Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 Y_RNA.122-201ENST00000363331 96 ntBASIC0.13□□□□□ -2.39
LRRC40Q9H9A6 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.13□□□□□ -2.39
LRRC40Q9H9A6 AC024067.1-201ENST00000426199 223 ntBASIC0.13□□□□□ -2.39
LRRC40Q9H9A6 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.13□□□□□ -2.39
LRRC40Q9H9A6 RNU7-30P-201ENST00000516835 62 ntBASIC0.13□□□□□ -2.39
LRRC40Q9H9A6 TPTEP1-208ENST00000636884 213 ntBASIC0.13□□□□□ -2.39
LRRC40Q9H9A6 MIR628-201ENST00000385229 95 ntBASIC0.12□□□□□ -2.39
LRRC40Q9H9A6 SNORA75.6-201ENST00000391318 127 ntBASIC0.12□□□□□ -2.39
LRRC40Q9H9A6 MIR938-201ENST00000401216 83 ntBASIC0.12□□□□□ -2.39
LRRC40Q9H9A6 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
LRRC40Q9H9A6 MIR548F1-201ENST00000408667 84 ntBASIC0.12□□□□□ -2.39
LRRC40Q9H9A6 RNU2-13P-201ENST00000515909 113 ntBASIC0.12□□□□□ -2.39
LRRC40Q9H9A6 RNU6-1007P-201ENST00000516586 107 ntBASIC0.12□□□□□ -2.39
LRRC40Q9H9A6 AC006441.5-201ENST00000612680 209 ntBASIC0.12□□□□□ -2.39
LRRC40Q9H9A6 MIR548AY-201ENST00000617669 107 ntBASIC0.12□□□□□ -2.39
LRRC40Q9H9A6 MIR6515-201ENST00000619843 57 ntBASIC0.12□□□□□ -2.39
LRRC40Q9H9A6 SNORD114-23-201ENST00000363536 72 ntBASIC0.11□□□□□ -2.39
LRRC40Q9H9A6 Y_RNA.570-201ENST00000384750 101 ntBASIC0.11□□□□□ -2.39
LRRC40Q9H9A6 SNORD72-201ENST00000390994 80 ntBASIC0.11□□□□□ -2.39
LRRC40Q9H9A6 Y_RNA.646-201ENST00000410980 101 ntBASIC0.11□□□□□ -2.39
LRRC40Q9H9A6 RNU7-62P-201ENST00000458856 62 ntBASIC0.11□□□□□ -2.39
LRRC40Q9H9A6 AC091951.2-201ENST00000500762 203 ntBASIC0.11□□□□□ -2.39
LRRC40Q9H9A6 U2.1-201ENST00000618978 145 ntBASIC0.11□□□□□ -2.39
LRRC40Q9H9A6 MIR924-201ENST00000638017 53 ntBASIC0.11□□□□□ -2.39
LRRC40Q9H9A6 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
LRRC40Q9H9A6 Y_RNA.242-201ENST00000364473 110 ntBASIC0.1□□□□□ -2.39
LRRC40Q9H9A6 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
LRRC40Q9H9A6 RNU4-14P-201ENST00000410858 122 ntBASIC0.1□□□□□ -2.39
LRRC40Q9H9A6 AF228730.4-201ENST00000421457 183 ntBASIC0.1□□□□□ -2.39
LRRC40Q9H9A6 RPL23AP91-201ENST00000569211 455 ntBASIC0.1□□□□□ -2.39
LRRC40Q9H9A6 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.1□□□□□ -2.39
LRRC40Q9H9A6 AL080274.1-201ENST00000605565 220 ntBASIC0.1□□□□□ -2.39
LRRC40Q9H9A6 uc_338.16-201ENST00000621804 95 ntBASIC0.1□□□□□ -2.39
