Protein–RNA interactions for Protein: P20393

NR1D1, Nuclear receptor subfamily 1 group D member 1, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1P20393 AL645939.4-201ENST00000604495 135 ntBASIC1.58□□□□□ -2.16
NR1D1P20393 RNU2-4P-201ENST00000606190 192 ntBASIC1.58□□□□□ -2.16
NR1D1P20393 RMST_2.1-201ENST00000617263 136 ntBASIC1.58□□□□□ -2.16
NR1D1P20393 AP000648.3-201ENST00000623539 4507 ntBASIC1.58□□□□□ -2.16
NR1D1P20393 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
NR1D1P20393 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
NR1D1P20393 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
NR1D1P20393 Y_RNA.23-201ENST00000362496 106 ntBASIC1.57□□□□□ -2.16
NR1D1P20393 SNORA1B-201ENST00000362535 133 ntBASIC1.57□□□□□ -2.16
NR1D1P20393 RNU6-312P-201ENST00000364629 107 ntBASIC1.57□□□□□ -2.16
NR1D1P20393 RNU6-275P-201ENST00000364910 107 ntBASIC1.57□□□□□ -2.16
NR1D1P20393 Y_RNA.374-201ENST00000365606 101 ntBASIC1.57□□□□□ -2.16
NR1D1P20393 Y_RNA.412-201ENST00000384001 104 ntBASIC1.57□□□□□ -2.16
NR1D1P20393 RN7SKP51-201ENST00000410781 304 ntBASIC1.57□□□□□ -2.16
NR1D1P20393 RNA5SP437-201ENST00000517249 129 ntBASIC1.57□□□□□ -2.16
NR1D1P20393 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.57□□□□□ -2.16
NR1D1P20393 MIR4452-201ENST00000583004 71 ntBASIC1.57□□□□□ -2.16
NR1D1P20393 AL929325.1-201ENST00000603096 117 ntBASIC1.57□□□□□ -2.16
NR1D1P20393 AL021707.8-201ENST00000609428 183 ntBASIC1.57□□□□□ -2.16
NR1D1P20393 AL512598.1-201ENST00000610158 273 ntBASIC1.57□□□□□ -2.16
NR1D1P20393 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
NR1D1P20393 RNU6-414P-201ENST00000363705 104 ntBASIC1.56□□□□□ -2.16
NR1D1P20393 Y_RNA.182-201ENST00000363880 111 ntBASIC1.56□□□□□ -2.16
NR1D1P20393 Y_RNA.242-201ENST00000364473 110 ntBASIC1.56□□□□□ -2.16
NR1D1P20393 RNU6-392P-201ENST00000364926 101 ntBASIC1.56□□□□□ -2.16
NR1D1P20393 Y_RNA.441-201ENST00000384123 112 ntBASIC1.56□□□□□ -2.16
NR1D1P20393 RNY3P5-201ENST00000384127 102 ntBASIC1.56□□□□□ -2.16
NR1D1P20393 RNU6-578P-201ENST00000390980 103 ntBASIC1.56□□□□□ -2.16
NR1D1P20393 RNU6-1228P-201ENST00000391014 107 ntBASIC1.56□□□□□ -2.16
NR1D1P20393 AL034345.1-201ENST00000407768 123 ntBASIC1.56□□□□□ -2.16
NR1D1P20393 Y_RNA.621-201ENST00000411065 96 ntBASIC1.56□□□□□ -2.16
NR1D1P20393 AC004965.1-201ENST00000413033 213 ntBASIC1.56□□□□□ -2.16
NR1D1P20393 RPL30P13-201ENST00000418873 348 ntBASIC1.56□□□□□ -2.16
NR1D1P20393 HSPE1P9-201ENST00000440046 311 ntBASIC1.56□□□□□ -2.16
NR1D1P20393 AL606517.2-201ENST00000442855 241 ntBASIC1.56□□□□□ -2.16
NR1D1P20393 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.56□□□□□ -2.16
NR1D1P20393 AC023449.1-201ENST00000454464 154 ntBASIC1.56□□□□□ -2.16
NR1D1P20393 snoU13.9-201ENST00000458927 103 ntBASIC1.56□□□□□ -2.16
NR1D1P20393 HMGN1P7-201ENST00000491722 313 ntBASIC1.56□□□□□ -2.16
NR1D1P20393 RNU6-453P-201ENST00000516819 85 ntBASIC1.56□□□□□ -2.16
NR1D1P20393 AC108706.1-201ENST00000611053 297 ntBASIC1.56□□□□□ -2.16
NR1D1P20393 MIR7974-201ENST00000615835 79 ntBASIC1.56□□□□□ -2.16
NR1D1P20393 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
NR1D1P20393 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.55□□□□□ -2.16
NR1D1P20393 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
NR1D1P20393 RNU1-42P-201ENST00000364033 160 ntBASIC1.55□□□□□ -2.16
NR1D1P20393 RNU4-41P-201ENST00000364426 143 ntBASIC1.55□□□□□ -2.16
NR1D1P20393 Y_RNA.265-201ENST00000364677 108 ntBASIC1.55□□□□□ -2.16
NR1D1P20393 Y_RNA.327-201ENST00000365201 102 ntBASIC1.55□□□□□ -2.16
