Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 Y_RNA.168-201ENST00000363740 102 ntBASIC0.45□□□□□ -2.34
CCDC50Q8IVM0 RNU6-1237P-201ENST00000384777 107 ntBASIC0.45□□□□□ -2.34
CCDC50Q8IVM0 RNU6-205P-201ENST00000390858 107 ntBASIC0.45□□□□□ -2.34
CCDC50Q8IVM0 RNU7-141P-201ENST00000459304 62 ntBASIC0.45□□□□□ -2.34
CCDC50Q8IVM0 SNORD116.3-201ENST00000517176 78 ntBASIC0.45□□□□□ -2.34
CCDC50Q8IVM0 AC018659.1-201ENST00000551083 169 ntBASIC0.45□□□□□ -2.34
CCDC50Q8IVM0 AC092447.9-201ENST00000603395 144 ntBASIC0.45□□□□□ -2.34
CCDC50Q8IVM0 AC104695.3-201ENST00000604052 296 ntBASIC0.45□□□□□ -2.34
CCDC50Q8IVM0 Y_RNA.772-201ENST00000606692 102 ntBASIC0.45□□□□□ -2.34
CCDC50Q8IVM0 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.45□□□□□ -2.34
CCDC50Q8IVM0 AC007742.2-201ENST00000618226 398 ntBASIC0.45□□□□□ -2.34
CCDC50Q8IVM0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.45□□□□□ -2.34
CCDC50Q8IVM0 MIR1302-1-201ENST00000637932 143 ntBASIC0.45□□□□□ -2.34
CCDC50Q8IVM0 Y_RNA.143-201ENST00000363520 106 ntBASIC0.44□□□□□ -2.34
CCDC50Q8IVM0 Y_RNA.286-201ENST00000364813 102 ntBASIC0.44□□□□□ -2.34
CCDC50Q8IVM0 RNU6-396P-201ENST00000365369 105 ntBASIC0.44□□□□□ -2.34
CCDC50Q8IVM0 Y_RNA.462-201ENST00000384268 102 ntBASIC0.44□□□□□ -2.34
CCDC50Q8IVM0 SNORA36B-201ENST00000410438 131 ntBASIC0.44□□□□□ -2.34
CCDC50Q8IVM0 AC244023.1-201ENST00000426884 112 ntBASIC0.44□□□□□ -2.34
CCDC50Q8IVM0 RNU6-437P-201ENST00000459408 95 ntBASIC0.44□□□□□ -2.34
CCDC50Q8IVM0 Y_RNA.661-201ENST00000516003 99 ntBASIC0.44□□□□□ -2.34
CCDC50Q8IVM0 RNU4-77P-201ENST00000516692 156 ntBASIC0.44□□□□□ -2.34
CCDC50Q8IVM0 MIR5000-201ENST00000577717 103 ntBASIC0.44□□□□□ -2.34
CCDC50Q8IVM0 AC087685.1-201ENST00000587507 141 ntBASIC0.44□□□□□ -2.34
CCDC50Q8IVM0 AC242498.1-201ENST00000604134 111 ntBASIC0.44□□□□□ -2.34
CCDC50Q8IVM0 AC243994.1-201ENST00000618627 109 ntBASIC0.44□□□□□ -2.34
CCDC50Q8IVM0 RNU6-1115P-201ENST00000362490 106 ntBASIC0.43□□□□□ -2.34
CCDC50Q8IVM0 RNU6-801P-201ENST00000364087 105 ntBASIC0.43□□□□□ -2.34
CCDC50Q8IVM0 RNU4-50P-201ENST00000364361 141 ntBASIC0.43□□□□□ -2.34
CCDC50Q8IVM0 Y_RNA.370-201ENST00000365589 108 ntBASIC0.43□□□□□ -2.34
CCDC50Q8IVM0 RNU6-125P-201ENST00000384505 107 ntBASIC0.43□□□□□ -2.34
CCDC50Q8IVM0 SNORD83.1-201ENST00000411362 77 ntBASIC0.43□□□□□ -2.34
CCDC50Q8IVM0 AC092628.1-201ENST00000436250 252 ntBASIC0.43□□□□□ -2.34
