Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
NANOGQ9H9S0 RNU6-1205P-201ENST00000363625 106 ntBASIC0.87□□□□□ -2.27
NANOGQ9H9S0 Y_RNA.191-201ENST00000363972 113 ntBASIC0.87□□□□□ -2.27
NANOGQ9H9S0 RNU6-268P-201ENST00000364174 107 ntBASIC0.87□□□□□ -2.27
NANOGQ9H9S0 snoU2-30.1-201ENST00000365012 70 ntBASIC0.87□□□□□ -2.27
NANOGQ9H9S0 Y_RNA.461-201ENST00000384263 103 ntBASIC0.87□□□□□ -2.27
NANOGQ9H9S0 AL451046.2-201ENST00000403074 277 ntBASIC0.87□□□□□ -2.27
NANOGQ9H9S0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.87□□□□□ -2.27
NANOGQ9H9S0 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.87□□□□□ -2.27
NANOGQ9H9S0 RPL39P28-201ENST00000465655 155 ntBASIC0.87□□□□□ -2.27
NANOGQ9H9S0 RNU6-1143P-201ENST00000516125 104 ntBASIC0.87□□□□□ -2.27
NANOGQ9H9S0 RNU6-327P-201ENST00000516270 127 ntBASIC0.87□□□□□ -2.27
NANOGQ9H9S0 SNORA18.7-201ENST00000516910 131 ntBASIC0.87□□□□□ -2.27
NANOGQ9H9S0 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.87□□□□□ -2.27
NANOGQ9H9S0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.87□□□□□ -2.27
NANOGQ9H9S0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.87□□□□□ -2.27
NANOGQ9H9S0 AC012433.1-201ENST00000588916 398 ntBASIC0.87□□□□□ -2.27
NANOGQ9H9S0 Y_RNA.518-201ENST00000384552 113 ntBASIC0.86□□□□□ -2.27
NANOGQ9H9S0 MIR570-201ENST00000384917 97 ntBASIC0.86□□□□□ -2.27
NANOGQ9H9S0 MIR452-201ENST00000385020 85 ntBASIC0.86□□□□□ -2.27
NANOGQ9H9S0 RNU6-1248P-201ENST00000391096 64 ntBASIC0.86□□□□□ -2.27
NANOGQ9H9S0 MIR1287-201ENST00000408492 90 ntBASIC0.86□□□□□ -2.27
NANOGQ9H9S0 MIR1276-201ENST00000408707 83 ntBASIC0.86□□□□□ -2.27
NANOGQ9H9S0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.86□□□□□ -2.27
NANOGQ9H9S0 SNORD123-201ENST00000459473 70 ntBASIC0.86□□□□□ -2.27
NANOGQ9H9S0 MTND1P19-201ENST00000511780 315 ntBASIC0.86□□□□□ -2.27
NANOGQ9H9S0 MIR548AR-201ENST00000582191 57 ntBASIC0.86□□□□□ -2.27
NANOGQ9H9S0 AL049861.1-201ENST00000603130 150 ntBASIC0.86□□□□□ -2.27
NANOGQ9H9S0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.86□□□□□ -2.27
NANOGQ9H9S0 JPX_2.1-201ENST00000614161 69 ntBASIC0.86□□□□□ -2.27
NANOGQ9H9S0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
NANOGQ9H9S0 SNORA25.3-201ENST00000363205 127 ntBASIC0.85□□□□□ -2.27
NANOGQ9H9S0 SNORD114-27-201ENST00000363766 70 ntBASIC0.85□□□□□ -2.27
NANOGQ9H9S0 Y_RNA.224-201ENST00000364308 111 ntBASIC0.85□□□□□ -2.27
NANOGQ9H9S0 Y_RNA.226-201ENST00000364337 114 ntBASIC0.85□□□□□ -2.27
NANOGQ9H9S0 Y_RNA.293-201ENST00000364908 93 ntBASIC0.85□□□□□ -2.27
NANOGQ9H9S0 RNU6-514P-201ENST00000384208 107 ntBASIC0.85□□□□□ -2.27
NANOGQ9H9S0 RNU6-910P-201ENST00000390844 107 ntBASIC0.85□□□□□ -2.27
NANOGQ9H9S0 RNU2-38P-201ENST00000410856 79 ntBASIC0.85□□□□□ -2.27
NANOGQ9H9S0 RNU6-1054P-201ENST00000411293 104 ntBASIC0.85□□□□□ -2.27
NANOGQ9H9S0 AC245047.7-201ENST00000440265 293 ntBASIC0.85□□□□□ -2.27
NANOGQ9H9S0 SCARNA8-201ENST00000515924 131 ntBASIC0.85□□□□□ -2.27
NANOGQ9H9S0 SNORD111.1-201ENST00000516421 86 ntBASIC0.85□□□□□ -2.27
NANOGQ9H9S0 SNORA74.3-201ENST00000517108 154 ntBASIC0.85□□□□□ -2.27
NANOGQ9H9S0 RNA5SP404-201ENST00000517118 132 ntBASIC0.85□□□□□ -2.27
NANOGQ9H9S0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.85□□□□□ -2.27
NANOGQ9H9S0 AL353621.2-201ENST00000605340 133 ntBASIC0.85□□□□□ -2.27
NANOGQ9H9S0 AC011921.3-201ENST00000605540 361 ntBASIC0.85□□□□□ -2.27
NANOGQ9H9S0 AL022345.2-201ENST00000606307 135 ntBASIC0.85□□□□□ -2.27
NANOGQ9H9S0 U2.14-201ENST00000615943 113 ntBASIC0.85□□□□□ -2.27
NANOGQ9H9S0 MIR8065-201ENST00000620577 100 ntBASIC0.85□□□□□ -2.27
