Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.87□□□□□ -2.27
TIMP1P01033 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.87□□□□□ -2.27
TIMP1P01033 AC027335.2-201ENST00000624030 375 ntBASIC0.87□□□□□ -2.27
TIMP1P01033 MIR924-201ENST00000638017 53 ntBASIC0.87□□□□□ -2.27
TIMP1P01033 snoU2_19.2-201ENST00000363024 80 ntBASIC0.86□□□□□ -2.27
TIMP1P01033 Y_RNA.115-201ENST00000363272 98 ntBASIC0.86□□□□□ -2.27
TIMP1P01033 RNU1-124P-201ENST00000363861 145 ntBASIC0.86□□□□□ -2.27
TIMP1P01033 SNORD14E-201ENST00000364009 85 ntBASIC0.86□□□□□ -2.27
TIMP1P01033 RNU6-326P-201ENST00000365480 107 ntBASIC0.86□□□□□ -2.27
TIMP1P01033 RNU6-144P-201ENST00000383951 107 ntBASIC0.86□□□□□ -2.27
TIMP1P01033 SNORA53-201ENST00000391141 249 ntBASIC0.86□□□□□ -2.27
TIMP1P01033 RNU6-985P-201ENST00000410182 104 ntBASIC0.86□□□□□ -2.27
TIMP1P01033 AC098869.1-201ENST00000481627 292 ntBASIC0.86□□□□□ -2.27
TIMP1P01033 SNORD111.1-201ENST00000516421 86 ntBASIC0.86□□□□□ -2.27
TIMP1P01033 RNU2-31P-201ENST00000516954 155 ntBASIC0.86□□□□□ -2.27
TIMP1P01033 RNU6-1137P-201ENST00000517073 99 ntBASIC0.86□□□□□ -2.27
TIMP1P01033 AC005357.1-201ENST00000588399 301 ntBASIC0.86□□□□□ -2.27
TIMP1P01033 AL512605.2-201ENST00000592972 256 ntBASIC0.86□□□□□ -2.27
TIMP1P01033 AC037487.3-201ENST00000606668 112 ntBASIC0.86□□□□□ -2.27
TIMP1P01033 Y_RNA.153-201ENST00000363615 91 ntBASIC0.85□□□□□ -2.27
TIMP1P01033 RNU6-639P-201ENST00000384074 107 ntBASIC0.85□□□□□ -2.27
TIMP1P01033 MIR508-201ENST00000384857 115 ntBASIC0.85□□□□□ -2.27
TIMP1P01033 MIR215-201ENST00000384858 110 ntBASIC0.85□□□□□ -2.27
TIMP1P01033 MIR516B2-201ENST00000385190 85 ntBASIC0.85□□□□□ -2.27
TIMP1P01033 RNU6-910P-201ENST00000390844 107 ntBASIC0.85□□□□□ -2.27
TIMP1P01033 RNU6-763P-201ENST00000390865 106 ntBASIC0.85□□□□□ -2.27
TIMP1P01033 MTCO2P33-201ENST00000402100 465 ntBASIC0.85□□□□□ -2.27
TIMP1P01033 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.85□□□□□ -2.27
TIMP1P01033 MRPS35P2-201ENST00000508242 191 ntBASIC0.85□□□□□ -2.27
TIMP1P01033 SNORD116-28-201ENST00000516123 91 ntBASIC0.85□□□□□ -2.27
TIMP1P01033 RNU6-1007P-201ENST00000516586 107 ntBASIC0.85□□□□□ -2.27
TIMP1P01033 SNORA74.3-201ENST00000517108 154 ntBASIC0.85□□□□□ -2.27
TIMP1P01033 AL096861.1-201ENST00000610899 123 ntBASIC0.85□□□□□ -2.27
TIMP1P01033 AC134026.1-201ENST00000623249 2239 ntBASIC0.84□□□□□ -2.27
TIMP1P01033 AL391516.1-201ENST00000554380 2449 ntBASIC0.84□□□□□ -2.27
TIMP1P01033 Y_RNA.64-201ENST00000362845 102 ntBASIC0.84□□□□□ -2.27
TIMP1P01033 RNU6-806P-201ENST00000365147 105 ntBASIC0.84□□□□□ -2.27
TIMP1P01033 Y_RNA.541-201ENST00000384640 113 ntBASIC0.84□□□□□ -2.27
TIMP1P01033 SNORD12-201ENST00000391002 90 ntBASIC0.84□□□□□ -2.27
TIMP1P01033 RPL21P38-201ENST00000418090 167 ntBASIC0.84□□□□□ -2.27
TIMP1P01033 AL731563.1-201ENST00000442202 214 ntBASIC0.84□□□□□ -2.27
TIMP1P01033 NDUFA4P2-201ENST00000489989 244 ntBASIC0.84□□□□□ -2.27
TIMP1P01033 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
TIMP1P01033 RNA5SP330-201ENST00000517096 96 ntBASIC0.84□□□□□ -2.27
TIMP1P01033 AP003733.2-201ENST00000529409 171 ntBASIC0.84□□□□□ -2.27
TIMP1P01033 RPL23AP91-201ENST00000569211 455 ntBASIC0.84□□□□□ -2.27
TIMP1P01033 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.84□□□□□ -2.28
TIMP1P01033 SNORA25.1-201ENST00000362326 128 ntBASIC0.83□□□□□ -2.28
TIMP1P01033 Y_RNA.26-201ENST00000362539 101 ntBASIC0.83□□□□□ -2.28
TIMP1P01033 RNU6-1205P-201ENST00000363625 106 ntBASIC0.83□□□□□ -2.28
TIMP1P01033 Y_RNA.242-201ENST00000364473 110 ntBASIC0.83□□□□□ -2.28
TIMP1P01033 RNU6-442P-201ENST00000383968 104 ntBASIC0.83□□□□□ -2.28
TIMP1P01033 RNU6-514P-201ENST00000384208 107 ntBASIC0.83□□□□□ -2.28
TIMP1P01033 MIR802-201ENST00000390235 94 ntBASIC0.83□□□□□ -2.28
TIMP1P01033 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.83□□□□□ -2.28
TIMP1P01033 RNA5SP193-201ENST00000410353 107 ntBASIC0.83□□□□□ -2.28
TIMP1P01033 Y_RNA.637-201ENST00000459424 114 ntBASIC0.83□□□□□ -2.28
TIMP1P01033 SNORD79.1-201ENST00000516069 84 ntBASIC0.83□□□□□ -2.28
TIMP1P01033 RNU7-43P-201ENST00000516554 64 ntBASIC0.83□□□□□ -2.28
TIMP1P01033 RNU6-1153P-201ENST00000516760 105 ntBASIC0.83□□□□□ -2.28
TIMP1P01033 SNORA18.7-201ENST00000516910 131 ntBASIC0.83□□□□□ -2.28
TIMP1P01033 MIR4661-201ENST00000582720 75 ntBASIC0.83□□□□□ -2.28
TIMP1P01033 AC008507.4-201ENST00000585464 127 ntBASIC0.83□□□□□ -2.28
TIMP1P01033 PRELID3BP2-201ENST00000605362 201 ntBASIC0.83□□□□□ -2.28
TIMP1P01033 AL391903.3-201ENST00000612158 163 ntBASIC0.83□□□□□ -2.28
TIMP1P01033 AC013791.1-201ENST00000616619 62 ntBASIC0.83□□□□□ -2.28
TIMP1P01033 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
TIMP1P01033 Y_RNA.251-201ENST00000364551 99 ntBASIC0.82□□□□□ -2.28
TIMP1P01033 Y_RNA.258-201ENST00000364613 105 ntBASIC0.82□□□□□ -2.28
TIMP1P01033 Y_RNA.363-201ENST00000365529 113 ntBASIC0.82□□□□□ -2.28
TIMP1P01033 Y_RNA.422-201ENST00000384054 114 ntBASIC0.82□□□□□ -2.28
TIMP1P01033 SNORD38C-201ENST00000384381 69 ntBASIC0.82□□□□□ -2.28
TIMP1P01033 MIR520C-201ENST00000385005 87 ntBASIC0.82□□□□□ -2.28
TIMP1P01033 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.82□□□□□ -2.28
TIMP1P01033 MIR1278-201ENST00000408753 81 ntBASIC0.82□□□□□ -2.28
TIMP1P01033 SNRPGP14-201ENST00000435400 219 ntBASIC0.82□□□□□ -2.28
TIMP1P01033 AC245047.8-201ENST00000456455 284 ntBASIC0.82□□□□□ -2.28
TIMP1P01033 SNORD11-201ENST00000459124 84 ntBASIC0.82□□□□□ -2.28
TIMP1P01033 SNORD123-201ENST00000459473 70 ntBASIC0.82□□□□□ -2.28
TIMP1P01033 SNORA27.4-201ENST00000516650 95 ntBASIC0.82□□□□□ -2.28
TIMP1P01033 MIR4711-201ENST00000578274 70 ntBASIC0.82□□□□□ -2.28
TIMP1P01033 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.82□□□□□ -2.28
TIMP1P01033 MIR3192-201ENST00000584920 77 ntBASIC0.82□□□□□ -2.28
TIMP1P01033 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.82□□□□□ -2.28
TIMP1P01033 MIR6866-201ENST00000638146 69 ntBASIC0.82□□□□□ -2.28
TIMP1P01033 RNU6-1272P-201ENST00000362776 107 ntBASIC0.81□□□□□ -2.28
TIMP1P01033 Y_RNA.84-201ENST00000363011 104 ntBASIC0.81□□□□□ -2.28
TIMP1P01033 Y_RNA.178-201ENST00000363832 102 ntBASIC0.81□□□□□ -2.28
TIMP1P01033 SNORA80D-201ENST00000384488 135 ntBASIC0.81□□□□□ -2.28
TIMP1P01033 MIR19B1-201ENST00000384829 87 ntBASIC0.81□□□□□ -2.28
TIMP1P01033 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.81□□□□□ -2.28
TIMP1P01033 snoU13.25-201ENST00000458945 104 ntBASIC0.81□□□□□ -2.28
TIMP1P01033 AC091959.1-201ENST00000495857 238 ntBASIC0.81□□□□□ -2.28
TIMP1P01033 RNU6-830P-201ENST00000516353 107 ntBASIC0.81□□□□□ -2.28
TIMP1P01033 Y_RNA.681-201ENST00000516445 113 ntBASIC0.81□□□□□ -2.28
TIMP1P01033 MIR5692C2-201ENST00000577959 77 ntBASIC0.81□□□□□ -2.28
TIMP1P01033 MIR4764-201ENST00000580680 88 ntBASIC0.81□□□□□ -2.28
TIMP1P01033 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
TIMP1P01033 RNU6-268P-201ENST00000364174 107 ntBASIC0.8□□□□□ -2.28
TIMP1P01033 Y_RNA.217-201ENST00000364214 105 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 189.3 ms