Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 RNU6-1116P-201ENST00000517269 99 ntBASIC1.53□□□□□ -2.16
USP44Q9H0E7 AC090049.2-201ENST00000550377 109 ntBASIC1.53□□□□□ -2.16
USP44Q9H0E7 MIR5692C2-201ENST00000577959 77 ntBASIC1.53□□□□□ -2.16
USP44Q9H0E7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.53□□□□□ -2.16
USP44Q9H0E7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
USP44Q9H0E7 Y_RNA.164-201ENST00000363709 102 ntBASIC1.52□□□□□ -2.17
USP44Q9H0E7 Y_RNA.238-201ENST00000364441 102 ntBASIC1.52□□□□□ -2.17
USP44Q9H0E7 RNU6-196P-201ENST00000384315 107 ntBASIC1.52□□□□□ -2.17
USP44Q9H0E7 MIR522-201ENST00000385071 87 ntBASIC1.52□□□□□ -2.17
USP44Q9H0E7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.52□□□□□ -2.17
USP44Q9H0E7 AC120024.3-201ENST00000603167 156 ntBASIC1.52□□□□□ -2.17
USP44Q9H0E7 AL357312.1-201ENST00000603879 298 ntBASIC1.52□□□□□ -2.17
USP44Q9H0E7 U4.1-201ENST00000620349 87 ntBASIC1.52□□□□□ -2.17
USP44Q9H0E7 Y_RNA.14-201ENST00000362415 103 ntBASIC1.51□□□□□ -2.17
USP44Q9H0E7 RNU6-1205P-201ENST00000363625 106 ntBASIC1.51□□□□□ -2.17
USP44Q9H0E7 RNU6-674P-201ENST00000363831 107 ntBASIC1.51□□□□□ -2.17
USP44Q9H0E7 Y_RNA.796-201ENST00000364268 102 ntBASIC1.51□□□□□ -2.17
USP44Q9H0E7 Y_RNA.799-201ENST00000364992 102 ntBASIC1.51□□□□□ -2.17
USP44Q9H0E7 RNU6-144P-201ENST00000383951 107 ntBASIC1.51□□□□□ -2.17
USP44Q9H0E7 RNU6-163P-201ENST00000384396 106 ntBASIC1.51□□□□□ -2.17
USP44Q9H0E7 Y_RNA.562-201ENST00000384695 113 ntBASIC1.51□□□□□ -2.17
USP44Q9H0E7 snosnR66.1-201ENST00000391095 99 ntBASIC1.51□□□□□ -2.17
USP44Q9H0E7 AL603910.2-201ENST00000407268 136 ntBASIC1.51□□□□□ -2.17
USP44Q9H0E7 MIR1278-201ENST00000408753 81 ntBASIC1.51□□□□□ -2.17
USP44Q9H0E7 SNRPGP10-201ENST00000432323 225 ntBASIC1.51□□□□□ -2.17
USP44Q9H0E7 HMGN2P32-201ENST00000444648 269 ntBASIC1.51□□□□□ -2.17
USP44Q9H0E7 AC093850.1-201ENST00000454121 251 ntBASIC1.51□□□□□ -2.17
USP44Q9H0E7 RNU6-1132P-201ENST00000459214 107 ntBASIC1.51□□□□□ -2.17
USP44Q9H0E7 AC090821.2-201ENST00000523552 176 ntBASIC1.51□□□□□ -2.17
USP44Q9H0E7 MIR4643-201ENST00000577473 78 ntBASIC1.51□□□□□ -2.17
USP44Q9H0E7 MIR4778-201ENST00000577635 80 ntBASIC1.51□□□□□ -2.17
USP44Q9H0E7 Y_RNA.144-201ENST00000363521 113 ntBASIC1.5□□□□□ -2.17
USP44Q9H0E7 RNU6-1209P-201ENST00000363655 107 ntBASIC1.5□□□□□ -2.17
