Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RNU6-1031P-201ENST00000384773 107 ntBASIC2.33□□□□□ -2.04
PPARGC1AQ9UBK2 RNU2-7P-201ENST00000410794 178 ntBASIC2.33□□□□□ -2.04
PPARGC1AQ9UBK2 RNA5SP450-201ENST00000411206 102 ntBASIC2.33□□□□□ -2.04
PPARGC1AQ9UBK2 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.33□□□□□ -2.04
PPARGC1AQ9UBK2 HSPE1P9-201ENST00000440046 311 ntBASIC2.33□□□□□ -2.04
PPARGC1AQ9UBK2 AC087499.4-201ENST00000448505 178 ntBASIC2.33□□□□□ -2.04
PPARGC1AQ9UBK2 RPS27P21-201ENST00000486977 252 ntBASIC2.33□□□□□ -2.04
PPARGC1AQ9UBK2 Y_RNA.686-201ENST00000516548 134 ntBASIC2.33□□□□□ -2.04
PPARGC1AQ9UBK2 RNU6-1234P-201ENST00000516877 103 ntBASIC2.33□□□□□ -2.04
PPARGC1AQ9UBK2 SNORD53-201ENST00000579969 78 ntBASIC2.33□□□□□ -2.04
PPARGC1AQ9UBK2 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.33□□□□□ -2.04
PPARGC1AQ9UBK2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
PPARGC1AQ9UBK2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
PPARGC1AQ9UBK2 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PPARGC1AQ9UBK2 SNORD115-28-201ENST00000363931 81 ntBASIC2.32□□□□□ -2.04
PPARGC1AQ9UBK2 SNORD38C-201ENST00000384381 69 ntBASIC2.32□□□□□ -2.04
PPARGC1AQ9UBK2 AL356320.1-201ENST00000429616 163 ntBASIC2.32□□□□□ -2.04
PPARGC1AQ9UBK2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.32□□□□□ -2.04
PPARGC1AQ9UBK2 AC114811.1-201ENST00000507207 168 ntBASIC2.32□□□□□ -2.04
PPARGC1AQ9UBK2 RNU6-830P-201ENST00000516353 107 ntBASIC2.32□□□□□ -2.04
PPARGC1AQ9UBK2 RNU6-113P-201ENST00000516653 101 ntBASIC2.32□□□□□ -2.04
PPARGC1AQ9UBK2 Y_RNA.712-201ENST00000517011 92 ntBASIC2.32□□□□□ -2.04
PPARGC1AQ9UBK2 AL359881.1-201ENST00000602916 267 ntBASIC2.32□□□□□ -2.04
PPARGC1AQ9UBK2 AC009831.4-201ENST00000620744 325 ntBASIC2.32□□□□□ -2.04
PPARGC1AQ9UBK2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.32□□□□□ -2.04
PPARGC1AQ9UBK2 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PPARGC1AQ9UBK2 RNA5SP276-201ENST00000362580 94 ntBASIC2.31□□□□□ -2.04
PPARGC1AQ9UBK2 RNU6-1290P-201ENST00000362957 109 ntBASIC2.31□□□□□ -2.04
PPARGC1AQ9UBK2 RNU6-647P-201ENST00000364243 107 ntBASIC2.31□□□□□ -2.04
PPARGC1AQ9UBK2 Y_RNA.547-201ENST00000384654 119 ntBASIC2.31□□□□□ -2.04
PPARGC1AQ9UBK2 RNU6-735P-201ENST00000410612 107 ntBASIC2.31□□□□□ -2.04
PPARGC1AQ9UBK2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.31□□□□□ -2.04
PPARGC1AQ9UBK2 AL158147.1-201ENST00000443970 75 ntBASIC2.31□□□□□ -2.04
PPARGC1AQ9UBK2 RPL23AP63-201ENST00000498752 471 ntBASIC2.31□□□□□ -2.04
PPARGC1AQ9UBK2 RNA5SP236-201ENST00000516169 116 ntBASIC2.31□□□□□ -2.04
PPARGC1AQ9UBK2 RNA5SP200-201ENST00000516360 103 ntBASIC2.31□□□□□ -2.04
PPARGC1AQ9UBK2 RNU7-25P-201ENST00000516544 62 ntBASIC2.31□□□□□ -2.04
PPARGC1AQ9UBK2 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.31□□□□□ -2.04
PPARGC1AQ9UBK2 AL513423.1-201ENST00000621695 132 ntBASIC2.31□□□□□ -2.04
PPARGC1AQ9UBK2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.31□□□□□ -2.04
PPARGC1AQ9UBK2 Y_RNA.37-201ENST00000362606 108 ntBASIC2.3□□□□□ -2.04
PPARGC1AQ9UBK2 Y_RNA.261-201ENST00000364631 102 ntBASIC2.3□□□□□ -2.04
PPARGC1AQ9UBK2 RNU6-1189P-201ENST00000383958 107 ntBASIC2.3□□□□□ -2.04
PPARGC1AQ9UBK2 MIR221-201ENST00000385135 110 ntBASIC2.3□□□□□ -2.04
PPARGC1AQ9UBK2 RNA5SP508-201ENST00000411327 119 ntBASIC2.3□□□□□ -2.04
PPARGC1AQ9UBK2 RPL23AP6-201ENST00000446637 472 ntBASIC2.3□□□□□ -2.04
PPARGC1AQ9UBK2 snoU13.27-201ENST00000459278 104 ntBASIC2.3□□□□□ -2.04
PPARGC1AQ9UBK2 SCARNA16.3-201ENST00000516595 184 ntBASIC2.3□□□□□ -2.04
PPARGC1AQ9UBK2 MIR514B-201ENST00000516774 80 ntBASIC2.3□□□□□ -2.04
PPARGC1AQ9UBK2 RNA5SP437-201ENST00000517249 129 ntBASIC2.3□□□□□ -2.04
PPARGC1AQ9UBK2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.3□□□□□ -2.04
PPARGC1AQ9UBK2 MIR4709-201ENST00000577272 72 ntBASIC2.3□□□□□ -2.04
PPARGC1AQ9UBK2 AC064859.1-201ENST00000624741 174 ntBASIC2.3□□□□□ -2.04
PPARGC1AQ9UBK2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.3□□□□□ -2.04
PPARGC1AQ9UBK2 MTND5P32-201ENST00000560711 1802 ntBASIC2.3□□□□□ -2.04
PPARGC1AQ9UBK2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.29□□□□□ -2.04
PPARGC1AQ9UBK2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PPARGC1AQ9UBK2 Y_RNA.114-201ENST00000363265 113 ntBASIC2.29□□□□□ -2.04
PPARGC1AQ9UBK2 SNORA4.2-201ENST00000365313 147 ntBASIC2.29□□□□□ -2.04
PPARGC1AQ9UBK2 SNORA48.3-201ENST00000391081 134 ntBASIC2.29□□□□□ -2.04
PPARGC1AQ9UBK2 AL445646.1-201ENST00000431784 216 ntBASIC2.29□□□□□ -2.04
PPARGC1AQ9UBK2 RNA5SP233-201ENST00000459153 113 ntBASIC2.29□□□□□ -2.04
PPARGC1AQ9UBK2 AC008413.1-201ENST00000511864 177 ntBASIC2.29□□□□□ -2.04
PPARGC1AQ9UBK2 RNA5SP168-201ENST00000516642 112 ntBASIC2.29□□□□□ -2.04
PPARGC1AQ9UBK2 SCARNA15-202ENST00000516881 127 ntBASIC2.29□□□□□ -2.04
PPARGC1AQ9UBK2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.29□□□□□ -2.04
PPARGC1AQ9UBK2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
PPARGC1AQ9UBK2 U8.16-201ENST00000391279 133 ntBASIC2.28□□□□□ -2.04
PPARGC1AQ9UBK2 RNA5SP100-201ENST00000410903 110 ntBASIC2.28□□□□□ -2.04
PPARGC1AQ9UBK2 RNA5SP59-201ENST00000410922 110 ntBASIC2.28□□□□□ -2.04
PPARGC1AQ9UBK2 CALM2P4-201ENST00000430810 426 ntBASIC2.28□□□□□ -2.04
PPARGC1AQ9UBK2 AC104435.1-201ENST00000483483 166 ntBASIC2.28□□□□□ -2.04
PPARGC1AQ9UBK2 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.28□□□□□ -2.04
PPARGC1AQ9UBK2 AL022345.2-201ENST00000606307 135 ntBASIC2.28□□□□□ -2.04
PPARGC1AQ9UBK2 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.28□□□□□ -2.04
PPARGC1AQ9UBK2 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.28□□□□□ -2.04
PPARGC1AQ9UBK2 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
PPARGC1AQ9UBK2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PPARGC1AQ9UBK2 RNU6-301P-201ENST00000384277 107 ntBASIC2.27□□□□□ -2.05
PPARGC1AQ9UBK2 MIR452-201ENST00000385020 85 ntBASIC2.27□□□□□ -2.05
PPARGC1AQ9UBK2 RNU6-360P-201ENST00000390944 104 ntBASIC2.27□□□□□ -2.05
PPARGC1AQ9UBK2 SNORA3.2-201ENST00000408221 125 ntBASIC2.27□□□□□ -2.05
PPARGC1AQ9UBK2 RNA5SP425-201ENST00000410336 112 ntBASIC2.27□□□□□ -2.05
PPARGC1AQ9UBK2 Z98742.3-201ENST00000418637 326 ntBASIC2.27□□□□□ -2.05
PPARGC1AQ9UBK2 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.27□□□□□ -2.05
PPARGC1AQ9UBK2 RNU6-1149P-201ENST00000516810 97 ntBASIC2.27□□□□□ -2.05
PPARGC1AQ9UBK2 MIR1273D-201ENST00000577266 86 ntBASIC2.27□□□□□ -2.05
PPARGC1AQ9UBK2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.27□□□□□ -2.05
PPARGC1AQ9UBK2 AC015726.2-201ENST00000620112 122 ntBASIC2.27□□□□□ -2.05
PPARGC1AQ9UBK2 MIR6132-201ENST00000622083 109 ntBASIC2.27□□□□□ -2.05
PPARGC1AQ9UBK2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PPARGC1AQ9UBK2 RNU6-309P-201ENST00000364573 106 ntBASIC2.26□□□□□ -2.05
PPARGC1AQ9UBK2 Y_RNA.294-201ENST00000364916 102 ntBASIC2.26□□□□□ -2.05
PPARGC1AQ9UBK2 AL627390.1-201ENST00000396055 340 ntBASIC2.26□□□□□ -2.05
PPARGC1AQ9UBK2 Y_RNA.617-201ENST00000410920 90 ntBASIC2.26□□□□□ -2.05
PPARGC1AQ9UBK2 MTATP6P29-201ENST00000415057 132 ntBASIC2.26□□□□□ -2.05
PPARGC1AQ9UBK2 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.26□□□□□ -2.05
PPARGC1AQ9UBK2 AC015922.2-201ENST00000435593 184 ntBASIC2.26□□□□□ -2.05
PPARGC1AQ9UBK2 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.26□□□□□ -2.05
PPARGC1AQ9UBK2 RNU7-34P-201ENST00000459394 64 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 238.9 ms