Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 AL513534.2-201ENST00000603836 250 ntBASIC2.99□□□□□ -1.93
SOX11P35716 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SOX11P35716 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SOX11P35716 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SOX11P35716 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.98□□□□□ -1.93
SOX11P35716 AC092881.1-201ENST00000638218 2733 ntBASIC2.98□□□□□ -1.93
SOX11P35716 VTRNA1-1-201ENST00000363120 99 ntBASIC2.98□□□□□ -1.93
SOX11P35716 Y_RNA.323-201ENST00000365157 109 ntBASIC2.98□□□□□ -1.93
SOX11P35716 Y_RNA.328-201ENST00000365208 113 ntBASIC2.98□□□□□ -1.93
SOX11P35716 AL512326.2-201ENST00000426359 151 ntBASIC2.98□□□□□ -1.93
SOX11P35716 AL135938.1-201ENST00000443141 297 ntBASIC2.98□□□□□ -1.93
SOX11P35716 AC099513.1-201ENST00000490423 301 ntBASIC2.98□□□□□ -1.93
SOX11P35716 RNA5SP341-201ENST00000516261 117 ntBASIC2.98□□□□□ -1.93
SOX11P35716 RNU7-193P-201ENST00000516723 65 ntBASIC2.98□□□□□ -1.93
SOX11P35716 MIR5009-201ENST00000578736 100 ntBASIC2.98□□□□□ -1.93
SOX11P35716 SNORA7.4-201ENST00000384249 137 ntBASIC2.97□□□□□ -1.93
SOX11P35716 RNU6-1113P-201ENST00000384348 107 ntBASIC2.97□□□□□ -1.93
SOX11P35716 MIR526A1-201ENST00000384897 85 ntBASIC2.97□□□□□ -1.93
SOX11P35716 RNA5SP450-201ENST00000411206 102 ntBASIC2.97□□□□□ -1.93
SOX11P35716 SNORD123-201ENST00000459473 70 ntBASIC2.97□□□□□ -1.93
SOX11P35716 SNORA31.4-201ENST00000516049 129 ntBASIC2.97□□□□□ -1.93
SOX11P35716 RNU7-53P-201ENST00000516705 60 ntBASIC2.97□□□□□ -1.93
SOX11P35716 MIR4529-201ENST00000578110 78 ntBASIC2.97□□□□□ -1.93
SOX11P35716 FAM106DP-201ENST00000586416 501 ntBASIC2.97□□□□□ -1.93
SOX11P35716 AL162274.2-201ENST00000614406 332 ntBASIC2.97□□□□□ -1.93
SOX11P35716 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.97□□□□□ -1.93
SOX11P35716 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SOX11P35716 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SOX11P35716 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
SOX11P35716 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SOX11P35716 MIR422A-201ENST00000362286 90 ntBASIC2.96□□□□□ -1.94
SOX11P35716 RNU1-52P-201ENST00000384190 164 ntBASIC2.96□□□□□ -1.94
SOX11P35716 SNORD28B-201ENST00000390993 75 ntBASIC2.96□□□□□ -1.94
SOX11P35716 RPL39P25-201ENST00000449384 154 ntBASIC2.96□□□□□ -1.94
SOX11P35716 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.96□□□□□ -1.94
SOX11P35716 RN7SL20P-201ENST00000488827 297 ntBASIC2.96□□□□□ -1.94
SOX11P35716 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.96□□□□□ -1.94
SOX11P35716 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.96□□□□□ -1.94
SOX11P35716 AC004812.1-201ENST00000540773 146 ntBASIC2.96□□□□□ -1.94
SOX11P35716 AC141557.1-201ENST00000540982 400 ntBASIC2.96□□□□□ -1.94
SOX11P35716 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.96□□□□□ -1.94
SOX11P35716 RNU6-94P-201ENST00000607728 107 ntBASIC2.96□□□□□ -1.94
SOX11P35716 MIR887-201ENST00000401258 79 ntBASIC2.95□□□□□ -1.94
SOX11P35716 RPS29P29-201ENST00000456396 171 ntBASIC2.95□□□□□ -1.94
SOX11P35716 SNORA31.17-201ENST00000516953 127 ntBASIC2.95□□□□□ -1.94
SOX11P35716 SNORA31.25-201ENST00000517242 134 ntBASIC2.95□□□□□ -1.94
SOX11P35716 MIR5582-201ENST00000579697 68 ntBASIC2.95□□□□□ -1.94
SOX11P35716 MIR3152-201ENST00000579801 74 ntBASIC2.95□□□□□ -1.94
SOX11P35716 MIR548AR-201ENST00000582191 57 ntBASIC2.95□□□□□ -1.94
SOX11P35716 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.95□□□□□ -1.94
