Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.38□□□□□ -2.35
CCDC50Q8IVM0 RNU6-977P-201ENST00000516411 103 ntBASIC0.38□□□□□ -2.35
CCDC50Q8IVM0 RNU7-25P-201ENST00000516544 62 ntBASIC0.38□□□□□ -2.35
CCDC50Q8IVM0 MIR4771-2-201ENST00000577758 74 ntBASIC0.38□□□□□ -2.35
CCDC50Q8IVM0 MIR4771-1-201ENST00000582617 74 ntBASIC0.38□□□□□ -2.35
CCDC50Q8IVM0 Z83818.1-201ENST00000603584 150 ntBASIC0.38□□□□□ -2.35
CCDC50Q8IVM0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.38□□□□□ -2.35
CCDC50Q8IVM0 Y_RNA.547-201ENST00000384654 119 ntBASIC0.37□□□□□ -2.35
CCDC50Q8IVM0 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.37□□□□□ -2.35
CCDC50Q8IVM0 RNU6-847P-201ENST00000411115 108 ntBASIC0.37□□□□□ -2.35
CCDC50Q8IVM0 POLR2KP2-201ENST00000438155 177 ntBASIC0.37□□□□□ -2.35
CCDC50Q8IVM0 SNORD19B-201ENST00000459623 84 ntBASIC0.37□□□□□ -2.35
CCDC50Q8IVM0 UBE2V2P2-201ENST00000587677 504 ntBASIC0.37□□□□□ -2.35
CCDC50Q8IVM0 AC020891.4-201ENST00000605745 93 ntBASIC0.37□□□□□ -2.35
CCDC50Q8IVM0 MIR377-201ENST00000362145 69 ntBASIC0.36□□□□□ -2.35
CCDC50Q8IVM0 MIR18A-201ENST00000362310 71 ntBASIC0.36□□□□□ -2.35
CCDC50Q8IVM0 SNORA1.2-201ENST00000365189 134 ntBASIC0.36□□□□□ -2.35
CCDC50Q8IVM0 RNU6-1283P-201ENST00000365314 105 ntBASIC0.36□□□□□ -2.35
CCDC50Q8IVM0 RNY3-201ENST00000365484 102 ntBASIC0.36□□□□□ -2.35
CCDC50Q8IVM0 Y_RNA.376-201ENST00000365638 108 ntBASIC0.36□□□□□ -2.35
CCDC50Q8IVM0 Y_RNA.471-201ENST00000384312 102 ntBASIC0.36□□□□□ -2.35
CCDC50Q8IVM0 MT-TN-201ENST00000387400 73 ntBASIC0.36□□□□□ -2.35
CCDC50Q8IVM0 RNU6-308P-201ENST00000390957 107 ntBASIC0.36□□□□□ -2.35
CCDC50Q8IVM0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.36□□□□□ -2.35
CCDC50Q8IVM0 U8.20-201ENST00000459445 131 ntBASIC0.36□□□□□ -2.35
CCDC50Q8IVM0 RNA5SP436-201ENST00000516020 115 ntBASIC0.36□□□□□ -2.35
CCDC50Q8IVM0 RNU6-1046P-201ENST00000516538 107 ntBASIC0.36□□□□□ -2.35
CCDC50Q8IVM0 SNORA40.14-201ENST00000516543 86 ntBASIC0.36□□□□□ -2.35
CCDC50Q8IVM0 RNU6-1223P-201ENST00000517124 104 ntBASIC0.36□□□□□ -2.35
CCDC50Q8IVM0 MIR3612-201ENST00000579753 87 ntBASIC0.36□□□□□ -2.35
CCDC50Q8IVM0 AP000753.3-201ENST00000604083 169 ntBASIC0.36□□□□□ -2.35
CCDC50Q8IVM0 AL162730.1-201ENST00000605734 292 ntBASIC0.36□□□□□ -2.35
CCDC50Q8IVM0 uc_338.4-201ENST00000616635 176 ntBASIC0.36□□□□□ -2.35
