Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC114811.1-201ENST00000507207 168 ntBASIC1.66□□□□□ -2.14
MMP3P08254 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.66□□□□□ -2.14
MMP3P08254 MIR2681-201ENST00000581814 105 ntBASIC1.66□□□□□ -2.14
MMP3P08254 MIR3668-201ENST00000582138 75 ntBASIC1.66□□□□□ -2.14
MMP3P08254 MIR6504-201ENST00000613520 61 ntBASIC1.66□□□□□ -2.14
MMP3P08254 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.66□□□□□ -2.14
MMP3P08254 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.66□□□□□ -2.14
MMP3P08254 RNU6-1084P-201ENST00000362498 107 ntBASIC1.65□□□□□ -2.15
MMP3P08254 Y_RNA.182-201ENST00000363880 111 ntBASIC1.65□□□□□ -2.15
MMP3P08254 U8.5-201ENST00000364528 136 ntBASIC1.65□□□□□ -2.15
MMP3P08254 RNU6-163P-201ENST00000384396 106 ntBASIC1.65□□□□□ -2.15
MMP3P08254 MIR616-201ENST00000385293 97 ntBASIC1.65□□□□□ -2.15
MMP3P08254 RNU6-907P-201ENST00000390924 102 ntBASIC1.65□□□□□ -2.15
MMP3P08254 RNU6-360P-201ENST00000390944 104 ntBASIC1.65□□□□□ -2.15
MMP3P08254 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.65□□□□□ -2.15
MMP3P08254 RNU7-28P-201ENST00000516759 62 ntBASIC1.65□□□□□ -2.15
MMP3P08254 SNORA81.3-201ENST00000517283 198 ntBASIC1.65□□□□□ -2.15
MMP3P08254 AP002392.1-201ENST00000537692 208 ntBASIC1.65□□□□□ -2.15
MMP3P08254 AC120024.3-201ENST00000603167 156 ntBASIC1.65□□□□□ -2.15
MMP3P08254 Z83818.1-201ENST00000603584 150 ntBASIC1.65□□□□□ -2.15
MMP3P08254 AC103810.8-201ENST00000607347 118 ntBASIC1.65□□□□□ -2.15
MMP3P08254 AL157834.3-201ENST00000615543 103 ntBASIC1.65□□□□□ -2.15
MMP3P08254 SNORD3E-202ENST00000627253 216 ntBASIC1.65□□□□□ -2.15
MMP3P08254 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.65□□□□□ -2.15
MMP3P08254 Y_RNA.7-201ENST00000362352 102 ntBASIC1.64□□□□□ -2.15
MMP3P08254 RNU4-70P-201ENST00000384579 139 ntBASIC1.64□□□□□ -2.15
MMP3P08254 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
MMP3P08254 MIR1304-201ENST00000408243 91 ntBASIC1.64□□□□□ -2.15
MMP3P08254 RN7SKP51-201ENST00000410781 304 ntBASIC1.64□□□□□ -2.15
MMP3P08254 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.64□□□□□ -2.15
MMP3P08254 RNU7-12P-201ENST00000516030 62 ntBASIC1.64□□□□□ -2.15
MMP3P08254 RN7SKP164-201ENST00000516138 266 ntBASIC1.64□□□□□ -2.15
MMP3P08254 RNU6-1219P-201ENST00000516143 112 ntBASIC1.64□□□□□ -2.15
MMP3P08254 SNORD45.4-201ENST00000516629 73 ntBASIC1.64□□□□□ -2.15
MMP3P08254 RNU7-149P-201ENST00000516739 59 ntBASIC1.64□□□□□ -2.15
MMP3P08254 SUMO2P16-201ENST00000519475 264 ntBASIC1.64□□□□□ -2.15
MMP3P08254 uc_338.4-201ENST00000616635 176 ntBASIC1.64□□□□□ -2.15
MMP3P08254 AC106754.2-201ENST00000623006 233 ntBASIC1.64□□□□□ -2.15
MMP3P08254 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
MMP3P08254 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
MMP3P08254 Y_RNA.29-201ENST00000362570 113 ntBASIC1.63□□□□□ -2.15
MMP3P08254 Y_RNA.412-201ENST00000384001 104 ntBASIC1.63□□□□□ -2.15
MMP3P08254 RNA5SP496-201ENST00000391240 109 ntBASIC1.63□□□□□ -2.15
MMP3P08254 MIR1267-201ENST00000408723 78 ntBASIC1.63□□□□□ -2.15
MMP3P08254 FTH1P12-201ENST00000432137 551 ntBASIC1.63□□□□□ -2.15
MMP3P08254 AL138752.1-201ENST00000452964 351 ntBASIC1.63□□□□□ -2.15
MMP3P08254 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.63□□□□□ -2.15
MMP3P08254 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.63□□□□□ -2.15
MMP3P08254 MIR4762-201ENST00000585261 75 ntBASIC1.63□□□□□ -2.15