USP44Q9H0E7 RNU6-969P-201ENST00000383900 105 ntBASIC1.5□□□□□ -2.17
USP44Q9H0E7 RNU6-211P-201ENST00000384047 107 ntBASIC1.5□□□□□ -2.17
USP44Q9H0E7 RNU6-463P-201ENST00000384340 107 ntBASIC1.5□□□□□ -2.17
USP44Q9H0E7 RNA5SP247-201ENST00000411181 105 ntBASIC1.5□□□□□ -2.17
USP44Q9H0E7 MLLT10P1-201ENST00000418346 262 ntBASIC1.5□□□□□ -2.17
USP44Q9H0E7 RPS27P16-201ENST00000425758 201 ntBASIC1.5□□□□□ -2.17
USP44Q9H0E7 MIR3664-201ENST00000579074 99 ntBASIC1.5□□□□□ -2.17
USP44Q9H0E7 AL365434.2-201ENST00000607979 234 ntBASIC1.5□□□□□ -2.17
USP44Q9H0E7 7SK.10-201ENST00000621414 298 ntBASIC1.5□□□□□ -2.17
USP44Q9H0E7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
USP44Q9H0E7 Y_RNA.82-201ENST00000363000 102 ntBASIC1.49□□□□□ -2.17
USP44Q9H0E7 Y_RNA.92-201ENST00000363043 102 ntBASIC1.49□□□□□ -2.17
USP44Q9H0E7 Y_RNA.193-201ENST00000363979 102 ntBASIC1.49□□□□□ -2.17
USP44Q9H0E7 Y_RNA.235-201ENST00000364412 102 ntBASIC1.49□□□□□ -2.17
USP44Q9H0E7 Y_RNA.306-201ENST00000365015 102 ntBASIC1.49□□□□□ -2.17
USP44Q9H0E7 Y_RNA.312-201ENST00000365089 102 ntBASIC1.49□□□□□ -2.17
USP44Q9H0E7 Y_RNA.322-201ENST00000365151 102 ntBASIC1.49□□□□□ -2.17
USP44Q9H0E7 Y_RNA.352-201ENST00000365439 102 ntBASIC1.49□□□□□ -2.17
USP44Q9H0E7 Y_RNA.452-201ENST00000384202 108 ntBASIC1.49□□□□□ -2.17
USP44Q9H0E7 MIR452-201ENST00000385020 85 ntBASIC1.49□□□□□ -2.17
USP44Q9H0E7 AL451046.2-201ENST00000403074 277 ntBASIC1.49□□□□□ -2.17
USP44Q9H0E7 PIGPP3-201ENST00000425307 415 ntBASIC1.49□□□□□ -2.17
USP44Q9H0E7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.49□□□□□ -2.17
USP44Q9H0E7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.49□□□□□ -2.17
USP44Q9H0E7 Y_RNA.650-201ENST00000459002 102 ntBASIC1.49□□□□□ -2.17
USP44Q9H0E7 MTND1P19-201ENST00000511780 315 ntBASIC1.49□□□□□ -2.17
USP44Q9H0E7 Y_RNA.777-201ENST00000516982 102 ntBASIC1.49□□□□□ -2.17
USP44Q9H0E7 AC019176.1-201ENST00000518519 225 ntBASIC1.49□□□□□ -2.17
USP44Q9H0E7 AL512310.8-201ENST00000550183 120 ntBASIC1.49□□□□□ -2.17
USP44Q9H0E7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.49□□□□□ -2.17
USP44Q9H0E7 MIR3149-201ENST00000584629 83 ntBASIC1.49□□□□□ -2.17
USP44Q9H0E7 Y_RNA.771-201ENST00000598668 102 ntBASIC1.49□□□□□ -2.17
USP44Q9H0E7 GHRLOS.1-201ENST00000610995 70 ntBASIC1.49□□□□□ -2.17
USP44Q9H0E7 Y_RNA.789-201ENST00000622480 102 ntBASIC1.49□□□□□ -2.17