CCDC50Q8IVM0 RNU4-57P-201ENST00000515980 135 ntBASIC0.43□□□□□ -2.34
CCDC50Q8IVM0 SNORD58B-201ENST00000607313 66 ntBASIC0.43□□□□□ -2.34
CCDC50Q8IVM0 AL132765.2-201ENST00000610812 351 ntBASIC0.43□□□□□ -2.34
CCDC50Q8IVM0 RNU4-80P-201ENST00000363200 141 ntBASIC0.42□□□□□ -2.34
CCDC50Q8IVM0 Y_RNA.537-201ENST00000384626 109 ntBASIC0.42□□□□□ -2.34
CCDC50Q8IVM0 Y_RNA.551-201ENST00000384661 102 ntBASIC0.42□□□□□ -2.34
CCDC50Q8IVM0 MIR499A-201ENST00000384903 122 ntBASIC0.42□□□□□ -2.34
CCDC50Q8IVM0 RNA5SP247-201ENST00000411181 105 ntBASIC0.42□□□□□ -2.34
CCDC50Q8IVM0 AC090844.1-201ENST00000422019 156 ntBASIC0.42□□□□□ -2.34
CCDC50Q8IVM0 AC024067.1-201ENST00000426199 223 ntBASIC0.42□□□□□ -2.34
CCDC50Q8IVM0 SNORD11-201ENST00000459124 84 ntBASIC0.42□□□□□ -2.34
CCDC50Q8IVM0 Y_RNA.632-201ENST00000459189 102 ntBASIC0.42□□□□□ -2.34
CCDC50Q8IVM0 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.42□□□□□ -2.34
CCDC50Q8IVM0 AL080274.1-201ENST00000605565 220 ntBASIC0.42□□□□□ -2.34
CCDC50Q8IVM0 RMST_2.1-201ENST00000617263 136 ntBASIC0.42□□□□□ -2.34
CCDC50Q8IVM0 AC099654.14-201ENST00000638599 341 ntBASIC0.42□□□□□ -2.34
CCDC50Q8IVM0 Y_RNA.383-201ENST00000383855 97 ntBASIC0.41□□□□□ -2.34
CCDC50Q8IVM0 Y_RNA.384-201ENST00000383909 102 ntBASIC0.41□□□□□ -2.34
CCDC50Q8IVM0 Y_RNA.505-201ENST00000384489 102 ntBASIC0.41□□□□□ -2.34
CCDC50Q8IVM0 SNORA26.5-201ENST00000391215 123 ntBASIC0.41□□□□□ -2.34
CCDC50Q8IVM0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.41□□□□□ -2.34
CCDC50Q8IVM0 MTCO2P12-201ENST00000427426 682 ntBASIC0.41□□□□□ -2.34
CCDC50Q8IVM0 RBMX2P4-201ENST00000441256 376 ntBASIC0.41□□□□□ -2.34
CCDC50Q8IVM0 SNORA68.3-201ENST00000515906 83 ntBASIC0.41□□□□□ -2.34
CCDC50Q8IVM0 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.41□□□□□ -2.34
CCDC50Q8IVM0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.41□□□□□ -2.34
CCDC50Q8IVM0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.41□□□□□ -2.34
CCDC50Q8IVM0 AC005357.1-201ENST00000588399 301 ntBASIC0.41□□□□□ -2.34
CCDC50Q8IVM0 AC006441.5-201ENST00000612680 209 ntBASIC0.41□□□□□ -2.34
CCDC50Q8IVM0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.41□□□□□ -2.34
CCDC50Q8IVM0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.4□□□□□ -2.34
CCDC50Q8IVM0 Y_RNA.187-201ENST00000363918 113 ntBASIC0.4□□□□□ -2.35
CCDC50Q8IVM0 RNU6-934P-201ENST00000365154 107 ntBASIC0.4□□□□□ -2.35