NANOGQ9H9S0 Y_RNA.24-201ENST00000362508 103 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 Y_RNA.44-201ENST00000362676 108 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 Y_RNA.76-201ENST00000362931 109 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 SNORD14E-201ENST00000364009 85 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 RNU6-574P-201ENST00000384265 107 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 Y_RNA.494-201ENST00000384432 111 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 RNU6-713P-201ENST00000384761 107 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 MIR136-201ENST00000385207 82 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 MT-TT-201ENST00000387460 66 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 SNORA75.2-201ENST00000391138 150 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 SNORA75.3-201ENST00000391231 150 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 AL078595.1-201ENST00000404458 226 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 MIR1302-7-201ENST00000408841 72 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 SNORD2.1-201ENST00000458762 69 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 MTCO2P24-201ENST00000515611 426 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 RNU6-322P-201ENST00000516010 103 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 SNORD116-28-201ENST00000516123 91 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 RN7SKP164-201ENST00000516138 266 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 Y_RNA.680-201ENST00000516441 93 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 RNU6-113P-201ENST00000516653 101 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 RNU7-149P-201ENST00000516739 59 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 RNU6-453P-201ENST00000516819 85 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 RNU7-181P-201ENST00000517234 74 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 AP003716.2-201ENST00000528260 108 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 AC007751.1-201ENST00000529260 376 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 MIR4452-201ENST00000583004 71 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 PRELID3BP2-201ENST00000605362 201 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 AL391903.3-201ENST00000612158 163 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 AC027335.2-201ENST00000624030 375 ntBASIC0.84□□□□□ -2.27
NANOGQ9H9S0 Y_RNA.176-201ENST00000363815 109 ntBASIC0.83□□□□□ -2.28
NANOGQ9H9S0 snoU2_19.4-201ENST00000364329 80 ntBASIC0.83□□□□□ -2.28
NANOGQ9H9S0 Y_RNA.277-201ENST00000364754 102 ntBASIC0.83□□□□□ -2.28
NANOGQ9H9S0 RNU6-144P-201ENST00000383951 107 ntBASIC0.83□□□□□ -2.28
NANOGQ9H9S0 Y_RNA.486-201ENST00000384398 107 ntBASIC0.83□□□□□ -2.28
NANOGQ9H9S0 MIR222-201ENST00000384992 110 ntBASIC0.83□□□□□ -2.28
NANOGQ9H9S0 MIR1302-6-201ENST00000408466 90 ntBASIC0.83□□□□□ -2.28
NANOGQ9H9S0 Y_RNA.666-201ENST00000516187 112 ntBASIC0.83□□□□□ -2.28
NANOGQ9H9S0 AC100767.1-201ENST00000528178 123 ntBASIC0.83□□□□□ -2.28
NANOGQ9H9S0 AL442663.2-201ENST00000554385 511 ntBASIC0.83□□□□□ -2.28
NANOGQ9H9S0 MIR4764-201ENST00000580680 88 ntBASIC0.83□□□□□ -2.28
NANOGQ9H9S0 uc_338.4-201ENST00000616635 176 ntBASIC0.83□□□□□ -2.28
NANOGQ9H9S0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.83□□□□□ -2.28
NANOGQ9H9S0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.83□□□□□ -2.28
NANOGQ9H9S0 MIR335-201ENST00000362173 94 ntBASIC0.82□□□□□ -2.28
NANOGQ9H9S0 Y_RNA.122-201ENST00000363331 96 ntBASIC0.82□□□□□ -2.28
NANOGQ9H9S0 Y_RNA.162-201ENST00000363683 102 ntBASIC0.82□□□□□ -2.28
NANOGQ9H9S0 Y_RNA.229-201ENST00000364347 113 ntBASIC0.82□□□□□ -2.28
NANOGQ9H9S0 SNORA25-201ENST00000384384 134 ntBASIC0.82□□□□□ -2.28
NANOGQ9H9S0 MIR626-201ENST00000385032 94 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 213.8 ms