USP44Q9H0E7 Y_RNA.277-201ENST00000364754 102 ntBASIC1.48□□□□□ -2.17
USP44Q9H0E7 snoU2-30.1-201ENST00000365012 70 ntBASIC1.48□□□□□ -2.17
USP44Q9H0E7 Y_RNA.336-201ENST00000365307 109 ntBASIC1.48□□□□□ -2.17
USP44Q9H0E7 MIR15B-201ENST00000385045 98 ntBASIC1.48□□□□□ -2.17
USP44Q9H0E7 RNU6-131P-201ENST00000391144 107 ntBASIC1.48□□□□□ -2.17
USP44Q9H0E7 RNU6-955P-201ENST00000410497 104 ntBASIC1.48□□□□□ -2.17
USP44Q9H0E7 RNU6-383P-201ENST00000410864 94 ntBASIC1.48□□□□□ -2.17
USP44Q9H0E7 SNORD2.1-201ENST00000458762 69 ntBASIC1.48□□□□□ -2.17
USP44Q9H0E7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.48□□□□□ -2.17
USP44Q9H0E7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.48□□□□□ -2.17
USP44Q9H0E7 AC114811.1-201ENST00000507207 168 ntBASIC1.48□□□□□ -2.17
USP44Q9H0E7 MIR4282-201ENST00000583613 67 ntBASIC1.48□□□□□ -2.17
USP44Q9H0E7 AP001485.1-201ENST00000604799 199 ntBASIC1.48□□□□□ -2.17
USP44Q9H0E7 AC062037.2-201ENST00000610137 73 ntBASIC1.48□□□□□ -2.17
USP44Q9H0E7 JPX_2.1-201ENST00000614161 69 ntBASIC1.48□□□□□ -2.17
USP44Q9H0E7 Y_RNA.54-201ENST00000362766 105 ntBASIC1.47□□□□□ -2.17
USP44Q9H0E7 Y_RNA.122-201ENST00000363331 96 ntBASIC1.47□□□□□ -2.17
USP44Q9H0E7 RNU4-10P-201ENST00000364383 140 ntBASIC1.47□□□□□ -2.17
USP44Q9H0E7 Y_RNA.293-201ENST00000364908 93 ntBASIC1.47□□□□□ -2.17
USP44Q9H0E7 RNU6-702P-201ENST00000364982 107 ntBASIC1.47□□□□□ -2.17
USP44Q9H0E7 SNORD50B-201ENST00000364995 70 ntBASIC1.47□□□□□ -2.17
USP44Q9H0E7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
USP44Q9H0E7 NDUFA4P2-201ENST00000489989 244 ntBASIC1.47□□□□□ -2.17
USP44Q9H0E7 Y_RNA.680-201ENST00000516441 93 ntBASIC1.47□□□□□ -2.17
USP44Q9H0E7 RPL23AP91-201ENST00000569211 455 ntBASIC1.47□□□□□ -2.17
USP44Q9H0E7 MIR8065-201ENST00000620577 100 ntBASIC1.47□□□□□ -2.17
USP44Q9H0E7 AC106754.2-201ENST00000623006 233 ntBASIC1.47□□□□□ -2.17
USP44Q9H0E7 RNU6-1084P-201ENST00000362498 107 ntBASIC1.46□□□□□ -2.18
USP44Q9H0E7 Y_RNA.477-201ENST00000384352 108 ntBASIC1.46□□□□□ -2.18
USP44Q9H0E7 Y_RNA.590-201ENST00000410140 107 ntBASIC1.46□□□□□ -2.18
USP44Q9H0E7 SNORD11-201ENST00000459124 84 ntBASIC1.46□□□□□ -2.18
USP44Q9H0E7 AC092991.1-201ENST00000477176 376 ntBASIC1.46□□□□□ -2.18
USP44Q9H0E7 SNORD45.4-201ENST00000516629 73 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms