Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 MIR548AY-201ENST00000617669 107 ntBASIC0.12□□□□□ -2.39
TREX1Q9NSU2 Y_RNA.331-201ENST00000365267 102 ntBASIC0.11□□□□□ -2.39
TREX1Q9NSU2 Y_RNA.433-201ENST00000384089 102 ntBASIC0.11□□□□□ -2.39
TREX1Q9NSU2 MIR938-201ENST00000401216 83 ntBASIC0.11□□□□□ -2.39
TREX1Q9NSU2 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.11□□□□□ -2.39
TREX1Q9NSU2 AC107297.1-201ENST00000459991 176 ntBASIC0.11□□□□□ -2.39
TREX1Q9NSU2 AC069439.1-201ENST00000494739 167 ntBASIC0.11□□□□□ -2.39
TREX1Q9NSU2 AC091951.2-201ENST00000500762 203 ntBASIC0.11□□□□□ -2.39
TREX1Q9NSU2 AL080274.1-201ENST00000605565 220 ntBASIC0.11□□□□□ -2.39
TREX1Q9NSU2 AC098679.4-201ENST00000624241 654 ntBASIC0.11□□□□□ -2.39
TREX1Q9NSU2 U6.92-201ENST00000636464 89 ntBASIC0.11□□□□□ -2.39
TREX1Q9NSU2 RNU6-890P-201ENST00000384121 107 ntBASIC0.1□□□□□ -2.39
TREX1Q9NSU2 RNU6-364P-201ENST00000384387 107 ntBASIC0.1□□□□□ -2.39
TREX1Q9NSU2 AC090844.1-201ENST00000422019 156 ntBASIC0.1□□□□□ -2.39
TREX1Q9NSU2 RNU7-67P-201ENST00000459003 62 ntBASIC0.1□□□□□ -2.39
TREX1Q9NSU2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.1□□□□□ -2.39
TREX1Q9NSU2 MIR2909-201ENST00000617113 69 ntBASIC0.1□□□□□ -2.39
TREX1Q9NSU2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.1□□□□□ -2.39
TREX1Q9NSU2 Y_RNA.27-201ENST00000362540 103 ntBASIC0.09□□□□□ -2.4
TREX1Q9NSU2 RNU6-1188P-201ENST00000363795 107 ntBASIC0.09□□□□□ -2.4
TREX1Q9NSU2 Y_RNA.570-201ENST00000384750 101 ntBASIC0.09□□□□□ -2.4
TREX1Q9NSU2 AF228730.4-201ENST00000421457 183 ntBASIC0.09□□□□□ -2.4
TREX1Q9NSU2 AC236972.2-201ENST00000434979 310 ntBASIC0.09□□□□□ -2.4
TREX1Q9NSU2 RNU6-437P-201ENST00000459408 95 ntBASIC0.09□□□□□ -2.4
TREX1Q9NSU2 SNORA25.18-201ENST00000607153 114 ntBASIC0.09□□□□□ -2.4
TREX1Q9NSU2 AC006441.5-201ENST00000612680 209 ntBASIC0.09□□□□□ -2.4
TREX1Q9NSU2 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.09□□□□□ -2.4
TREX1Q9NSU2 uc_338.16-201ENST00000621804 95 ntBASIC0.09□□□□□ -2.4
TREX1Q9NSU2 Y_RNA.242-201ENST00000364473 110 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 RNU6-1319P-201ENST00000390855 104 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 RNU6-747P-201ENST00000390928 104 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 RNU6-241P-201ENST00000391148 104 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 AL603910.2-201ENST00000407268 136 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 RNU6-447P-201ENST00000410293 104 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 RNU6-1118P-201ENST00000410382 104 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 RNU6-1076P-201ENST00000410397 104 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 RNU6-355P-201ENST00000410427 104 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 SNORA36B-201ENST00000410438 131 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 RNU6-791P-201ENST00000410467 104 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 Y_RNA.599-201ENST00000410489 109 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 RNU6-705P-201ENST00000410601 104 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 RNU6-1100P-201ENST00000410691 104 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 RNU6-860P-201ENST00000410860 104 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 RNU6-1217P-201ENST00000411276 104 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 RNU6-785P-201ENST00000411324 104 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 AC073261.1-201ENST00000429409 121 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 snoU13.16-201ENST00000459350 104 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 