Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RNU4-58P-201ENST00000363192 141 ntBASIC-1.72□□□□□ -2.68
SCN11AQ9UI33 RNA5SP403-201ENST00000363598 108 ntBASIC-1.72□□□□□ -2.68
SCN11AQ9UI33 RNU6-560P-201ENST00000364007 108 ntBASIC-1.72□□□□□ -2.68
SCN11AQ9UI33 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.72□□□□□ -2.68
SCN11AQ9UI33 AL031667.1-201ENST00000440222 725 ntBASIC-1.72□□□□□ -2.68
SCN11AQ9UI33 AL158053.1-201ENST00000441503 453 ntBASIC-1.72□□□□□ -2.68
SCN11AQ9UI33 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.72□□□□□ -2.68
SCN11AQ9UI33 SNORA40.17-201ENST00000517256 115 ntBASIC-1.72□□□□□ -2.68
SCN11AQ9UI33 AC100767.1-201ENST00000528178 123 ntBASIC-1.72□□□□□ -2.68
SCN11AQ9UI33 MIR3118-1-201ENST00000581787 76 ntBASIC-1.72□□□□□ -2.68
SCN11AQ9UI33 RNU6-949P-201ENST00000384040 107 ntBASIC-1.72□□□□□ -2.69
SCN11AQ9UI33 SNORD12C-201ENST00000386307 89 ntBASIC-1.72□□□□□ -2.69
SCN11AQ9UI33 RPL30P16-201ENST00000419341 429 ntBASIC-1.72□□□□□ -2.69
SCN11AQ9UI33 AC107027.2-201ENST00000512197 115 ntBASIC-1.72□□□□□ -2.69
SCN11AQ9UI33 RNU6-1003P-201ENST00000517099 105 ntBASIC-1.72□□□□□ -2.69
SCN11AQ9UI33 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.72□□□□□ -2.69
SCN11AQ9UI33 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.73□□□□□ -2.69
SCN11AQ9UI33 SNORD56.2-201ENST00000363242 71 ntBASIC-1.73□□□□□ -2.69
SCN11AQ9UI33 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.73□□□□□ -2.69
SCN11AQ9UI33 SNORD14E-201ENST00000364009 85 ntBASIC-1.73□□□□□ -2.69
SCN11AQ9UI33 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.73□□□□□ -2.69
SCN11AQ9UI33 RNU6-973P-201ENST00000364690 107 ntBASIC-1.73□□□□□ -2.69
SCN11AQ9UI33 MIR558-201ENST00000384920 94 ntBASIC-1.73□□□□□ -2.69
SCN11AQ9UI33 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.73□□□□□ -2.69
SCN11AQ9UI33 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.73□□□□□ -2.69
SCN11AQ9UI33 AC024405.2-202ENST00000532731 184 ntBASIC-1.73□□□□□ -2.69
SCN11AQ9UI33 AC145350.1-201ENST00000567426 208 ntBASIC-1.73□□□□□ -2.69
SCN11AQ9UI33 AC005828.6-201ENST00000606610 232 ntBASIC-1.73□□□□□ -2.69
SCN11AQ9UI33 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.74□□□□□ -2.69
SCN11AQ9UI33 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.74□□□□□ -2.69
SCN11AQ9UI33 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.74□□□□□ -2.69
SCN11AQ9UI33 RNU2-8P-201ENST00000410727 190 ntBASIC-1.74□□□□□ -2.69
SCN11AQ9UI33 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.74□□□□□ -2.69
SCN11AQ9UI33 Y_RNA.192-201ENST00000363977 102 ntBASIC-1.75□□□□□ -2.69
SCN11AQ9UI33 SNORA40.5-201ENST00000391061 128 ntBASIC-1.75□□□□□ -2.69
SCN11AQ9UI33 RNU2-9P-201ENST00000410194 145 ntBASIC-1.75□□□□□ -2.69
SCN11AQ9UI33 MTND1P27-201ENST00000451117 902 ntBASIC-1.75□□□□□ -2.69
SCN11AQ9UI33 MTND1P12-201ENST00000455231 147 ntBASIC-1.75□□□□□ -2.69
SCN11AQ9UI33 AC018710.1-201ENST00000506509 158 ntBASIC-1.75□□□□□ -2.69
SCN11AQ9UI33 AC123904.2-201ENST00000548059 300 ntBASIC-1.75□□□□□ -2.69
SCN11AQ9UI33 AC018714.1-201ENST00000605028 208 ntBASIC-1.75□□□□□ -2.69
SCN11AQ9UI33 RMST_3.1-201ENST00000611651 109 ntBASIC-1.75□□□□□ -2.69
SCN11AQ9UI33 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.75□□□□□ -2.69
SCN11AQ9UI33 RNU6-727P-201ENST00000363592 107 ntBASIC-1.75□□□□□ -2.69
SCN11AQ9UI33 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.75□□□□□ -2.69
SCN11AQ9UI33 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.75□□□□□ -2.69
SCN11AQ9UI33 Y_RNA.576-201ENST00000384781 102 ntBASIC-1.75□□□□□ -2.69
SCN11AQ9UI33 RNU6-370P-201ENST00000411008 104 ntBASIC-1.75□□□□□ -2.69
