Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 MIR5688-201ENST00000580619 83 ntBASIC1.46□□□□□ -2.18
USP44Q9H0E7 AL161722.3-201ENST00000605789 2983 ntBASIC1.45□□□□□ -2.18
USP44Q9H0E7 Y_RNA.76-201ENST00000362931 109 ntBASIC1.45□□□□□ -2.18
USP44Q9H0E7 Y_RNA.350-201ENST00000365409 98 ntBASIC1.45□□□□□ -2.18
USP44Q9H0E7 Y_RNA.416-201ENST00000384014 113 ntBASIC1.45□□□□□ -2.18
USP44Q9H0E7 MIR548H3-201ENST00000408771 118 ntBASIC1.45□□□□□ -2.18
USP44Q9H0E7 AC015922.2-201ENST00000435593 184 ntBASIC1.45□□□□□ -2.18
USP44Q9H0E7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.45□□□□□ -2.18
USP44Q9H0E7 MIR3128-201ENST00000581957 66 ntBASIC1.45□□□□□ -2.18
USP44Q9H0E7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
USP44Q9H0E7 Y_RNA.539-201ENST00000384635 107 ntBASIC1.44□□□□□ -2.18
USP44Q9H0E7 Y_RNA.572-201ENST00000384757 98 ntBASIC1.44□□□□□ -2.18
USP44Q9H0E7 MIR526A1-201ENST00000384897 85 ntBASIC1.44□□□□□ -2.18
USP44Q9H0E7 MIR526A2-201ENST00000390198 65 ntBASIC1.44□□□□□ -2.18
USP44Q9H0E7 AC023449.1-201ENST00000454464 154 ntBASIC1.44□□□□□ -2.18
USP44Q9H0E7 RNU6-917P-201ENST00000516294 104 ntBASIC1.44□□□□□ -2.18
USP44Q9H0E7 Y_RNA.673-201ENST00000516306 88 ntBASIC1.44□□□□□ -2.18
USP44Q9H0E7 Y_RNA.679-201ENST00000516416 91 ntBASIC1.44□□□□□ -2.18
USP44Q9H0E7 RN7SKP88-201ENST00000516847 250 ntBASIC1.44□□□□□ -2.18
USP44Q9H0E7 MIR4724-201ENST00000579485 89 ntBASIC1.44□□□□□ -2.18
USP44Q9H0E7 AL021707.8-201ENST00000609428 183 ntBASIC1.44□□□□□ -2.18
USP44Q9H0E7 7SK.8-201ENST00000612110 250 ntBASIC1.44□□□□□ -2.18
USP44Q9H0E7 7SK.11-201ENST00000615477 250 ntBASIC1.44□□□□□ -2.18
USP44Q9H0E7 MIR8070-201ENST00000616510 88 ntBASIC1.44□□□□□ -2.18
USP44Q9H0E7 7SK.13-201ENST00000622040 250 ntBASIC1.44□□□□□ -2.18
USP44Q9H0E7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
USP44Q9H0E7 MIR367-201ENST00000362299 68 ntBASIC1.43□□□□□ -2.18
USP44Q9H0E7 SNORD27-201ENST00000363981 72 ntBASIC1.43□□□□□ -2.18
USP44Q9H0E7 Y_RNA.307-201ENST00000365022 117 ntBASIC1.43□□□□□ -2.18
USP44Q9H0E7 SNORD26-201ENST00000384147 75 ntBASIC1.43□□□□□ -2.18
USP44Q9H0E7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.43□□□□□ -2.18
USP44Q9H0E7 RPL39P39-201ENST00000455840 151 ntBASIC1.43□□□□□ -2.18
USP44Q9H0E7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.43□□□□□ -2.18
USP44Q9H0E7 SNORD116-28-201ENST00000516123 91 ntBASIC1.43□□□□□ -2.18
USP44Q9H0E7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.43□□□□□ -2.18
USP44Q9H0E7 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.43□□□□□ -2.18
USP44Q9H0E7 AC011921.3-201ENST00000605540 361 ntBASIC1.43□□□□□ -2.18
USP44Q9H0E7 BX284668.6-201ENST00000606899 438 ntBASIC1.43□□□□□ -2.18
USP44Q9H0E7 MIR6078-201ENST00000611069 100 ntBASIC1.43□□□□□ -2.18
USP44Q9H0E7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.43□□□□□ -2.18
USP44Q9H0E7 Y_RNA.802-201ENST00000614892 130 ntBASIC1.43□□□□□ -2.18
USP44Q9H0E7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
USP44Q9H0E7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
USP44Q9H0E7 Y_RNA.20-201ENST00000362479 113 ntBASIC1.42□□□□□ -2.18
USP44Q9H0E7 Y_RNA.24-201ENST00000362508 103 ntBASIC1.42□□□□□ -2.18
USP44Q9H0E7 Y_RNA.447-201ENST00000384184 113 ntBASIC1.42□□□□□ -2.18
USP44Q9H0E7 MIR626-201ENST00000385032 94 ntBASIC1.42□□□□□ -2.18
USP44Q9H0E7 MIR136-201ENST00000385207 82 ntBASIC1.42□□□□□ -2.18
USP44Q9H0E7 MIR1298-201ENST00000408783 112 ntBASIC1.42□□□□□ -2.18
USP44Q9H0E7 AC100767.1-201ENST00000528178 123 ntBASIC1.42□□□□□ -2.18
USP44Q9H0E7 AC004817.2-201ENST00000561794 651 ntBASIC1.42□□□□□ -2.18
USP44Q9H0E7 AC008507.4-201ENST00000585464 127 ntBASIC1.42□□□□□ -2.18
USP44Q9H0E7 AL365265.1-201ENST00000621045 234 ntBASIC1.42□□□□□ -2.18
USP44Q9H0E7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
USP44Q9H0E7 SNORD14E-201ENST00000364009 85 ntBASIC1.41□□□□□ -2.18
USP44Q9H0E7 Y_RNA.304-201ENST00000365011 112 ntBASIC1.41□□□□□ -2.18
USP44Q9H0E7 SNORA8.3-201ENST00000384679 139 ntBASIC1.41□□□□□ -2.18
USP44Q9H0E7 SNORD72-201ENST00000390994 80 ntBASIC1.41□□□□□ -2.18
USP44Q9H0E7 RNA5SP496-201ENST00000391240 109 ntBASIC1.41□□□□□ -2.18
USP44Q9H0E7 SNORD58.1-201ENST00000391313 66 ntBASIC1.41□□□□□ -2.18
USP44Q9H0E7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.41□□□□□ -2.18
USP44Q9H0E7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.41□□□□□ -2.18
USP44Q9H0E7 AC006006.1-201ENST00000603082 144 ntBASIC1.41□□□□□ -2.18
USP44Q9H0E7 AL442067.1-201ENST00000613261 223 ntBASIC1.41□□□□□ -2.18
USP44Q9H0E7 Y_RNA.60-201ENST00000362831 98 ntBASIC1.4□□□□□ -2.19
USP44Q9H0E7 Y_RNA.269-201ENST00000364685 89 ntBASIC1.4□□□□□ -2.19
USP44Q9H0E7 Y_RNA.292-201ENST00000364904 97 ntBASIC1.4□□□□□ -2.19
USP44Q9H0E7 RNU6-1054P-201ENST00000411293 104 ntBASIC1.4□□□□□ -2.19
USP44Q9H0E7 AL591704.2-201ENST00000421658 181 ntBASIC1.4□□□□□ -2.19
USP44Q9H0E7 RNU6-1023P-201ENST00000516137 106 ntBASIC1.4□□□□□ -2.19
USP44Q9H0E7 RNU6-922P-201ENST00000516753 99 ntBASIC1.4□□□□□ -2.19
USP44Q9H0E7 AL160236.1-201ENST00000556317 195 ntBASIC1.4□□□□□ -2.19
USP44Q9H0E7 CYP3A52P-201ENST00000563326 91 ntBASIC1.4□□□□□ -2.19
USP44Q9H0E7 AL049861.1-201ENST00000603130 150 ntBASIC1.4□□□□□ -2.19
USP44Q9H0E7 AC091895.1-201ENST00000624494 256 ntBASIC1.4□□□□□ -2.19
USP44Q9H0E7 AL442644.1-201ENST00000454390 3105 ntBASIC1.39□□□□□ -2.19
USP44Q9H0E7 Y_RNA.65-201ENST00000362846 100 ntBASIC1.39□□□□□ -2.19
USP44Q9H0E7 RNU6-653P-201ENST00000363074 106 ntBASIC1.39□□□□□ -2.19
USP44Q9H0E7 Y_RNA.226-201ENST00000364337 114 ntBASIC1.39□□□□□ -2.19
USP44Q9H0E7 Y_RNA.229-201ENST00000364347 113 ntBASIC1.39□□□□□ -2.19
USP44Q9H0E7 RNU6-442P-201ENST00000383968 104 ntBASIC1.39□□□□□ -2.19
USP44Q9H0E7 Y_RNA.478-201ENST00000384358 107 ntBASIC1.39□□□□□ -2.19
USP44Q9H0E7 SNORD41-201ENST00000386967 70 ntBASIC1.39□□□□□ -2.19
USP44Q9H0E7 SNRPGP14-201ENST00000435400 219 ntBASIC1.39□□□□□ -2.19
USP44Q9H0E7 AC245047.8-201ENST00000456455 284 ntBASIC1.39□□□□□ -2.19
USP44Q9H0E7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.39□□□□□ -2.19
USP44Q9H0E7 RNU6-126P-201ENST00000516685 103 ntBASIC1.39□□□□□ -2.19
USP44Q9H0E7 AC090142.3-201ENST00000519012 385 ntBASIC1.39□□□□□ -2.19
USP44Q9H0E7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.39□□□□□ -2.19
USP44Q9H0E7 FAM106DP-201ENST00000586416 501 ntBASIC1.39□□□□□ -2.19
USP44Q9H0E7 uc_338.4-201ENST00000616635 176 ntBASIC1.39□□□□□ -2.19
USP44Q9H0E7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
USP44Q9H0E7 snoU2_19.4-201ENST00000364329 80 ntBASIC1.38□□□□□ -2.19
USP44Q9H0E7 SNORD38C-201ENST00000384381 69 ntBASIC1.38□□□□□ -2.19
USP44Q9H0E7 MIR516B2-201ENST00000385190 85 ntBASIC1.38□□□□□ -2.19
USP44Q9H0E7 MIR802-201ENST00000390235 94 ntBASIC1.38□□□□□ -2.19
USP44Q9H0E7 SNORA31.4-201ENST00000516049 129 ntBASIC1.38□□□□□ -2.19
USP44Q9H0E7 SNORA25.9-201ENST00000365087 128 ntBASIC1.37□□□□□ -2.19
USP44Q9H0E7 RNY4P28-201ENST00000365281 93 ntBASIC1.37□□□□□ -2.19
USP44Q9H0E7 MIR1287-201ENST00000408492 90 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 199.7 ms