RNU2-13P-201ENST00000515909 113 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 SNORA18.4-201ENST00000516440 124 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 RNU6-358P-201ENST00000516564 75 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 RNA5SP94-201ENST00000516917 108 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 AC084782.3-201ENST00000612282 578 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 U6.90-201ENST00000614007 104 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 AC134878.1-201ENST00000619901 243 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 U6.70-201ENST00000620287 104 ntBASIC0.08□□□□□ -2.4
TREX1Q9NSU2 AC010332.2-201ENST00000613083 1904 ntBASIC0.07□□□□□ -2.4
TREX1Q9NSU2 Y_RNA.318-201ENST00000365131 97 ntBASIC0.07□□□□□ -2.4
TREX1Q9NSU2 RNA5SP395-201ENST00000516567 118 ntBASIC0.07□□□□□ -2.4
TREX1Q9NSU2 RNU7-110P-201ENST00000516891 62 ntBASIC0.07□□□□□ -2.4
TREX1Q9NSU2 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.07□□□□□ -2.4
TREX1Q9NSU2 MIR4431-201ENST00000579990 94 ntBASIC0.07□□□□□ -2.4
TREX1Q9NSU2 MIR3145-201ENST00000580727 82 ntBASIC0.07□□□□□ -2.4
TREX1Q9NSU2 AL355297.3-201ENST00000604082 446 ntBASIC0.07□□□□□ -2.4
TREX1Q9NSU2 AC011373.1-201ENST00000607270 237 ntBASIC0.07□□□□□ -2.4
TREX1Q9NSU2 SNORD81.1-201ENST00000363064 77 ntBASIC0.06□□□□□ -2.4
TREX1Q9NSU2 RNU6-1048P-201ENST00000364054 107 ntBASIC0.06□□□□□ -2.4
TREX1Q9NSU2 Y_RNA.241-201ENST00000364470 117 ntBASIC0.06□□□□□ -2.4
TREX1Q9NSU2 SNORA63C-201ENST00000364578 129 ntBASIC0.06□□□□□ -2.4
TREX1Q9NSU2 RNA5SP117-201ENST00000365294 118 ntBASIC0.06□□□□□ -2.4
TREX1Q9NSU2 SNORD38B-201ENST00000384690 67 ntBASIC0.06□□□□□ -2.4
TREX1Q9NSU2 MIR329-2-201ENST00000385029 84 ntBASIC0.06□□□□□ -2.4
TREX1Q9NSU2 SNORD100-201ENST00000408573 76 ntBASIC0.06□□□□□ -2.4
TREX1Q9NSU2 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.06□□□□□ -2.4
TREX1Q9NSU2 BTF3P11-201ENST00000426582 477 ntBASIC0.06□□□□□ -2.4
TREX1Q9NSU2 MTATP6P26-201ENST00000445926 662 ntBASIC0.06□□□□□ -2.4
TREX1Q9NSU2 RNU7-102P-201ENST00000458948 62 ntBASIC0.06□□□□□ -2.4
TREX1Q9NSU2 RNU6-911P-201ENST00000516523 104 ntBASIC0.06□□□□□ -2.4
TREX1Q9NSU2 RNA5SP285-201ENST00000516619 119 ntBASIC0.06□□□□□ -2.4
TREX1Q9NSU2 RNU6-958P-201ENST00000516995 106 ntBASIC0.06□□□□□ -2.4
TREX1Q9NSU2 MIR5190-201ENST00000581537 80 ntBASIC0.06□□□□□ -2.4
TREX1Q9NSU2 AC008608.1-201ENST00000603910 127 ntBASIC0.06□□□□□ -2.4
TREX1Q9NSU2 SNORD38B-202ENST00000625943 69 ntBASIC0.06□□□□□ -2.4
TREX1Q9NSU2 MIR371B-201ENST00000638082 66 ntBASIC0.06□□□□□ -2.4
TREX1Q9NSU2 AC073869.6-201ENST00000640656 341 ntBASIC0.06□□□□□ -2.4
TREX1Q9NSU2 Y_RNA.6-201ENST00000362350 114 ntBASIC0.05□□□□□ -2.4
TREX1Q9NSU2 RNU6-845P-201ENST00000362578 103 ntBASIC0.05□□□□□ -2.4
TREX1Q9NSU2 RNU6-815P-201ENST00000384080 113 ntBASIC0.05□□□□□ -2.4
TREX1Q9NSU2 AC099799.1-201ENST00000439809 192 ntBASIC0.05□□□□□ -2.4
TREX1Q9NSU2 RNU7-141P-201ENST00000459304 62 ntBASIC0.05□□□□□ -2.4
TREX1Q9NSU2 AC091959.1-201ENST00000495857 238 ntBASIC0.05□□□□□ -2.4
TREX1Q9NSU2 RNU7-25P-201ENST00000516544 62 ntBASIC0.05□□□□□ -2.4
TREX1Q9NSU2 AC006600.1-201ENST00000572529 153 ntBASIC0.05□□□□□ -2.4
TREX1Q9NSU2 AC090897.1-201ENST00000580909 226 ntBASIC0.05□□□□□ -2.4
TREX1Q9NSU2 uc_338.6-201ENST00000613544 171 ntBASIC0.05□□□□□ -2.4
TREX1Q9NSU2 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.05□□□□□ -2.4
TREX1Q9NSU2 AC138305.3-201ENST00000624988 240 ntBASIC0.05□□□□□ -2.4
TREX1Q9NSU2 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
TREX1Q9NSU2 RNU6-674P-201ENST00000363831 107 ntBASIC0.04□□□□□ -2.4
TREX1Q9NSU2 Y_RNA.547-201ENST00000384654 119 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 257.4 ms