Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RNU6-268P-201ENST00000364174 107 ntBASIC0.18□□□□□ -2.38
TREX1Q9NSU2 RNU4-67P-201ENST00000364569 141 ntBASIC0.18□□□□□ -2.38
TREX1Q9NSU2 RNY3P4-201ENST00000384428 101 ntBASIC0.18□□□□□ -2.38
TREX1Q9NSU2 Y_RNA.537-201ENST00000384626 109 ntBASIC0.18□□□□□ -2.38
TREX1Q9NSU2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.18□□□□□ -2.38
TREX1Q9NSU2 HMGN1P33-201ENST00000432945 451 ntBASIC0.18□□□□□ -2.38
TREX1Q9NSU2 SCARNA8-201ENST00000515924 131 ntBASIC0.18□□□□□ -2.38
TREX1Q9NSU2 SNORA25.12-201ENST00000516202 82 ntBASIC0.18□□□□□ -2.38
TREX1Q9NSU2 RNU7-4P-201ENST00000516961 62 ntBASIC0.18□□□□□ -2.38
TREX1Q9NSU2 AC087685.1-201ENST00000587507 141 ntBASIC0.18□□□□□ -2.38
TREX1Q9NSU2 SNORA1.2-201ENST00000365189 134 ntBASIC0.17□□□□□ -2.38
TREX1Q9NSU2 RNU4-45P-201ENST00000365469 141 ntBASIC0.17□□□□□ -2.38
TREX1Q9NSU2 MIR628-201ENST00000385229 95 ntBASIC0.17□□□□□ -2.38
TREX1Q9NSU2 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
TREX1Q9NSU2 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.17□□□□□ -2.38
TREX1Q9NSU2 MIR548F1-201ENST00000408667 84 ntBASIC0.17□□□□□ -2.38
TREX1Q9NSU2 MTND1P2-201ENST00000430604 821 ntBASIC0.17□□□□□ -2.38
TREX1Q9NSU2 AC024405.2-202ENST00000532731 184 ntBASIC0.17□□□□□ -2.38
TREX1Q9NSU2 MIR4514-201ENST00000581410 57 ntBASIC0.17□□□□□ -2.38
TREX1Q9NSU2 AC022441.3-201ENST00000605737 136 ntBASIC0.17□□□□□ -2.38
TREX1Q9NSU2 AC002553.4-201ENST00000616896 331 ntBASIC0.17□□□□□ -2.38
TREX1Q9NSU2 MIR103A1-201ENST00000362165 78 ntBASIC0.16□□□□□ -2.38
TREX1Q9NSU2 Y_RNA.230-201ENST00000364348 109 ntBASIC0.16□□□□□ -2.38
TREX1Q9NSU2 RNU6-580P-201ENST00000365159 107 ntBASIC0.16□□□□□ -2.38
TREX1Q9NSU2 MT-TN-201ENST00000387400 73 ntBASIC0.16□□□□□ -2.38
TREX1Q9NSU2 RNA5SP299-201ENST00000391203 116 ntBASIC0.16□□□□□ -2.38
TREX1Q9NSU2 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.16□□□□□ -2.38
TREX1Q9NSU2 RNU7-30P-201ENST00000516835 62 ntBASIC0.16□□□□□ -2.38
TREX1Q9NSU2 RN7SKP295-201ENST00000517264 153 ntBASIC0.16□□□□□ -2.38
TREX1Q9NSU2 MIR4804-201ENST00000581683 73 ntBASIC0.16□□□□□ -2.38
TREX1Q9NSU2 RBM11P1-201ENST00000604951 799 ntBASIC0.16□□□□□ -2.38
TREX1Q9NSU2 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.16□□□□□ -2.38
TREX1Q9NSU2 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
TREX1Q9NSU2 MIR377-201ENST00000362145 69 ntBASIC0.15□□□□□ -2.39
TREX1Q9NSU2 Y_RNA.68-201ENST00000362881 102 ntBASIC0.15□□□□□ -2.39
TREX1Q9NSU2 RNU6-623P-201ENST00000363143 105 ntBASIC0.15□□□□□ -2.39
TREX1Q9NSU2 U8.7-201ENST00000364940 136 ntBASIC0.15□□□□□ -2.39
TREX1Q9NSU2 Y_RNA.310-201ENST00000365063 113 ntBASIC0.15□□□□□ -2.39
TREX1Q9NSU2 RNU6-1175P-201ENST00000365200 107 ntBASIC0.15□□□□□ -2.39
TREX1Q9NSU2 AL590004.1-201ENST00000405321 300 ntBASIC0.15□□□□□ -2.39
TREX1Q9NSU2 MIR1277-201ENST00000408536 78 ntBASIC0.15□□□□□ -2.39
TREX1Q9NSU2 RNU6-847P-201ENST00000411115 108 ntBASIC0.15□□□□□ -2.39
TREX1Q9NSU2 SNORD71-201ENST00000411292 86 ntBASIC0.15□□□□□ -2.39
TREX1Q9NSU2 SNRPGP14-201ENST00000435400 219 ntBASIC0.15□□□□□ -2.39
TREX1Q9NSU2 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.15□□□□□ -2.39
TREX1Q9NSU2 MIR4676-201ENST00000583078 72 ntBASIC0.15□□□□□ -2.39
TREX1Q9NSU2 AP003357.1-201ENST00000604497 148 ntBASIC0.15□□□□□ -2.39
TREX1Q9NSU2 uc_338.4-201ENST00000616635 176 ntBASIC0.15□□□□□ -2.39
TREX1Q9NSU2 Y_RNA.30-201ENST00000362572 97 ntBASIC0.14□□□□□ -2.39
TREX1Q9NSU2 Y_RNA.314-201ENST00000365114 102 ntBASIC0.14□□□□□ -2.39
TREX1Q9NSU2 Y_RNA.456-201ENST00000384232 111 ntBASIC0.14□□□□□ -2.39
TREX1Q9NSU2 RNU6-1215P-201ENST00000384441 102 ntBASIC0.14□□□□□ -2.39
TREX1Q9NSU2 RNU6-125P-201ENST00000384505 107 ntBASIC0.14□□□□□ -2.39
TREX1Q9NSU2 Y_RNA.646-201ENST00000410980 101 ntBASIC0.14□□□□□ -2.39
TREX1Q9NSU2 AC024067.1-201ENST00000426199 223 ntBASIC0.14□□□□□ -2.39
TREX1Q9NSU2 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.14□□□□□ -2.39
TREX1Q9NSU2 AC005042.3-201ENST00000453230 174 ntBASIC0.14□□□□□ -2.39
TREX1Q9NSU2 AC108740.1-201ENST00000498629 225 ntBASIC0.14□□□□□ -2.39
TREX1Q9NSU2 RNU4-77P-201ENST00000516692 156 ntBASIC0.14□□□□□ -2.39
TREX1Q9NSU2 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.14□□□□□ -2.39
TREX1Q9NSU2 MIR4264-201ENST00000583520 66 ntBASIC0.14□□□□□ -2.39
TREX1Q9NSU2 LARP7P1-201ENST00000605576 316 ntBASIC0.14□□□□□ -2.39
TREX1Q9NSU2 MIR6718-201ENST00000616153 80 ntBASIC0.14□□□□□ -2.39
TREX1Q9NSU2 RNA5SP62-201ENST00000363457 110 ntBASIC0.13□□□□□ -2.39
TREX1Q9NSU2 RNU6-708P-201ENST00000384217 107 ntBASIC0.13□□□□□ -2.39
TREX1Q9NSU2 SNORA75.6-201ENST00000391318 127 ntBASIC0.13□□□□□ -2.39
TREX1Q9NSU2 MIR1278-201ENST00000408753 81 ntBASIC0.13□□□□□ -2.39
TREX1Q9NSU2 RNU4-14P-201ENST00000410858 122 ntBASIC0.13□□□□□ -2.39
TREX1Q9NSU2 RNU6-370P-201ENST00000411008 104 ntBASIC0.13□□□□□ -2.39
TREX1Q9NSU2 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.13□□□□□ -2.39
TREX1Q9NSU2 AL589823.1-201ENST00000429577 183 ntBASIC0.13□□□□□ -2.39
TREX1Q9NSU2 SNRPGP12-201ENST00000449481 213 ntBASIC0.13□□□□□ -2.39
TREX1Q9NSU2 MTND4P17-201ENST00000470444 350 ntBASIC0.13□□□□□ -2.39
TREX1Q9NSU2 AC022523.2-201ENST00000561045 150 ntBASIC0.13□□□□□ -2.39
TREX1Q9NSU2 AC127455.1-201ENST00000565496 145 ntBASIC0.13□□□□□ -2.39
TREX1Q9NSU2 RPL23AP91-201ENST00000569211 455 ntBASIC0.13□□□□□ -2.39
TREX1Q9NSU2 MIR2681-201ENST00000581814 105 ntBASIC0.13□□□□□ -2.39
TREX1Q9NSU2 MIR4768-201ENST00000585270 74 ntBASIC0.13□□□□□ -2.39
TREX1Q9NSU2 AC008507.4-201ENST00000585464 127 ntBASIC0.13□□□□□ -2.39
TREX1Q9NSU2 DEFB117-201ENST00000602356 141 ntBASIC0.13□□□□□ -2.39
TREX1Q9NSU2 AC020891.4-201ENST00000605745 93 ntBASIC0.13□□□□□ -2.39
TREX1Q9NSU2 AC080013.6-201ENST00000606185 215 ntBASIC0.13□□□□□ -2.39
TREX1Q9NSU2 U2.1-201ENST00000618978 145 ntBASIC0.13□□□□□ -2.39
TREX1Q9NSU2 TPTEP1-208ENST00000636884 213 ntBASIC0.13□□□□□ -2.39
TREX1Q9NSU2 SNORD44.1-201ENST00000363202 61 ntBASIC0.12□□□□□ -2.39
TREX1Q9NSU2 RNA5SP517-201ENST00000364724 117 ntBASIC0.12□□□□□ -2.39
TREX1Q9NSU2 Y_RNA.280-201ENST00000364765 112 ntBASIC0.12□□□□□ -2.39
TREX1Q9NSU2 RNU6-310P-201ENST00000384655 107 ntBASIC0.12□□□□□ -2.39
TREX1Q9NSU2 MIR518A1-201ENST00000385068 85 ntBASIC0.12□□□□□ -2.39
TREX1Q9NSU2 SNORD72-201ENST00000390994 80 ntBASIC0.12□□□□□ -2.39
TREX1Q9NSU2 SNORA40.8-201ENST00000411034 126 ntBASIC0.12□□□□□ -2.39
TREX1Q9NSU2 AC096644.2-201ENST00000429278 159 ntBASIC0.12□□□□□ -2.39
TREX1Q9NSU2 RNU7-56P-201ENST00000458744 62 ntBASIC0.12□□□□□ -2.39
TREX1Q9NSU2 RNU7-62P-201ENST00000458856 62 ntBASIC0.12□□□□□ -2.39
TREX1Q9NSU2 Y_RNA.635-201ENST00000459041 101 ntBASIC0.12□□□□□ -2.39
TREX1Q9NSU2 RNU7-115P-201ENST00000516433 55 ntBASIC0.12□□□□□ -2.39
TREX1Q9NSU2 RNU6-1007P-201ENST00000516586 107 ntBASIC0.12□□□□□ -2.39
TREX1Q9NSU2 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.12□□□□□ -2.39
TREX1Q9NSU2 MIR5188-201ENST00000583467 113 ntBASIC0.12□□□□□ -2.39
TREX1Q9NSU2 MIR5690-201ENST00000583739 73 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 208 ms