Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RNU6-938P-201ENST00000411285 103 ntBASIC-1.72□□□□□ -2.68
CHKB-CPT1BH3BT56 snoU13.13-201ENST00000458842 104 ntBASIC-1.72□□□□□ -2.68
CHKB-CPT1BH3BT56 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.72□□□□□ -2.68
CHKB-CPT1BH3BT56 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.72□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU7-116P-201ENST00000516940 62 ntBASIC-1.72□□□□□ -2.68
CHKB-CPT1BH3BT56 AP002963.1-201ENST00000530590 184 ntBASIC-1.72□□□□□ -2.68
CHKB-CPT1BH3BT56 MIR5696-201ENST00000578474 85 ntBASIC-1.72□□□□□ -2.68
CHKB-CPT1BH3BT56 MIR3682-201ENST00000581338 84 ntBASIC-1.72□□□□□ -2.68
CHKB-CPT1BH3BT56 AC022441.3-201ENST00000605737 136 ntBASIC-1.72□□□□□ -2.68
CHKB-CPT1BH3BT56 AC069503.3-201ENST00000618674 145 ntBASIC-1.72□□□□□ -2.68
CHKB-CPT1BH3BT56 MIR6717-201ENST00000622747 73 ntBASIC-1.72□□□□□ -2.68
CHKB-CPT1BH3BT56 RNY4P34-201ENST00000364779 95 ntBASIC-1.73□□□□□ -2.69
CHKB-CPT1BH3BT56 Y_RNA.405-201ENST00000383979 100 ntBASIC-1.73□□□□□ -2.69
CHKB-CPT1BH3BT56 RNU6-1200P-201ENST00000384162 107 ntBASIC-1.73□□□□□ -2.69
CHKB-CPT1BH3BT56 Y_RNA.451-201ENST00000384200 100 ntBASIC-1.73□□□□□ -2.69
CHKB-CPT1BH3BT56 Y_RNA.524-201ENST00000384564 100 ntBASIC-1.73□□□□□ -2.69
CHKB-CPT1BH3BT56 Y_RNA.561-201ENST00000384694 100 ntBASIC-1.73□□□□□ -2.69
CHKB-CPT1BH3BT56 MIR147A-201ENST00000385079 72 ntBASIC-1.73□□□□□ -2.69
CHKB-CPT1BH3BT56 RNU6-195P-201ENST00000411352 109 ntBASIC-1.73□□□□□ -2.69
CHKB-CPT1BH3BT56 AC009961.2-201ENST00000435771 251 ntBASIC-1.73□□□□□ -2.69
CHKB-CPT1BH3BT56 AP000533.3-201ENST00000447704 118 ntBASIC-1.73□□□□□ -2.69
CHKB-CPT1BH3BT56 AC087588.2-201ENST00000617667 426 ntBASIC-1.73□□□□□ -2.69
CHKB-CPT1BH3BT56 RNY1P16-201ENST00000363063 111 ntBASIC-1.74□□□□□ -2.69
CHKB-CPT1BH3BT56 RNU6-82P-201ENST00000363970 107 ntBASIC-1.74□□□□□ -2.69
CHKB-CPT1BH3BT56 RNU6-790P-201ENST00000384479 105 ntBASIC-1.74□□□□□ -2.69
CHKB-CPT1BH3BT56 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.74□□□□□ -2.69
CHKB-CPT1BH3BT56 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.74□□□□□ -2.69
CHKB-CPT1BH3BT56 MTND1P11-201ENST00000456661 876 ntBASIC-1.74□□□□□ -2.69
CHKB-CPT1BH3BT56 RNU7-74P-201ENST00000459104 62 ntBASIC-1.74□□□□□ -2.69
CHKB-CPT1BH3BT56 AC040926.1-201ENST00000530195 238 ntBASIC-1.74□□□□□ -2.69
CHKB-CPT1BH3BT56 AC091931.1-201ENST00000623488 728 ntBASIC-1.74□□□□□ -2.69
CHKB-CPT1BH3BT56 AC009161.2-201ENST00000624626 138 ntBASIC-1.74□□□□□ -2.69
CHKB-CPT1BH3BT56 MIR626-201ENST00000385032 94 ntBASIC-1.75□□□□□ -2.69
CHKB-CPT1BH3BT56 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.75□□□□□ -2.69
CHKB-CPT1BH3BT56 USMG5P1-201ENST00000425964 177 ntBASIC-1.75□□□□□ -2.69
CHKB-CPT1BH3BT56 FCF1P4-201ENST00000448326 183 ntBASIC-1.75□□□□□ -2.69
CHKB-CPT1BH3BT56 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-1.75□□□□□ -2.69
CHKB-CPT1BH3BT56 TPTE2P5-203ENST00000458118 728 ntBASIC-1.75□□□□□ -2.69
CHKB-CPT1BH3BT56 RNU7-187P-201ENST00000458985 68 ntBASIC-1.75□□□□□ -2.69
CHKB-CPT1BH3BT56 SNORA40.9-201ENST00000515895 93 ntBASIC-1.75□□□□□ -2.69
CHKB-CPT1BH3BT56 MIR3920-201ENST00000581751 86 ntBASIC-1.75□□□□□ -2.69
CHKB-CPT1BH3BT56 MIR548AE1-201ENST00000583292 70 ntBASIC-1.75□□□□□ -2.69
CHKB-CPT1BH3BT56 AC245884.10-201ENST00000597355 337 ntBASIC-1.75□□□□□ -2.69
CHKB-CPT1BH3BT56 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-1.75□□□□□ -2.69
CHKB-CPT1BH3BT56 SNORD115-28-201ENST00000363931 81 ntBASIC-1.76□□□□□ -2.69
CHKB-CPT1BH3BT56 RNU6-154P-201ENST00000384306 106 ntBASIC-1.76□□□□□ -2.69
CHKB-CPT1BH3BT56 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.76□□□□□ -2.69
CHKB-CPT1BH3BT56 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.76□□□□□ -2.69
CHKB-CPT1BH3BT56 RNU7-96P-201ENST00000459535 64 ntBASIC-1.76□□□□□ -2.69
CHKB-CPT1BH3BT56 SNORA19.2-201ENST00000516013 114 ntBASIC-1.76□□□□□ -2.69
CHKB-CPT1BH3BT56 AC092747.3-201ENST00000603769 301 ntBASIC-1.76□□□□□ -2.69
CHKB-CPT1BH3BT56 AC087752.4-201ENST00000605911 462 ntBASIC-1.76□□□□□ -2.69
CHKB-CPT1BH3BT56 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.77□□□□□ -2.69
CHKB-CPT1BH3BT56 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.77□□□□□ -2.69
CHKB-CPT1BH3BT56 RNU2-9P-201ENST00000410194 145 ntBASIC-1.77□□□□□ -2.69
CHKB-CPT1BH3BT56 MTND3P21-201ENST00000433774 331 ntBASIC-1.77□□□□□ -2.69
CHKB-CPT1BH3BT56 RNU6-998P-201ENST00000515894 101 ntBASIC-1.77□□□□□ -2.69
CHKB-CPT1BH3BT56 RNA5SP67-201ENST00000516422 131 ntBASIC-1.77□□□□□ -2.69
CHKB-CPT1BH3BT56 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.77□□□□□ -2.69
CHKB-CPT1BH3BT56 YWHAEP2-201ENST00000580066 112 ntBASIC-1.77□□□□□ -2.69
CHKB-CPT1BH3BT56 MIR2681-201ENST00000581814 105 ntBASIC-1.77□□□□□ -2.69
CHKB-CPT1BH3BT56 AP003357.1-201ENST00000604497 148 ntBASIC-1.77□□□□□ -2.69
CHKB-CPT1BH3BT56 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.77□□□□□ -2.69
CHKB-CPT1BH3BT56 AC011603.4-201ENST00000611325 277 ntBASIC-1.77□□□□□ -2.69
CHKB-CPT1BH3BT56 Y_RNA.106-201ENST00000363189 100 ntBASIC-1.78□□□□□ -2.69
CHKB-CPT1BH3BT56 SNORD74.6-201ENST00000364796 70 ntBASIC-1.78□□□□□ -2.69
CHKB-CPT1BH3BT56 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.78□□□□□ -2.69
CHKB-CPT1BH3BT56 RNU6-282P-201ENST00000365357 103 ntBASIC-1.78□□□□□ -2.69
CHKB-CPT1BH3BT56 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.78□□□□□ -2.69
CHKB-CPT1BH3BT56 RNU6-1242P-201ENST00000391052 103 ntBASIC-1.78□□□□□ -2.69
CHKB-CPT1BH3BT56 MTCYBP8-201ENST00000422855 651 ntBASIC-1.78□□□□□ -2.69
CHKB-CPT1BH3BT56 SNORD11-201ENST00000459124 84 ntBASIC-1.78□□□□□ -2.69
CHKB-CPT1BH3BT56 snoU13.19-201ENST00000459148 104 ntBASIC-1.78□□□□□ -2.69
CHKB-CPT1BH3BT56 AC026421.1-201ENST00000519101 163 ntBASIC-1.78□□□□□ -2.69
CHKB-CPT1BH3BT56 MIR4999-201ENST00000585029 91 ntBASIC-1.78□□□□□ -2.69
CHKB-CPT1BH3BT56 RNU4-28P-201ENST00000364739 141 ntBASIC-1.79□□□□□ -2.7
CHKB-CPT1BH3BT56 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.79□□□□□ -2.7
CHKB-CPT1BH3BT56 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.79□□□□□ -2.7
CHKB-CPT1BH3BT56 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.79□□□□□ -2.7
CHKB-CPT1BH3BT56 AC073415.1-201ENST00000449240 153 ntBASIC-1.79□□□□□ -2.7
CHKB-CPT1BH3BT56 PCMTD1P1-201ENST00000455560 355 ntBASIC-1.79□□□□□ -2.7
CHKB-CPT1BH3BT56 SNORA40.17-201ENST00000517256 115 ntBASIC-1.79□□□□□ -2.7
CHKB-CPT1BH3BT56 AC127455.1-201ENST00000565496 145 ntBASIC-1.79□□□□□ -2.7
CHKB-CPT1BH3BT56 AC138207.3-201ENST00000585289 166 ntBASIC-1.79□□□□□ -2.7
CHKB-CPT1BH3BT56 AC004223.4-201ENST00000612426 332 ntBASIC-1.79□□□□□ -2.7
CHKB-CPT1BH3BT56 MIR20A-201ENST00000362279 71 ntBASIC-1.8□□□□□ -2.7
CHKB-CPT1BH3BT56 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.8□□□□□ -2.7
CHKB-CPT1BH3BT56 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.8□□□□□ -2.7
CHKB-CPT1BH3BT56 RNU4-32P-201ENST00000363404 141 ntBASIC-1.8□□□□□ -2.7
CHKB-CPT1BH3BT56 RNY1P13-201ENST00000365030 105 ntBASIC-1.8□□□□□ -2.7
CHKB-CPT1BH3BT56 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.8□□□□□ -2.7
CHKB-CPT1BH3BT56 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.8□□□□□ -2.7
CHKB-CPT1BH3BT56 RNU6-449P-201ENST00000383914 107 ntBASIC-1.8□□□□□ -2.7
CHKB-CPT1BH3BT56 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.8□□□□□ -2.7
CHKB-CPT1BH3BT56 Y_RNA.466-201ENST00000384294 113 ntBASIC-1.8□□□□□ -2.7
CHKB-CPT1BH3BT56 RNU6-83P-201ENST00000384568 112 ntBASIC-1.8□□□□□ -2.7
CHKB-CPT1BH3BT56 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.8□□□□□ -2.7
CHKB-CPT1BH3BT56 Y_RNA.706-201ENST00000516933 99 ntBASIC-1.8□□□□□ -2.7
CHKB-CPT1BH3BT56 MIR548H5-201ENST00000580314 60 ntBASIC-1.8□□□□□ -2.7
CHKB-CPT1BH3BT56 AC145423.2-201ENST00000610631 239 ntBASIC-1.8□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 254 ms