529409 171 ntBASIC0.61□□□□□ -2.31
MSH4O15457 AC008507.4-201ENST00000585464 127 ntBASIC0.61□□□□□ -2.31
MSH4O15457 AC012433.1-201ENST00000588916 398 ntBASIC0.61□□□□□ -2.31
MSH4O15457 AL049861.1-201ENST00000603130 150 ntBASIC0.61□□□□□ -2.31
MSH4O15457 AC015726.2-201ENST00000620112 122 ntBASIC0.61□□□□□ -2.31
MSH4O15457 Y_RNA.36-201ENST00000362602 112 ntBASIC0.6□□□□□ -2.31
MSH4O15457 RNU6-654P-201ENST00000364373 107 ntBASIC0.6□□□□□ -2.31
MSH4O15457 Y_RNA.293-201ENST00000364908 93 ntBASIC0.6□□□□□ -2.31
MSH4O15457 Y_RNA.380-201ENST00000365663 111 ntBASIC0.6□□□□□ -2.31
MSH4O15457 Y_RNA.512-201ENST00000384518 102 ntBASIC0.6□□□□□ -2.31
MSH4O15457 SNORD111-201ENST00000408139 94 ntBASIC0.6□□□□□ -2.31
MSH4O15457 SNORD99-201ENST00000408612 74 ntBASIC0.6□□□□□ -2.31
MSH4O15457 MIR1302-7-201ENST00000408841 72 ntBASIC0.6□□□□□ -2.31
MSH4O15457 AC092628.1-201ENST00000436250 252 ntBASIC0.6□□□□□ -2.31
MSH4O15457 AL392103.1-201ENST00000447000 198 ntBASIC0.6□□□□□ -2.31
MSH4O15457 COX6CP6-201ENST00000490840 228 ntBASIC0.6□□□□□ -2.31
MSH4O15457 AC091959.1-201ENST00000495857 238 ntBASIC0.6□□□□□ -2.31
MSH4O15457 RNU6-1110P-201ENST00000516462 101 ntBASIC0.6□□□□□ -2.31
MSH4O15457 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.6□□□□□ -2.31
MSH4O15457 MIR2681-201ENST00000581814 105 ntBASIC0.6□□□□□ -2.31
MSH4O15457 RN7SL793P-201ENST00000583259 296 ntBASIC0.6□□□□□ -2.31
MSH4O15457 Pinc.1-201ENST00000616452 154 ntBASIC0.6□□□□□ -2.31
MSH4O15457 AC013791.1-201ENST00000616619 62 ntBASIC0.6□□□□□ -2.31
MSH4O15457 MIR6516-201ENST00000630554 81 ntBASIC0.6□□□□□ -2.31
MSH4O15457 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.59□□□□□ -2.31
MSH4O15457 SNORA25.1-201ENST00000362326 128 ntBASIC0.59□□□□□ -2.31
MSH4O15457 Y_RNA.84-201ENST00000363011 104 ntBASIC0.59□□□□□ -2.31
MSH4O15457 Y_RNA.202-201ENST00000364083 110 ntBASIC0.59□□□□□ -2.31
MSH4O15457 SNORD113.3-201ENST00000364630 78 ntBASIC0.59□□□□□ -2.31
MSH4O15457 Y_RNA.572-201ENST00000384757 98 ntBASIC0.59□□□□□ -2.31
MSH4O15457 U8.17-201ENST00000391292 132 ntBASIC0.59□□□□□ -2.31
MSH4O15457 RNA5SP95-201ENST00000410319 137 ntBASIC0.59□□□□□ -2.31
MSH4O15457 AC113618.1-201ENST00000416747 285 ntBASIC0.59□□□□□ -2.31
MSH4O15457 AC005534.2-201ENST00000431047 433 ntBASIC0.59□□□□□ -2.31
MSH4O15457 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.59□□□□□ -2.31
MSH4O15457 MIR5692C2-201ENST00000577959 77 ntBASIC0.59□□□□□ -2.31
MSH4O15457 AL355297.3-201ENST00000604082 446 ntBASIC0.59□□□□□ -2.31
MSH4O15457 AL136317.1-201ENST00000612653 226 ntBASIC0.59□□□□□ -2.31
MSH4O15457 snoU18.1-201ENST00000629629 71 ntBASIC0.59□□□□□ -2.31
MSH4O15457 RNU6-1272P-201ENST00000362776 107 ntBASIC0.58□□□□□ -2.32
MSH4O15457 SNORA33.2-201ENST00000365413 134 ntBASIC0.58□□□□□ -2.32
MSH4O15457 RNU6-514P-201ENST00000384208 107 ntBASIC0.58□□□□□ -2.32
MSH4O15457 SNORA2B-201ENST00000384583 137 ntBASIC0.58□□□□□ -2.32
MSH4O15457 SNORA53-201ENST00000391141 249 ntBASIC0.58□□□□□ -2.32
MSH4O15457 RNA5SP193-201ENST00000410353 107 ntBASIC0.58□□□□□ -2.32
MSH4O15457 MTCYBP6-201ENST00000441810 138 ntBASIC0.58□□□□□ -2.32
MSH4O15457 RNU6-830P-201ENST00000516353 107 ntBASIC0.58□□□□□ -2.32
MSH4O15457 AL008718.3-201ENST00000610217 321 ntBASIC0.58□□□□□ -2.32
MSH4O15457 MIR6779-201ENST00000617283 64 ntBASIC0.58□□□□□ -2.32
MSH4O15457 Y_RNA.14-201ENST00000362415 103 ntBASIC0.57□□□□□ -2.32
MSH4O15457 Y_RNA.117-201ENST00000363294 101 ntBASIC0.57□□□□□ -2.32
MSH4O15457 RNU6-326P-201ENST00000365480 107 ntBASIC0.57□□□□□ -2.32
MSH4O15457 Y_RNA.370-201ENST00000365589 108 ntBASIC0.57□□□□□ -2.32
MSH4O15457 RNY1P4-201ENST00000384595 115 ntBASIC0.57□□□□□ -2.32
MSH4O15457 RNU6-1067P-201ENST00000384752 107 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 356.4 ms