NR1D1P20393 MIR1267-201ENST00000408723 78 ntBASIC1.55□□□□□ -2.16
NR1D1P20393 AC245047.8-201ENST00000456455 284 ntBASIC1.55□□□□□ -2.16
NR1D1P20393 snoU13.27-201ENST00000459278 104 ntBASIC1.55□□□□□ -2.16
NR1D1P20393 Y_RNA.797-201ENST00000515977 94 ntBASIC1.55□□□□□ -2.16
NR1D1P20393 SNORA77B-201ENST00000578179 125 ntBASIC1.55□□□□□ -2.16
NR1D1P20393 MIR4762-201ENST00000585261 75 ntBASIC1.55□□□□□ -2.16
NR1D1P20393 AC087685.1-201ENST00000587507 141 ntBASIC1.55□□□□□ -2.16
NR1D1P20393 JPX_2.1-201ENST00000614161 69 ntBASIC1.55□□□□□ -2.16
NR1D1P20393 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
NR1D1P20393 RNU6-1080P-201ENST00000383982 107 ntBASIC1.54□□□□□ -2.16
NR1D1P20393 MT-TT-201ENST00000387460 66 ntBASIC1.54□□□□□ -2.16
NR1D1P20393 AL606845.1-201ENST00000404881 255 ntBASIC1.54□□□□□ -2.16
NR1D1P20393 AL603908.1-201ENST00000406098 201 ntBASIC1.54□□□□□ -2.16
NR1D1P20393 RNU6-394P-201ENST00000410735 107 ntBASIC1.54□□□□□ -2.16
NR1D1P20393 RNU5E-9P-201ENST00000411164 104 ntBASIC1.54□□□□□ -2.16
NR1D1P20393 RNA5SP61-201ENST00000516453 100 ntBASIC1.54□□□□□ -2.16
NR1D1P20393 SNORA31.10-201ENST00000516482 106 ntBASIC1.54□□□□□ -2.16
NR1D1P20393 AC109810.1-201ENST00000534066 224 ntBASIC1.54□□□□□ -2.16
NR1D1P20393 MIR4709-201ENST00000577272 72 ntBASIC1.54□□□□□ -2.16
NR1D1P20393 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
NR1D1P20393 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.53□□□□□ -2.16
NR1D1P20393 RNU6-1209P-201ENST00000363655 107 ntBASIC1.53□□□□□ -2.16
NR1D1P20393 U8.5-201ENST00000364528 136 ntBASIC1.53□□□□□ -2.16
NR1D1P20393 Y_RNA.253-201ENST00000364562 112 ntBASIC1.53□□□□□ -2.16
NR1D1P20393 RNU6-1031P-201ENST00000384773 107 ntBASIC1.53□□□□□ -2.16
NR1D1P20393 MIR1304-201ENST00000408243 91 ntBASIC1.53□□□□□ -2.16
NR1D1P20393 RNU6-1135P-201ENST00000411083 103 ntBASIC1.53□□□□□ -2.16
NR1D1P20393 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.53□□□□□ -2.16
NR1D1P20393 SUMO1P3-201ENST00000439961 304 ntBASIC1.53□□□□□ -2.16
NR1D1P20393 JTBP1-201ENST00000441314 247 ntBASIC1.53□□□□□ -2.16
NR1D1P20393 SNORD11-201ENST00000459124 84 ntBASIC1.53□□□□□ -2.16
NR1D1P20393 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.53□□□□□ -2.16
NR1D1P20393 RNU6-126P-201ENST00000516685 103 ntBASIC1.53□□□□□ -2.16
NR1D1P20393 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.53□□□□□ -2.16
NR1D1P20393 RPL23AP91-201ENST00000569211 455 ntBASIC1.53□□□□□ -2.16
NR1D1P20393 MIR4431-201ENST00000579990 94 ntBASIC1.53□□□□□ -2.16
NR1D1P20393 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
NR1D1P20393 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
NR1D1P20393 Y_RNA.36-201ENST00000362602 112 ntBASIC1.52□□□□□ -2.17
NR1D1P20393 RNU4-84P-201ENST00000364200 139 ntBASIC1.52□□□□□ -2.17
NR1D1P20393 SNORA4.2-201ENST00000365313 147 ntBASIC1.52□□□□□ -2.17
NR1D1P20393 RNU6-728P-201ENST00000365375 104 ntBASIC1.52□□□□□ -2.17
NR1D1P20393 RNU4-43P-201ENST00000410628 137 ntBASIC1.52□□□□□ -2.17
NR1D1P20393 RNU2-55P-201ENST00000411146 174 ntBASIC1.52□□□□□ -2.17
NR1D1P20393 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.52□□□□□ -2.17
NR1D1P20393 SNRPGP10-201ENST00000432323 225 ntBASIC1.52□□□□□ -2.17
NR1D1P20393 HSPE1P24-201ENST00000450782 238 ntBASIC1.52□□□□□ -2.17
NR1D1P20393 OR9P1P-201ENST00000496431 281 ntBASIC1.52□□□□□ -2.17
NR1D1P20393 RNU6-255P-201ENST00000516957 105 ntBASIC1.52□□□□□ -2.17
NR1D1P20393 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.52□□□□□ -2.17
NR1D1P20393 SNORD53B-201ENST00000577887 78 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 541.9 ms