Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 MIR515-1-201ENST00000384884 83 ntBASIC1.11□□□□□ -2.23
HOXC4P09017 MIR520G-201ENST00000385064 90 ntBASIC1.11□□□□□ -2.23
HOXC4P09017 RNU6-381P-201ENST00000391259 108 ntBASIC1.11□□□□□ -2.23
HOXC4P09017 AL591704.2-201ENST00000421658 181 ntBASIC1.11□□□□□ -2.23
HOXC4P09017 AC245047.3-201ENST00000429428 127 ntBASIC1.11□□□□□ -2.23
HOXC4P09017 Z98949.2-201ENST00000440996 144 ntBASIC1.11□□□□□ -2.23
HOXC4P09017 AC245047.8-201ENST00000456455 284 ntBASIC1.11□□□□□ -2.23
HOXC4P09017 Y_RNA.644-201ENST00000459006 113 ntBASIC1.11□□□□□ -2.23
HOXC4P09017 COX6CP14-201ENST00000469580 174 ntBASIC1.11□□□□□ -2.23
HOXC4P09017 RNU6-561P-201ENST00000516222 102 ntBASIC1.11□□□□□ -2.23
HOXC4P09017 Y_RNA.674-201ENST00000516362 113 ntBASIC1.11□□□□□ -2.23
HOXC4P09017 RNU7-116P-201ENST00000516940 62 ntBASIC1.11□□□□□ -2.23
HOXC4P09017 SNORA81.3-201ENST00000517283 198 ntBASIC1.11□□□□□ -2.23
HOXC4P09017 AC004792.1-201ENST00000614523 137 ntBASIC1.11□□□□□ -2.23
HOXC4P09017 Y_RNA.802-201ENST00000614892 130 ntBASIC1.11□□□□□ -2.23
HOXC4P09017 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
HOXC4P09017 RNU6-1209P-201ENST00000363655 107 ntBASIC1.1□□□□□ -2.23
HOXC4P09017 RNU6-674P-201ENST00000363831 107 ntBASIC1.1□□□□□ -2.23
HOXC4P09017 Y_RNA.229-201ENST00000364347 113 ntBASIC1.1□□□□□ -2.23
HOXC4P09017 Y_RNA.253-201ENST00000364562 112 ntBASIC1.1□□□□□ -2.23
HOXC4P09017 SNORA8.3-201ENST00000384679 139 ntBASIC1.1□□□□□ -2.23
HOXC4P09017 RNU6-440P-201ENST00000390882 105 ntBASIC1.1□□□□□ -2.23
HOXC4P09017 RNU2-64P-201ENST00000411315 191 ntBASIC1.1□□□□□ -2.23
HOXC4P09017 RPS27P16-201ENST00000425758 201 ntBASIC1.1□□□□□ -2.23
HOXC4P09017 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.1□□□□□ -2.23
HOXC4P09017 AC087343.1-201ENST00000477341 475 ntBASIC1.1□□□□□ -2.23
HOXC4P09017 AC074198.2-201ENST00000508153 258 ntBASIC1.1□□□□□ -2.23
HOXC4P09017 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.1□□□□□ -2.23
HOXC4P09017 RNU6-1116P-201ENST00000517269 99 ntBASIC1.1□□□□□ -2.23
HOXC4P09017 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.1□□□□□ -2.23
HOXC4P09017 AC090821.2-201ENST00000523552 176 ntBASIC1.1□□□□□ -2.23
HOXC4P09017 RPL23AP91-201ENST00000569211 455 ntBASIC1.1□□□□□ -2.23
HOXC4P09017 RNU2-4P-201ENST00000606190 192 ntBASIC1.1□□□□□ -2.23
HOXC4P09017 AL591926.4-201ENST00000616895 298 ntBASIC1.1□□□□□ -2.23
HOXC4P09017 MIR8054-201ENST00000620877 86 ntBASIC1.1□□□□□ -2.23
HOXC4P09017 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.1□□□□□ -2.23
HOXC4P09017 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
HOXC4P09017 Y_RNA.150-201ENST00000363562 102 ntBASIC1.09□□□□□ -2.23
HOXC4P09017 RNU6-682P-201ENST00000363843 106 ntBASIC1.09□□□□□ -2.23
HOXC4P09017 RNU6-144P-201ENST00000383951 107 ntBASIC1.09□□□□□ -2.23
HOXC4P09017 Y_RNA.785-201ENST00000384290 109 ntBASIC1.09□□□□□ -2.23
HOXC4P09017 RNU6-1065P-201ENST00000384513 106 ntBASIC1.09□□□□□ -2.23
HOXC4P09017 MIR526A2-201ENST00000390198 65 ntBASIC1.09□□□□□ -2.23
HOXC4P09017 Y_RNA.793-201ENST00000411222 111 ntBASIC1.09□□□□□ -2.23
HOXC4P09017 RPL30P7-201ENST00000479312 323 ntBASIC1.09□□□□□ -2.23
HOXC4P09017 NDUFA4P2-201ENST00000489989 244 ntBASIC1.09□□□□□ -2.23
HOXC4P09017 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.09□□□□□ -2.23
HOXC4P09017 RNU6-1219P-201ENST00000516143 112 ntBASIC1.09□□□□□ -2.23
HOXC4P09017 RNU6-861P-201ENST00000516745 106 ntBASIC1.09□□□□□ -2.23
HOXC4P09017 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.09□□□□□ -2.23
HOXC4P09017 MIR4724-201ENST00000579485 89 ntBASIC1.09□□□□□ -2.23
HOXC4P09017 MIR3937-201ENST00000580135 106 ntBASIC1.09□□□□□ -2.23
HOXC4P09017 AL049861.1-201ENST00000603130 150 ntBASIC1.09□□□□□ -2.23
HOXC4P09017 AL021707.8-201ENST00000609428 183 ntBASIC1.09□□□□□ -2.23
HOXC4P09017 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
HOXC4P09017 MIR367-201ENST00000362299 68 ntBASIC1.08□□□□□ -2.24
HOXC4P09017 Y_RNA.29-201ENST00000362570 113 ntBASIC1.08□□□□□ -2.24
HOXC4P09017 RNU6-1020P-201ENST00000363684 107 ntBASIC1.08□□□□□ -2.24
HOXC4P09017 RNU4-17P-201ENST00000365598 141 ntBASIC1.08□□□□□ -2.24
HOXC4P09017 MIR1287-201ENST00000408492 90 ntBASIC1.08□□□□□ -2.24
HOXC4P09017 AL161935.2-201ENST00000414627 60 ntBASIC1.08□□□□□ -2.24
HOXC4P09017 MLLT10P1-201ENST00000418346 262 ntBASIC1.08□□□□□ -2.24
HOXC4P09017 PIGPP3-201ENST00000425307 415 ntBASIC1.08□□□□□ -2.24
HOXC4P09017 STAG3L5P-204ENST00000443759 179 ntBASIC1.08□□□□□ -2.24
HOXC4P09017 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.08□□□□□ -2.24
HOXC4P09017 AL138752.1-201ENST00000452964 351 ntBASIC1.08□□□□□ -2.24
HOXC4P09017 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.08□□□□□ -2.24
HOXC4P09017 SNORD11-201ENST00000459124 84 ntBASIC1.08□□□□□ -2.24
HOXC4P09017 snoU13.27-201ENST00000459278 104 ntBASIC1.08□□□□□ -2.24
HOXC4P09017 AL049830.1-201ENST00000468034 425 ntBASIC1.08□□□□□ -2.24
HOXC4P09017 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.08□□□□□ -2.24
HOXC4P09017 RN7SKP179-201ENST00000516126 217 ntBASIC1.08□□□□□ -2.24
HOXC4P09017 AP002392.1-201ENST00000537692 208 ntBASIC1.08□□□□□ -2.24
HOXC4P09017 AC015688.6-201ENST00000577737 104 ntBASIC1.08□□□□□ -2.24
HOXC4P09017 Z83818.1-201ENST00000603584 150 ntBASIC1.08□□□□□ -2.24
HOXC4P09017 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
HOXC4P09017 SNORD68-201ENST00000363214 84 ntBASIC1.07□□□□□ -2.24
HOXC4P09017 Y_RNA.233-201ENST00000364407 101 ntBASIC1.07□□□□□ -2.24
HOXC4P09017 Y_RNA.412-201ENST00000384001 104 ntBASIC1.07□□□□□ -2.24
HOXC4P09017 Y_RNA.571-201ENST00000384753 98 ntBASIC1.07□□□□□ -2.24
HOXC4P09017 MIR522-201ENST00000385071 87 ntBASIC1.07□□□□□ -2.24
HOXC4P09017 Y_RNA.587-201ENST00000391210 103 ntBASIC1.07□□□□□ -2.24
HOXC4P09017 PCNPP3-201ENST00000393579 471 ntBASIC1.07□□□□□ -2.24
HOXC4P09017 AL606845.1-201ENST00000404881 255 ntBASIC1.07□□□□□ -2.24
HOXC4P09017 CALM2P4-201ENST00000430810 426 ntBASIC1.07□□□□□ -2.24
HOXC4P09017 SNRPGP10-201ENST00000432323 225 ntBASIC1.07□□□□□ -2.24
HOXC4P09017 RNU7-120P-201ENST00000459334 63 ntBASIC1.07□□□□□ -2.24
HOXC4P09017 RNU7-94P-201ENST00000459576 63 ntBASIC1.07□□□□□ -2.24
HOXC4P09017 OR9P1P-201ENST00000496431 281 ntBASIC1.07□□□□□ -2.24
HOXC4P09017 RNU6-1007P-201ENST00000516586 107 ntBASIC1.07□□□□□ -2.24
HOXC4P09017 RNU2-56P-201ENST00000516826 190 ntBASIC1.07□□□□□ -2.24
HOXC4P09017 AP002004.2-201ENST00000531656 154 ntBASIC1.07□□□□□ -2.24
HOXC4P09017 AC095038.3-201ENST00000634439 195 ntBASIC1.07□□□□□ -2.24
HOXC4P09017 U6.106-201ENST00000636360 105 ntBASIC1.07□□□□□ -2.24
HOXC4P09017 MIRLET7C-201ENST00000362160 84 ntBASIC1.06□□□□□ -2.24
HOXC4P09017 Y_RNA.7-201ENST00000362352 102 ntBASIC1.06□□□□□ -2.24
HOXC4P09017 Y_RNA.182-201ENST00000363880 111 ntBASIC1.06□□□□□ -2.24
HOXC4P09017 Y_RNA.265-201ENST00000364677 108 ntBASIC1.06□□□□□ -2.24
HOXC4P09017 SNORD50B-201ENST00000364995 70 ntBASIC1.06□□□□□ -2.24
HOXC4P09017 MIR616-201ENST00000385293 97 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 191.3 ms