CCDC50Q8IVM0 Y_RNA.252-201ENST00000364556 101 ntBASIC0.35□□□□□ -2.35
CCDC50Q8IVM0 Y_RNA.418-201ENST00000384029 102 ntBASIC0.35□□□□□ -2.35
CCDC50Q8IVM0 RNU6-383P-201ENST00000410864 94 ntBASIC0.35□□□□□ -2.35
CCDC50Q8IVM0 BTF3P11-201ENST00000426582 477 ntBASIC0.35□□□□□ -2.35
CCDC50Q8IVM0 AC091959.1-201ENST00000495857 238 ntBASIC0.35□□□□□ -2.35
CCDC50Q8IVM0 RN7SKP12-201ENST00000516275 143 ntBASIC0.35□□□□□ -2.35
CCDC50Q8IVM0 RNU6-191P-201ENST00000516295 94 ntBASIC0.35□□□□□ -2.35
CCDC50Q8IVM0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.35□□□□□ -2.35
CCDC50Q8IVM0 MIR4804-201ENST00000581683 73 ntBASIC0.35□□□□□ -2.35
CCDC50Q8IVM0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
CCDC50Q8IVM0 Y_RNA.58-201ENST00000362807 102 ntBASIC0.34□□□□□ -2.36
CCDC50Q8IVM0 Y_RNA.154-201ENST00000363624 102 ntBASIC0.34□□□□□ -2.36
CCDC50Q8IVM0 RNU1-133P-201ENST00000364867 167 ntBASIC0.34□□□□□ -2.36
CCDC50Q8IVM0 RNY3P1-201ENST00000365085 102 ntBASIC0.34□□□□□ -2.36
CCDC50Q8IVM0 SNORA50A-201ENST00000384225 134 ntBASIC0.34□□□□□ -2.36
CCDC50Q8IVM0 RNY1P14-201ENST00000384426 108 ntBASIC0.34□□□□□ -2.36
CCDC50Q8IVM0 RNU6-763P-201ENST00000390865 106 ntBASIC0.34□□□□□ -2.36
CCDC50Q8IVM0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.34□□□□□ -2.36
CCDC50Q8IVM0 MIR548O-201ENST00000408583 114 ntBASIC0.34□□□□□ -2.36
CCDC50Q8IVM0 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.34□□□□□ -2.36
CCDC50Q8IVM0 SCARNA8-201ENST00000515924 131 ntBASIC0.34□□□□□ -2.36
CCDC50Q8IVM0 MIR4676-201ENST00000583078 72 ntBASIC0.34□□□□□ -2.36
CCDC50Q8IVM0 MIR6513-201ENST00000621188 64 ntBASIC0.34□□□□□ -2.36
CCDC50Q8IVM0 AC022140.2-201ENST00000623500 188 ntBASIC0.34□□□□□ -2.36
CCDC50Q8IVM0 SNORA72.1-201ENST00000363485 129 ntBASIC0.33□□□□□ -2.36
CCDC50Q8IVM0 Y_RNA.303-201ENST00000364998 94 ntBASIC0.33□□□□□ -2.36
CCDC50Q8IVM0 Y_RNA.315-201ENST00000365117 102 ntBASIC0.33□□□□□ -2.36
CCDC50Q8IVM0 RNU1-115P-201ENST00000365329 160 ntBASIC0.33□□□□□ -2.36
CCDC50Q8IVM0 RNU6-102P-201ENST00000384485 104 ntBASIC0.33□□□□□ -2.36
CCDC50Q8IVM0 Y_RNA.529-201ENST00000384586 119 ntBASIC0.33□□□□□ -2.36
CCDC50Q8IVM0 AC236972.2-201ENST00000434979 310 ntBASIC0.33□□□□□ -2.36
CCDC50Q8IVM0 SEPT14P8-201ENST00000508026 178 ntBASIC0.33□□□□□ -2.36
CCDC50Q8IVM0 Y_RNA.666-201ENST00000516187 112 ntBASIC0.33□□□□□ -2.36
CCDC50Q8IVM0 AC040926.1-201ENST00000530195 238 ntBASIC0.33□□□□□ -2.36
