Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RNU1-48P-201ENST00000516400 162 ntBASIC2.55□□□□□ -2
EPHB3P54753 RNU6-184P-201ENST00000516514 107 ntBASIC2.55□□□□□ -2
EPHB3P54753 AC084364.2-201ENST00000546924 395 ntBASIC2.55□□□□□ -2
EPHB3P54753 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
EPHB3P54753 Y_RNA.99-201ENST00000363138 105 ntBASIC2.54□□□□□ -2
EPHB3P54753 SNORD14E-201ENST00000364009 85 ntBASIC2.54□□□□□ -2
EPHB3P54753 SNORD114-30-201ENST00000364448 72 ntBASIC2.54□□□□□ -2
EPHB3P54753 Y_RNA.440-201ENST00000384120 114 ntBASIC2.54□□□□□ -2
EPHB3P54753 MIR548D2-201ENST00000384955 97 ntBASIC2.54□□□□□ -2
EPHB3P54753 MIR561-201ENST00000385216 97 ntBASIC2.54□□□□□ -2
EPHB3P54753 SNORA19.1-201ENST00000410656 129 ntBASIC2.54□□□□□ -2
EPHB3P54753 RNU6-938P-201ENST00000411285 103 ntBASIC2.54□□□□□ -2
EPHB3P54753 SRIP3-201ENST00000413200 219 ntBASIC2.54□□□□□ -2
EPHB3P54753 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.54□□□□□ -2
EPHB3P54753 MTATP8P2-201ENST00000435212 202 ntBASIC2.54□□□□□ -2
EPHB3P54753 RNU6-667P-201ENST00000517186 102 ntBASIC2.54□□□□□ -2
EPHB3P54753 SUMO2P16-201ENST00000519475 264 ntBASIC2.54□□□□□ -2
EPHB3P54753 AC104984.5-201ENST00000586878 94 ntBASIC2.54□□□□□ -2
EPHB3P54753 MIR1291-201ENST00000627649 87 ntBASIC2.54□□□□□ -2
EPHB3P54753 MIR2052-201ENST00000636055 55 ntBASIC2.54□□□□□ -2
EPHB3P54753 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
EPHB3P54753 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
EPHB3P54753 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
EPHB3P54753 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
EPHB3P54753 Y_RNA.220-201ENST00000364244 109 ntBASIC2.53□□□□□ -2
EPHB3P54753 RNU1-133P-201ENST00000364867 167 ntBASIC2.53□□□□□ -2
EPHB3P54753 SNORA8-201ENST00000384574 139 ntBASIC2.53□□□□□ -2
EPHB3P54753 RNA5SP323-201ENST00000391094 133 ntBASIC2.53□□□□□ -2
EPHB3P54753 RPS3AP1-201ENST00000413190 320 ntBASIC2.53□□□□□ -2
EPHB3P54753 AL445646.1-201ENST00000431784 216 ntBASIC2.53□□□□□ -2
EPHB3P54753 ATP5J2P3-201ENST00000451550 258 ntBASIC2.53□□□□□ -2
EPHB3P54753 RNU7-164P-201ENST00000459221 62 ntBASIC2.53□□□□□ -2
EPHB3P54753 RNU7-123P-201ENST00000515911 60 ntBASIC2.53□□□□□ -2
EPHB3P54753 SNORD36C-201ENST00000516733 66 ntBASIC2.53□□□□□ -2
EPHB3P54753 AL355297.2-201ENST00000604792 129 ntBASIC2.53□□□□□ -2
EPHB3P54753 AC062037.1-201ENST00000605302 128 ntBASIC2.53□□□□□ -2
EPHB3P54753 AC103810.6-201ENST00000606708 136 ntBASIC2.53□□□□□ -2
EPHB3P54753 AC046143.2-201ENST00000609789 160 ntBASIC2.53□□□□□ -2
EPHB3P54753 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
EPHB3P54753 Z82195.2-201ENST00000612348 18351 ntBASIC2.53□□□□□ -2
EPHB3P54753 AL596211.1-201ENST00000569873 2277 ntBASIC2.52□□□□□ -2.01
EPHB3P54753 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
EPHB3P54753 snoU2-30.1-201ENST00000365012 70 ntBASIC2.52□□□□□ -2.01
EPHB3P54753 Y_RNA.336-201ENST00000365307 109 ntBASIC2.52□□□□□ -2.01
EPHB3P54753 U8.17-201ENST00000391292 132 ntBASIC2.52□□□□□ -2.01
EPHB3P54753 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.52□□□□□ -2.01
EPHB3P54753 CST2P1-201ENST00000425770 87 ntBASIC2.52□□□□□ -2.01
EPHB3P54753 AL356320.1-201ENST00000429616 163 ntBASIC2.52□□□□□ -2.01
EPHB3P54753 AC009238.1-201ENST00000442165 424 ntBASIC2.52□□□□□ -2.01
EPHB3P54753 AC009237.6-201ENST00000446969 424 ntBASIC2.52□□□□□ -2.01
EPHB3P54753 AC026436.1-201ENST00000510537 270 ntBASIC2.52□□□□□ -2.01
EPHB3P54753 RNU7-70P-201ENST00000516941 66 ntBASIC2.52□□□□□ -2.01
EPHB3P54753 MIR3683-201ENST00000580847 82 ntBASIC2.52□□□□□ -2.01
EPHB3P54753 MIR3163-201ENST00000581592 73 ntBASIC2.52□□□□□ -2.01
EPHB3P54753 MIR3124-201ENST00000582636 67 ntBASIC2.52□□□□□ -2.01
EPHB3P54753 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.52□□□□□ -2.01
EPHB3P54753 AC016717.2-201ENST00000609089 5141 ntBASIC2.52□□□□□ -2.01
EPHB3P54753 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
EPHB3P54753 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
EPHB3P54753 MIR302B-201ENST00000362188 73 ntBASIC2.51□□□□□ -2.01
EPHB3P54753 SNORD68-201ENST00000363214 84 ntBASIC2.51□□□□□ -2.01
EPHB3P54753 SNORD114-6-201ENST00000364393 72 ntBASIC2.51□□□□□ -2.01
EPHB3P54753 RNU6-1104P-201ENST00000384723 104 ntBASIC2.51□□□□□ -2.01
EPHB3P54753 RNY1P7-201ENST00000384743 110 ntBASIC2.51□□□□□ -2.01
EPHB3P54753 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.51□□□□□ -2.01
EPHB3P54753 AC087499.4-201ENST00000448505 178 ntBASIC2.51□□□□□ -2.01
EPHB3P54753 AL163195.1-201ENST00000496941 348 ntBASIC2.51□□□□□ -2.01
EPHB3P54753 AP003327.1-201ENST00000529684 127 ntBASIC2.51□□□□□ -2.01
EPHB3P54753 AC141557.1-201ENST00000540982 400 ntBASIC2.51□□□□□ -2.01
EPHB3P54753 MIR4305-201ENST00000583252 102 ntBASIC2.51□□□□□ -2.01
EPHB3P54753 MIR6715A-201ENST00000615929 79 ntBASIC2.51□□□□□ -2.01
EPHB3P54753 U4atac.1-201ENST00000618345 95 ntBASIC2.51□□□□□ -2.01
EPHB3P54753 AL162726.3-218ENST00000636401 95 ntBASIC2.51□□□□□ -2.01
EPHB3P54753 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
EPHB3P54753 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
EPHB3P54753 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.5□□□□□ -2.01
EPHB3P54753 Y_RNA.93-201ENST00000363066 109 ntBASIC2.5□□□□□ -2.01
EPHB3P54753 RNU1-91P-201ENST00000364746 163 ntBASIC2.5□□□□□ -2.01
EPHB3P54753 RNU7-80P-201ENST00000459562 61 ntBASIC2.5□□□□□ -2.01
EPHB3P54753 SNORD45.4-201ENST00000516629 73 ntBASIC2.5□□□□□ -2.01
EPHB3P54753 AP003484.1-201ENST00000530974 250 ntBASIC2.5□□□□□ -2.01
EPHB3P54753 AC022523.2-201ENST00000561045 150 ntBASIC2.5□□□□□ -2.01
EPHB3P54753 MIR4658-201ENST00000584344 65 ntBASIC2.5□□□□□ -2.01
EPHB3P54753 MALAT1.1-201ENST00000618249 95 ntBASIC2.5□□□□□ -2.01
EPHB3P54753 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.5□□□□□ -2.01
EPHB3P54753 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
EPHB3P54753 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
EPHB3P54753 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
EPHB3P54753 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
EPHB3P54753 RNU6-1084P-201ENST00000362498 107 ntBASIC2.49□□□□□ -2.01
EPHB3P54753 Y_RNA.466-201ENST00000384294 113 ntBASIC2.49□□□□□ -2.01
EPHB3P54753 RNU6-160P-201ENST00000384591 107 ntBASIC2.49□□□□□ -2.01
EPHB3P54753 RNU6-1275P-201ENST00000391087 107 ntBASIC2.49□□□□□ -2.01
EPHB3P54753 RNA5SP482-201ENST00000391269 118 ntBASIC2.49□□□□□ -2.01
EPHB3P54753 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.49□□□□□ -2.01
EPHB3P54753 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.49□□□□□ -2.01
EPHB3P54753 RN7SKP12-201ENST00000516275 143 ntBASIC2.49□□□□□ -2.01
EPHB3P54753 MIR3670-2-201ENST00000582974 65 ntBASIC2.49□□□□□ -2.01
EPHB3P54753 MIR3670-1-201ENST00000584160 65 ntBASIC2.49□□□□□ -2.01
EPHB3P54753 MIR3670-3-201ENST00000584855 65 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 234.4 ms