LRRC40Q9H9A6 Y_RNA.314-201ENST00000365114 102 ntBASIC0.09□□□□□ -2.4
LRRC40Q9H9A6 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
LRRC40Q9H9A6 RNU6-708P-201ENST00000384217 107 ntBASIC0.09□□□□□ -2.4
LRRC40Q9H9A6 RNU6-310P-201ENST00000384655 107 ntBASIC0.09□□□□□ -2.4
LRRC40Q9H9A6 AL603910.2-201ENST00000407268 136 ntBASIC0.09□□□□□ -2.4
LRRC40Q9H9A6 MIR1278-201ENST00000408753 81 ntBASIC0.09□□□□□ -2.4
LRRC40Q9H9A6 RNU2-70P-201ENST00000410718 179 ntBASIC0.09□□□□□ -2.4
LRRC40Q9H9A6 AC090844.1-201ENST00000422019 156 ntBASIC0.09□□□□□ -2.4
LRRC40Q9H9A6 snoU13.16-201ENST00000459350 104 ntBASIC0.09□□□□□ -2.4
LRRC40Q9H9A6 snoU13.18-201ENST00000459483 104 ntBASIC0.09□□□□□ -2.4
LRRC40Q9H9A6 AC107297.1-201ENST00000459991 176 ntBASIC0.09□□□□□ -2.4
LRRC40Q9H9A6 RNU6-863P-201ENST00000515989 104 ntBASIC0.09□□□□□ -2.4
LRRC40Q9H9A6 RNA5SP94-201ENST00000516917 108 ntBASIC0.09□□□□□ -2.4
LRRC40Q9H9A6 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.09□□□□□ -2.4
LRRC40Q9H9A6 MIR5690-201ENST00000583739 73 ntBASIC0.09□□□□□ -2.4
LRRC40Q9H9A6 DEFB117-201ENST00000602356 141 ntBASIC0.09□□□□□ -2.4
LRRC40Q9H9A6 AC098679.4-201ENST00000624241 654 ntBASIC0.09□□□□□ -2.4
LRRC40Q9H9A6 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.09□□□□□ -2.4
LRRC40Q9H9A6 U6.92-201ENST00000636464 89 ntBASIC0.09□□□□□ -2.4
LRRC40Q9H9A6 Y_RNA.27-201ENST00000362540 103 ntBASIC0.08□□□□□ -2.4
LRRC40Q9H9A6 Y_RNA.331-201ENST00000365267 102 ntBASIC0.08□□□□□ -2.4
LRRC40Q9H9A6 RNU6-1215P-201ENST00000384441 102 ntBASIC0.08□□□□□ -2.4
LRRC40Q9H9A6 MIR598-201ENST00000384868 97 ntBASIC0.08□□□□□ -2.4
LRRC40Q9H9A6 SNORD100-201ENST00000408573 76 ntBASIC0.08□□□□□ -2.4
LRRC40Q9H9A6 RNU6-370P-201ENST00000411008 104 ntBASIC0.08□□□□□ -2.4
LRRC40Q9H9A6 Y_RNA.635-201ENST00000459041 101 ntBASIC0.08□□□□□ -2.4
LRRC40Q9H9A6 RNU6-437P-201ENST00000459408 95 ntBASIC0.08□□□□□ -2.4
LRRC40Q9H9A6 AL355297.3-201ENST00000604082 446 ntBASIC0.08□□□□□ -2.4
LRRC40Q9H9A6 AC080013.6-201ENST00000606185 215 ntBASIC0.08□□□□□ -2.4
LRRC40Q9H9A6 SNORA25.18-201ENST00000607153 114 ntBASIC0.08□□□□□ -2.4
LRRC40Q9H9A6 AC078938.1-201ENST00000620993 318 ntBASIC0.08□□□□□ -2.4
LRRC40Q9H9A6 AC010487.4-201ENST00000637027 61 ntBASIC0.08□□□□□ -2.4
LRRC40Q9H9A6 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
LRRC40Q9H9A6 SNORA63C-201ENST00000364578 129 ntBASIC0.07□□□□□ -2.4