CCDC50Q8IVM0 MIR4264-201ENST00000583520 66 ntBASIC0.33□□□□□ -2.36
CCDC50Q8IVM0 AC006157.1-201ENST00000611750 366 ntBASIC0.33□□□□□ -2.36
CCDC50Q8IVM0 MIR6734-201ENST00000621166 68 ntBASIC0.33□□□□□ -2.36
CCDC50Q8IVM0 MIRLET7D-201ENST00000362263 87 ntBASIC0.32□□□□□ -2.36
CCDC50Q8IVM0 RNU7-56P-201ENST00000458744 62 ntBASIC0.32□□□□□ -2.36
CCDC50Q8IVM0 RNU7-62P-201ENST00000458856 62 ntBASIC0.32□□□□□ -2.36
CCDC50Q8IVM0 RNU7-67P-201ENST00000459003 62 ntBASIC0.32□□□□□ -2.36
CCDC50Q8IVM0 AC002350.1-201ENST00000490759 375 ntBASIC0.32□□□□□ -2.36
CCDC50Q8IVM0 RNU6-1170P-201ENST00000515974 106 ntBASIC0.32□□□□□ -2.36
CCDC50Q8IVM0 RNU6-764P-201ENST00000516396 105 ntBASIC0.32□□□□□ -2.36
CCDC50Q8IVM0 RNU7-149P-201ENST00000516739 59 ntBASIC0.32□□□□□ -2.36
CCDC50Q8IVM0 RNU6-958P-201ENST00000516995 106 ntBASIC0.32□□□□□ -2.36
CCDC50Q8IVM0 AC007751.1-201ENST00000529260 376 ntBASIC0.32□□□□□ -2.36
CCDC50Q8IVM0 SNORD113-5-201ENST00000607261 78 ntBASIC0.32□□□□□ -2.36
CCDC50Q8IVM0 AC243829.6-201ENST00000612652 106 ntBASIC0.32□□□□□ -2.36
CCDC50Q8IVM0 AC007485.1-201ENST00000616755 206 ntBASIC0.32□□□□□ -2.36
CCDC50Q8IVM0 AC134878.1-201ENST00000619901 243 ntBASIC0.32□□□□□ -2.36
CCDC50Q8IVM0 SNORD113-8-201ENST00000363497 74 ntBASIC0.31□□□□□ -2.36
CCDC50Q8IVM0 Y_RNA.241-201ENST00000364470 117 ntBASIC0.31□□□□□ -2.36
CCDC50Q8IVM0 RNU6-679P-201ENST00000391003 106 ntBASIC0.31□□□□□ -2.36
CCDC50Q8IVM0 snoU13.16-201ENST00000459350 104 ntBASIC0.31□□□□□ -2.36
CCDC50Q8IVM0 MRPS35P2-201ENST00000508242 191 ntBASIC0.31□□□□□ -2.36
CCDC50Q8IVM0 RNU6-496P-201ENST00000516145 99 ntBASIC0.31□□□□□ -2.36
CCDC50Q8IVM0 Y_RNA.676-201ENST00000516393 96 ntBASIC0.31□□□□□ -2.36
CCDC50Q8IVM0 AL049861.1-201ENST00000603130 150 ntBASIC0.31□□□□□ -2.36
CCDC50Q8IVM0 MIR6740-201ENST00000618268 113 ntBASIC0.31□□□□□ -2.36
CCDC50Q8IVM0 AL138825.1-201ENST00000618587 192 ntBASIC0.31□□□□□ -2.36
CCDC50Q8IVM0 Y_RNA.70-201ENST00000362886 110 ntBASIC0.3□□□□□ -2.36
CCDC50Q8IVM0 RNU6-899P-201ENST00000363947 107 ntBASIC0.3□□□□□ -2.36
CCDC50Q8IVM0 Y_RNA.222-201ENST00000364264 102 ntBASIC0.3□□□□□ -2.36
CCDC50Q8IVM0 Y_RNA.356-201ENST00000365475 113 ntBASIC0.3□□□□□ -2.36
CCDC50Q8IVM0 SNORA24-201ENST00000384096 131 ntBASIC0.3□□□□□ -2.36
CCDC50Q8IVM0 RNU6-913P-201ENST00000390913 95 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 212.7 ms