CCDC50Q8IVM0 RNU6-580P-201ENST00000365159 107 ntBASIC0.4□□□□□ -2.35
CCDC50Q8IVM0 SNORA72.4-201ENST00000384174 132 ntBASIC0.4□□□□□ -2.35
CCDC50Q8IVM0 Y_RNA.494-201ENST00000384432 111 ntBASIC0.4□□□□□ -2.35
CCDC50Q8IVM0 RNU6-21P-201ENST00000384710 107 ntBASIC0.4□□□□□ -2.35
CCDC50Q8IVM0 MIR520F-201ENST00000384824 87 ntBASIC0.4□□□□□ -2.35
CCDC50Q8IVM0 MIR520H-201ENST00000385126 88 ntBASIC0.4□□□□□ -2.35
CCDC50Q8IVM0 RNU6-130P-201ENST00000411112 103 ntBASIC0.4□□□□□ -2.35
CCDC50Q8IVM0 RNU6-177P-201ENST00000411257 104 ntBASIC0.4□□□□□ -2.35
CCDC50Q8IVM0 AL160004.2-201ENST00000432935 350 ntBASIC0.4□□□□□ -2.35
CCDC50Q8IVM0 RNU2-13P-201ENST00000515909 113 ntBASIC0.4□□□□□ -2.35
CCDC50Q8IVM0 AL512605.2-201ENST00000592972 256 ntBASIC0.4□□□□□ -2.35
CCDC50Q8IVM0 RPS29P30-201ENST00000600975 111 ntBASIC0.4□□□□□ -2.35
CCDC50Q8IVM0 AL078603.1-201ENST00000603824 313 ntBASIC0.4□□□□□ -2.35
CCDC50Q8IVM0 AL121655.1-201ENST00000605811 308 ntBASIC0.4□□□□□ -2.35
CCDC50Q8IVM0 PART1_1.1-201ENST00000611761 217 ntBASIC0.4□□□□□ -2.35
CCDC50Q8IVM0 Y_RNA.5-201ENST00000362334 102 ntBASIC0.39□□□□□ -2.35
CCDC50Q8IVM0 RNU6-674P-201ENST00000363831 107 ntBASIC0.39□□□□□ -2.35
CCDC50Q8IVM0 Y_RNA.439-201ENST00000384119 94 ntBASIC0.39□□□□□ -2.35
CCDC50Q8IVM0 MIR573-201ENST00000384964 99 ntBASIC0.39□□□□□ -2.35
CCDC50Q8IVM0 MIR140-201ENST00000385282 100 ntBASIC0.39□□□□□ -2.35
CCDC50Q8IVM0 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.39□□□□□ -2.35
CCDC50Q8IVM0 RNU7-152P-201ENST00000458982 64 ntBASIC0.39□□□□□ -2.35
CCDC50Q8IVM0 RNU6-1132P-201ENST00000459214 107 ntBASIC0.39□□□□□ -2.35
CCDC50Q8IVM0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.39□□□□□ -2.35
CCDC50Q8IVM0 MIR2681-201ENST00000581814 105 ntBASIC0.39□□□□□ -2.35
CCDC50Q8IVM0 LARP7P1-201ENST00000605576 316 ntBASIC0.39□□□□□ -2.35
CCDC50Q8IVM0 uc_338.6-201ENST00000613544 171 ntBASIC0.39□□□□□ -2.35
CCDC50Q8IVM0 AC243829.3-201ENST00000622177 108 ntBASIC0.39□□□□□ -2.35
CCDC50Q8IVM0 AL606534.2-204ENST00000635008 178 ntBASIC0.39□□□□□ -2.35
CCDC50Q8IVM0 MIR5087-201ENST00000635826 76 ntBASIC0.39□□□□□ -2.35
CCDC50Q8IVM0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.39□□□□□ -2.35
CCDC50Q8IVM0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.38□□□□□ -2.35
CCDC50Q8IVM0 Y_RNA.39-201ENST00000362620 98 ntBASIC0.38□□□□□ -2.35
CCDC50Q8IVM0 SNORD63-201ENST00000384262 68 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 222.6 ms