LRRC40Q9H9A6 RNU6-890P-201ENST00000384121 107 ntBASIC0.07□□□□□ -2.4
LRRC40Q9H9A6 RNU6-364P-201ENST00000384387 107 ntBASIC0.07□□□□□ -2.4
LRRC40Q9H9A6 BTF3P11-201ENST00000426582 477 ntBASIC0.07□□□□□ -2.4
LRRC40Q9H9A6 AC236972.2-201ENST00000434979 310 ntBASIC0.07□□□□□ -2.4
LRRC40Q9H9A6 MTND4P17-201ENST00000470444 350 ntBASIC0.07□□□□□ -2.4
LRRC40Q9H9A6 SNORA18.4-201ENST00000516440 124 ntBASIC0.07□□□□□ -2.4
LRRC40Q9H9A6 RNU6-911P-201ENST00000516523 104 ntBASIC0.07□□□□□ -2.4
LRRC40Q9H9A6 SNORA62.5-201ENST00000516634 120 ntBASIC0.07□□□□□ -2.4
LRRC40Q9H9A6 AC090897.1-201ENST00000580909 226 ntBASIC0.07□□□□□ -2.4
LRRC40Q9H9A6 RNU6-1188P-201ENST00000363795 107 ntBASIC0.06□□□□□ -2.4
LRRC40Q9H9A6 RNU6-1319P-201ENST00000390855 104 ntBASIC0.06□□□□□ -2.4
LRRC40Q9H9A6 RNU6-747P-201ENST00000390928 104 ntBASIC0.06□□□□□ -2.4
LRRC40Q9H9A6 RNU6-241P-201ENST00000391148 104 ntBASIC0.06□□□□□ -2.4
LRRC40Q9H9A6 RNU6-447P-201ENST00000410293 104 ntBASIC0.06□□□□□ -2.4
LRRC40Q9H9A6 RNU6-1118P-201ENST00000410382 104 ntBASIC0.06□□□□□ -2.4
LRRC40Q9H9A6 RNU6-1076P-201ENST00000410397 104 ntBASIC0.06□□□□□ -2.4
LRRC40Q9H9A6 RNU6-355P-201ENST00000410427 104 ntBASIC0.06□□□□□ -2.4
LRRC40Q9H9A6 SNORA36B-201ENST00000410438 131 ntBASIC0.06□□□□□ -2.4
LRRC40Q9H9A6 RNU6-791P-201ENST00000410467 104 ntBASIC0.06□□□□□ -2.4
LRRC40Q9H9A6 Y_RNA.599-201ENST00000410489 109 ntBASIC0.06□□□□□ -2.4
LRRC40Q9H9A6 RNU6-705P-201ENST00000410601 104 ntBASIC0.06□□□□□ -2.4
LRRC40Q9H9A6 RNU6-1100P-201ENST00000410691 104 ntBASIC0.06□□□□□ -2.4
LRRC40Q9H9A6 RNU6-860P-201ENST00000410860 104 ntBASIC0.06□□□□□ -2.4
LRRC40Q9H9A6 RNU6-1217P-201ENST00000411276 104 ntBASIC0.06□□□□□ -2.4
LRRC40Q9H9A6 RNU6-785P-201ENST00000411324 104 ntBASIC0.06□□□□□ -2.4
LRRC40Q9H9A6 AC073261.1-201ENST00000429409 121 ntBASIC0.06□□□□□ -2.4
LRRC40Q9H9A6 RNU7-67P-201ENST00000459003 62 ntBASIC0.06□□□□□ -2.4
LRRC40Q9H9A6 AC069439.1-201ENST00000494739 167 ntBASIC0.06□□□□□ -2.4
LRRC40Q9H9A6 U6.90-201ENST00000614007 104 ntBASIC0.06□□□□□ -2.4
LRRC40Q9H9A6 AC134878.1-201ENST00000619901 243 ntBASIC0.06□□□□□ -2.4
LRRC40Q9H9A6 U6.70-201ENST00000620287 104 ntBASIC0.06□□□□□ -2.4
LRRC40Q9H9A6 MIR4315-1-201ENST00000636800 73 ntBASIC0.06□□□□□ -2.4
LRRC40Q9H9A6 MIR4315-2-201ENST00000640925 73 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 198.3 ms