SCN11AQ9UI33 AC244090.1-201ENST00000441884 93 ntBASIC-1.75□□□□□ -2.69
SCN11AQ9UI33 YWHAEP3-201ENST00000582767 121 ntBASIC-1.75□□□□□ -2.69
SCN11AQ9UI33 AC022418.1-201ENST00000624118 445 ntBASIC-1.75□□□□□ -2.69
SCN11AQ9UI33 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.76□□□□□ -2.69
SCN11AQ9UI33 RNU6-107P-201ENST00000516643 102 ntBASIC-1.76□□□□□ -2.69
SCN11AQ9UI33 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-1.76□□□□□ -2.69
SCN11AQ9UI33 YWHAEP2-201ENST00000580066 112 ntBASIC-1.76□□□□□ -2.69
SCN11AQ9UI33 MIR8068-201ENST00000618032 68 ntBASIC-1.76□□□□□ -2.69
SCN11AQ9UI33 U6.115-201ENST00000636045 103 ntBASIC-1.76□□□□□ -2.69
SCN11AQ9UI33 SNORA63.5-201ENST00000363548 123 ntBASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 RNU4-92P-201ENST00000363783 136 ntBASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 RNU6-434P-201ENST00000384376 107 ntBASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 MIR548A2-201ENST00000384956 97 ntBASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 MIR8485-201ENST00000401372 91 ntBASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 RNU7-104P-201ENST00000459398 79 ntBASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 AC069113.1-201ENST00000517763 267 ntBASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 AC091144.1-201ENST00000519573 138 ntBASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 AC109347.2-201ENST00000610220 349 ntBASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 uc_338.11-201ENST00000619132 160 ntBASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 MIR16-2-201ENST00000362117 81 ntBASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 RNU6-449P-201ENST00000383914 107 ntBASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 RNU6-576P-201ENST00000390854 102 ntBASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 AC093423.1-201ENST00000440817 142 ntBASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 RPL30P10-201ENST00000488148 337 ntBASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 AC124312.5-201ENST00000604451 268 ntBASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 MIR6129-201ENST00000616087 109 ntBASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 AP001282.2-201ENST00000616149 309 ntBASIC-1.77□□□□□ -2.69
SCN11AQ9UI33 SNORD115-34-201ENST00000362441 82 ntBASIC-1.78□□□□□ -2.69
SCN11AQ9UI33 SNORD115-12-201ENST00000362583 82 ntBASIC-1.78□□□□□ -2.69
SCN11AQ9UI33 SNORD115-29-201ENST00000362834 82 ntBASIC-1.78□□□□□ -2.69
SCN11AQ9UI33 SNORD115-9-201ENST00000362912 82 ntBASIC-1.78□□□□□ -2.69
SCN11AQ9UI33 SNORD115-21-201ENST00000362963 81 ntBASIC-1.78□□□□□ -2.69
SCN11AQ9UI33 SNORD115-14-201ENST00000363090 81 ntBASIC-1.78□□□□□ -2.69
SCN11AQ9UI33 SNORD115-13-201ENST00000363358 82 ntBASIC-1.78□□□□□ -2.69
SCN11AQ9UI33 SNORD115-11-201ENST00000363616 82 ntBASIC-1.78□□□□□ -2.69
SCN11AQ9UI33 SNORD115-5-201ENST00000363633 82 ntBASIC-1.78□□□□□ -2.69
SCN11AQ9UI33 SNORD115-39-201ENST00000363694 82 ntBASIC-1.78□□□□□ -2.69
SCN11AQ9UI33 SNORD115-4-201ENST00000363810 82 ntBASIC-1.78□□□□□ -2.69
SCN11AQ9UI33 SNORD115-16-201ENST00000363887 82 ntBASIC-1.78□□□□□ -2.69
SCN11AQ9UI33 SNORD115-6-201ENST00000363942 82 ntBASIC-1.78□□□□□ -2.69
SCN11AQ9UI33 SNORD115-15-201ENST00000364809 81 ntBASIC-1.78□□□□□ -2.69
SCN11AQ9UI33 SNORD115-1-201ENST00000364961 82 ntBASIC-1.78□□□□□ -2.69
SCN11AQ9UI33 SNORD115-26-201ENST00000365067 82 ntBASIC-1.78□□□□□ -2.69
SCN11AQ9UI33 SNORD115-10-201ENST00000365073 81 ntBASIC-1.78□□□□□ -2.69
SCN11AQ9UI33 SNORD115-43-201ENST00000365503 82 ntBASIC-1.78□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 247.1 ms