SOX11P35716 MIR4791-201ENST00000607666 84 ntBASIC2.95□□□□□ -1.94
SOX11P35716 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.95□□□□□ -1.94
SOX11P35716 AL035425.3-201ENST00000564206 4996 ntBASIC2.95□□□□□ -1.94
SOX11P35716 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
SOX11P35716 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
SOX11P35716 SNORA51.10-201ENST00000384418 136 ntBASIC2.94□□□□□ -1.94
SOX11P35716 RNA5SP100-201ENST00000410903 110 ntBASIC2.94□□□□□ -1.94
SOX11P35716 RNA5SP59-201ENST00000410922 110 ntBASIC2.94□□□□□ -1.94
SOX11P35716 RNU7-113P-201ENST00000459273 62 ntBASIC2.94□□□□□ -1.94
SOX11P35716 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.94□□□□□ -1.94
SOX11P35716 EIF4BP1-201ENST00000554881 351 ntBASIC2.94□□□□□ -1.94
SOX11P35716 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.94□□□□□ -1.94
SOX11P35716 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.94□□□□□ -1.94
SOX11P35716 AC131280.1-202ENST00000624067 4211 ntBASIC2.94□□□□□ -1.94
SOX11P35716 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.94□□□□□ -1.94
SOX11P35716 AC009487.2-201ENST00000420969 6821 ntBASIC2.94□□□□□ -1.94
SOX11P35716 MIR424-201ENST00000362227 98 ntBASIC2.93□□□□□ -1.94
SOX11P35716 RNU6-457P-201ENST00000363999 107 ntBASIC2.93□□□□□ -1.94
SOX11P35716 Y_RNA.531-201ENST00000384589 121 ntBASIC2.93□□□□□ -1.94
SOX11P35716 SNORD67-201ENST00000390833 111 ntBASIC2.93□□□□□ -1.94
SOX11P35716 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.93□□□□□ -1.94
SOX11P35716 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.93□□□□□ -1.94
SOX11P35716 AC103810.6-201ENST00000606708 136 ntBASIC2.93□□□□□ -1.94
SOX11P35716 AC243994.1-201ENST00000618627 109 ntBASIC2.93□□□□□ -1.94
SOX11P35716 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SOX11P35716 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
SOX11P35716 AL442644.1-201ENST00000454390 3105 ntBASIC2.93□□□□□ -1.94
SOX11P35716 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
SOX11P35716 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
SOX11P35716 Y_RNA.171-201ENST00000363760 102 ntBASIC2.92□□□□□ -1.94
SOX11P35716 RNU6-1067P-201ENST00000384752 107 ntBASIC2.92□□□□□ -1.94
SOX11P35716 RNU6-816P-201ENST00000390914 107 ntBASIC2.92□□□□□ -1.94
SOX11P35716 RNU6-1268P-201ENST00000391214 107 ntBASIC2.92□□□□□ -1.94
SOX11P35716 RNU6-1239P-201ENST00000391310 107 ntBASIC2.92□□□□□ -1.94
SOX11P35716 POLR2J4-204ENST00000418424 324 ntBASIC2.92□□□□□ -1.94
SOX11P35716 AP004217.1-201ENST00000480579 346 ntBASIC2.92□□□□□ -1.94
SOX11P35716 AC008885.1-201ENST00000514930 301 ntBASIC2.92□□□□□ -1.94
SOX11P35716 UBL5P2-201ENST00000583788 219 ntBASIC2.92□□□□□ -1.94
SOX11P35716 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.92□□□□□ -1.94
SOX11P35716 AL162726.3-218ENST00000636401 95 ntBASIC2.92□□□□□ -1.94
SOX11P35716 MIR4679-1-201ENST00000637619 75 ntBASIC2.92□□□□□ -1.94
SOX11P35716 MIR622-201ENST00000638396 96 ntBASIC2.92□□□□□ -1.94
SOX11P35716 AL365361.1-201ENST00000566942 3481 ntBASIC2.91□□□□□ -1.94
SOX11P35716 RNU1-138P-201ENST00000384093 164 ntBASIC2.91□□□□□ -1.94
SOX11P35716 RNA5SP344-201ENST00000411081 104 ntBASIC2.91□□□□□ -1.94
SOX11P35716 RNU6-893P-201ENST00000458841 100 ntBASIC2.91□□□□□ -1.94
SOX11P35716 SNORA59A-201ENST00000459326 152 ntBASIC2.91□□□□□ -1.94
SOX11P35716 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.91□□□□□ -1.94
SOX11P35716 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
SOX11P35716 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 210.7 ms