MMP3P08254 AC008507.4-201ENST00000585464 127 ntBASIC1.63□□□□□ -2.15
MMP3P08254 U6.106-201ENST00000636360 105 ntBASIC1.63□□□□□ -2.15
MMP3P08254 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
MMP3P08254 Y_RNA.233-201ENST00000364407 101 ntBASIC1.62□□□□□ -2.15
MMP3P08254 MIR660-201ENST00000385235 97 ntBASIC1.62□□□□□ -2.15
MMP3P08254 MIR802-201ENST00000390235 94 ntBASIC1.62□□□□□ -2.15
MMP3P08254 RNU6-1228P-201ENST00000391014 107 ntBASIC1.62□□□□□ -2.15
MMP3P08254 JTBP1-201ENST00000441314 247 ntBASIC1.62□□□□□ -2.15
MMP3P08254 Y_RNA.797-201ENST00000515977 94 ntBASIC1.62□□□□□ -2.15
MMP3P08254 RNU6-861P-201ENST00000516745 106 ntBASIC1.62□□□□□ -2.15
MMP3P08254 MIR4744-201ENST00000581563 82 ntBASIC1.62□□□□□ -2.15
MMP3P08254 AC108706.1-201ENST00000611053 297 ntBASIC1.62□□□□□ -2.15
MMP3P08254 AL391903.3-201ENST00000612158 163 ntBASIC1.62□□□□□ -2.15
MMP3P08254 AC004792.1-201ENST00000614523 137 ntBASIC1.62□□□□□ -2.15
MMP3P08254 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
MMP3P08254 MIR424-201ENST00000362227 98 ntBASIC1.61□□□□□ -2.15
MMP3P08254 snoU2-30.1-201ENST00000365012 70 ntBASIC1.61□□□□□ -2.15
MMP3P08254 MT-TR-201ENST00000387439 65 ntBASIC1.61□□□□□ -2.15
MMP3P08254 RNU6-578P-201ENST00000390980 103 ntBASIC1.61□□□□□ -2.15
MMP3P08254 AC023449.1-201ENST00000454464 154 ntBASIC1.61□□□□□ -2.15
MMP3P08254 CYCTP-201ENST00000504253 315 ntBASIC1.61□□□□□ -2.15
MMP3P08254 AC074198.2-201ENST00000508153 258 ntBASIC1.61□□□□□ -2.15
MMP3P08254 SNORD77.4-201ENST00000516158 81 ntBASIC1.61□□□□□ -2.15
MMP3P08254 MIR8074-201ENST00000615081 81 ntBASIC1.61□□□□□ -2.15
MMP3P08254 Pinc.1-201ENST00000616452 154 ntBASIC1.61□□□□□ -2.15
MMP3P08254 AL513423.1-201ENST00000621695 132 ntBASIC1.61□□□□□ -2.15
MMP3P08254 Y_RNA.91-201ENST00000363042 107 ntBASIC1.6□□□□□ -2.15
MMP3P08254 Y_RNA.150-201ENST00000363562 102 ntBASIC1.6□□□□□ -2.15
MMP3P08254 SNORD45.3-201ENST00000363836 72 ntBASIC1.6□□□□□ -2.15
MMP3P08254 Y_RNA.191-201ENST00000363972 113 ntBASIC1.6□□□□□ -2.15
MMP3P08254 SNORD14E-201ENST00000364009 85 ntBASIC1.6□□□□□ -2.15
MMP3P08254 MIR194-1-201ENST00000384892 85 ntBASIC1.6□□□□□ -2.15
MMP3P08254 MIR516B2-201ENST00000385190 85 ntBASIC1.6□□□□□ -2.15
MMP3P08254 AL161935.2-201ENST00000414627 60 ntBASIC1.6□□□□□ -2.15
MMP3P08254 AL121914.1-201ENST00000450188 156 ntBASIC1.6□□□□□ -2.15
MMP3P08254 SNRPGP8-201ENST00000454064 226 ntBASIC1.6□□□□□ -2.15
MMP3P08254 RNU1-123P-201ENST00000458950 160 ntBASIC1.6□□□□□ -2.15
MMP3P08254 AC109810.1-201ENST00000534066 224 ntBASIC1.6□□□□□ -2.15
MMP3P08254 SNORA77B-201ENST00000578179 125 ntBASIC1.6□□□□□ -2.15
MMP3P08254 MIR5688-201ENST00000580619 83 ntBASIC1.6□□□□□ -2.15
MMP3P08254 SNORA4-201ENST00000584302 138 ntBASIC1.6□□□□□ -2.15
MMP3P08254 MIR8063-201ENST00000621930 81 ntBASIC1.6□□□□□ -2.15
MMP3P08254 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
MMP3P08254 RNU6-103P-201ENST00000363686 107 ntBASIC1.59□□□□□ -2.15
MMP3P08254 RNU6-682P-201ENST00000363843 106 ntBASIC1.59□□□□□ -2.15
MMP3P08254 RNA5SP259-201ENST00000365541 109 ntBASIC1.59□□□□□ -2.15
MMP3P08254 Y_RNA.785-201ENST00000384290 109 ntBASIC1.59□□□□□ -2.15
MMP3P08254 Y_RNA.466-201ENST00000384294 113 ntBASIC1.59□□□□□ -2.15
MMP3P08254 Y_RNA.486-201ENST00000384398 107 ntBASIC1.59□□□□□ -2.15
MMP3P08254 MIR15B-201ENST00000385045 98 ntBASIC1.59□□□□□ -2.15
MMP3P08254 MIR513A1-201ENST00000385138 129 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms