Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 AC245047.8-201ENST00000456455 284 ntBASIC0.51□□□□□ -2.33
TNFRSF9Q07011 AL117351.2-201ENST00000513571 157 ntBASIC0.51□□□□□ -2.33
TNFRSF9Q07011 RNU7-115P-201ENST00000516433 55 ntBASIC0.51□□□□□ -2.33
TNFRSF9Q07011 RNU6-1046P-201ENST00000516538 107 ntBASIC0.51□□□□□ -2.33
TNFRSF9Q07011 RNU7-116P-201ENST00000516940 62 ntBASIC0.51□□□□□ -2.33
TNFRSF9Q07011 SNORA74.3-201ENST00000517108 154 ntBASIC0.51□□□□□ -2.33
TNFRSF9Q07011 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.51□□□□□ -2.33
TNFRSF9Q07011 AP003357.1-201ENST00000604497 148 ntBASIC0.51□□□□□ -2.33
TNFRSF9Q07011 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.51□□□□□ -2.33
TNFRSF9Q07011 AL138825.1-201ENST00000618587 192 ntBASIC0.51□□□□□ -2.33
TNFRSF9Q07011 MIR6513-201ENST00000621188 64 ntBASIC0.51□□□□□ -2.33
TNFRSF9Q07011 RNU6-1209P-201ENST00000363655 107 ntBASIC0.5□□□□□ -2.33
TNFRSF9Q07011 RNU6-801P-201ENST00000364087 105 ntBASIC0.5□□□□□ -2.33
TNFRSF9Q07011 Y_RNA.203-201ENST00000364106 102 ntBASIC0.5□□□□□ -2.33
TNFRSF9Q07011 Y_RNA.395-201ENST00000383945 109 ntBASIC0.5□□□□□ -2.33
TNFRSF9Q07011 RNU6-21P-201ENST00000384710 107 ntBASIC0.5□□□□□ -2.33
TNFRSF9Q07011 MIR200A-201ENST00000384875 90 ntBASIC0.5□□□□□ -2.33
TNFRSF9Q07011 MIR92A1-201ENST00000385233 78 ntBASIC0.5□□□□□ -2.33
TNFRSF9Q07011 Y_RNA.645-201ENST00000391229 102 ntBASIC0.5□□□□□ -2.33
TNFRSF9Q07011 MIR1302-11-201ENST00000408051 138 ntBASIC0.5□□□□□ -2.33
TNFRSF9Q07011 MIR1302-9-201ENST00000408365 138 ntBASIC0.5□□□□□ -2.33
TNFRSF9Q07011 MIR1302-10-201ENST00000408734 138 ntBASIC0.5□□□□□ -2.33
TNFRSF9Q07011 MIR1278-201ENST00000408753 81 ntBASIC0.5□□□□□ -2.33
TNFRSF9Q07011 MTATP6P23-201ENST00000440153 476 ntBASIC0.5□□□□□ -2.33
TNFRSF9Q07011 U8.19-201ENST00000459095 133 ntBASIC0.5□□□□□ -2.33
TNFRSF9Q07011 RPL23AP54-201ENST00000495129 419 ntBASIC0.5□□□□□ -2.33
TNFRSF9Q07011 AP003716.2-201ENST00000528260 108 ntBASIC0.5□□□□□ -2.33
TNFRSF9Q07011 MIR4764-201ENST00000580680 88 ntBASIC0.5□□□□□ -2.33
TNFRSF9Q07011 RN7SL793P-201ENST00000583259 296 ntBASIC0.5□□□□□ -2.33
TNFRSF9Q07011 MIR1302-2-201ENST00000607096 138 ntBASIC0.5□□□□□ -2.33
TNFRSF9Q07011 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
TNFRSF9Q07011 RNU4-80P-201ENST00000363200 141 ntBASIC0.49□□□□□ -2.33
TNFRSF9Q07011 Y_RNA.148-201ENST00000363557 117 ntBASIC0.49□□□□□ -2.33
TNFRSF9Q07011 Y_RNA.205-201ENST00000364128 113 ntBASIC0.49□□□□□ -2.33
TNFRSF9Q07011 RNU4-50P-201ENST00000364361 141 ntBASIC0.49□□□□□ -2.33
TNFRSF9Q07011 SNORD42.2-201ENST00000365570 69 ntBASIC0.49□□□□□ -2.33
TNFRSF9Q07011 MIR216A-201ENST00000385063 110 ntBASIC0.49□□□□□ -2.33
TNFRSF9Q07011 MT-TD-201ENST00000387419 68 ntBASIC0.49□□□□□ -2.33
TNFRSF9Q07011 MIR1185-1-201ENST00000408598 86 ntBASIC0.49□□□□□ -2.33
TNFRSF9Q07011 RPS3AP1-201ENST00000413190 320 ntBASIC0.49□□□□□ -2.33
TNFRSF9Q07011 RPS26P5-201ENST00000418544 335 ntBASIC0.49□□□□□ -2.33
TNFRSF9Q07011 AC098934.3-201ENST00000430450 190 ntBASIC0.49□□□□□ -2.33
TNFRSF9Q07011 MTND4P19-201ENST00000446659 478 ntBASIC0.49□□□□□ -2.33
TNFRSF9Q07011 RNU7-90P-201ENST00000459216 62 ntBASIC0.49□□□□□ -2.33
TNFRSF9Q07011 RNU7-141P-201ENST00000459304 62 ntBASIC0.49□□□□□ -2.33
TNFRSF9Q07011 SNORD123-201ENST00000459473 70 ntBASIC0.49□□□□□ -2.33
TNFRSF9Q07011 NDUFA4P2-201ENST00000489989 244 ntBASIC0.49□□□□□ -2.33
TNFRSF9Q07011 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.49□□□□□ -2.33
TNFRSF9Q07011 SEPT14P8-201ENST00000508026 178 ntBASIC0.49□□□□□ -2.33
TNFRSF9Q07011 RNA5SP121-201ENST00000516537 101 ntBASIC0.49□□□□□ -2.33
TNFRSF9Q07011 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
TNFRSF9Q07011 AP003484.1-201ENST00000530974 250 ntBASIC0.49□□□□□ -2.33
TNFRSF9Q07011 AC127455.1-201ENST00000565496 145 ntBASIC0.49□□□□□ -2.33
TNFRSF9Q07011 MIR548AR-201ENST00000582191 57 ntBASIC0.49□□□□□ -2.33
TNFRSF9Q07011 MIR6779-201ENST00000617283 64 ntBASIC0.49□□□□□ -2.33
TNFRSF9Q07011 MIR548AY-201ENST00000617669 107 ntBASIC0.49□□□□□ -2.33
TNFRSF9Q07011 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.49□□□□□ -2.33
TNFRSF9Q07011 Y_RNA.330-201ENST00000365230 109 ntBASIC0.48□□□□□ -2.33
TNFRSF9Q07011 Y_RNA.424-201ENST00000384063 103 ntBASIC0.48□□□□□ -2.33
TNFRSF9Q07011 RNU6-110P-201ENST00000384508 104 ntBASIC0.48□□□□□ -2.33
TNFRSF9Q07011 Y_RNA.526-201ENST00000384572 110 ntBASIC0.48□□□□□ -2.33
TNFRSF9Q07011 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.48□□□□□ -2.33
TNFRSF9Q07011 SNORA36B-201ENST00000410438 131 ntBASIC0.48□□□□□ -2.33
TNFRSF9Q07011 AC024067.1-201ENST00000426199 223 ntBASIC0.48□□□□□ -2.33
TNFRSF9Q07011 SNRPGP14-201ENST00000435400 219 ntBASIC0.48□□□□□ -2.33
TNFRSF9Q07011 POLR2KP2-201ENST00000438155 177 ntBASIC0.48□□□□□ -2.33
TNFRSF9Q07011 RNU6-1170P-201ENST00000515974 106 ntBASIC0.48□□□□□ -2.33
TNFRSF9Q07011 RNU6-475P-201ENST00000516073 104 ntBASIC0.48□□□□□ -2.33
TNFRSF9Q07011 RNU6-397P-201ENST00000516226 104 ntBASIC0.48□□□□□ -2.33
TNFRSF9Q07011 Y_RNA.713-201ENST00000517013 96 ntBASIC0.48□□□□□ -2.33
TNFRSF9Q07011 Y_RNA.714-201ENST00000517065 90 ntBASIC0.48□□□□□ -2.33
TNFRSF9Q07011 AC124312.5-201ENST00000604451 268 ntBASIC0.48□□□□□ -2.33
TNFRSF9Q07011 SNORD113-5-201ENST00000607261 78 ntBASIC0.48□□□□□ -2.33
TNFRSF9Q07011 JPX_2.1-201ENST00000614161 69 ntBASIC0.48□□□□□ -2.33
TNFRSF9Q07011 AC090971.5-201ENST00000621102 293 ntBASIC0.48□□□□□ -2.33
TNFRSF9Q07011 AC134026.1-201ENST00000623249 2239 ntBASIC0.48□□□□□ -2.33
TNFRSF9Q07011 MTND4P29-201ENST00000503122 1372 ntBASIC0.47□□□□□ -2.33
TNFRSF9Q07011 MIR103A2-201ENST00000362154 78 ntBASIC0.47□□□□□ -2.33
TNFRSF9Q07011 RNA5SP347-201ENST00000362445 119 ntBASIC0.47□□□□□ -2.33
TNFRSF9Q07011 SNORD113-8-201ENST00000363497 74 ntBASIC0.47□□□□□ -2.33
TNFRSF9Q07011 RNA5SP325-201ENST00000363756 130 ntBASIC0.47□□□□□ -2.33
TNFRSF9Q07011 SNORD14E-201ENST00000364009 85 ntBASIC0.47□□□□□ -2.33
TNFRSF9Q07011 Y_RNA.222-201ENST00000364264 102 ntBASIC0.47□□□□□ -2.33
TNFRSF9Q07011 Y_RNA.418-201ENST00000384029 102 ntBASIC0.47□□□□□ -2.33
TNFRSF9Q07011 RNU6-474P-201ENST00000384243 107 ntBASIC0.47□□□□□ -2.33
TNFRSF9Q07011 SNORD28B-201ENST00000390993 75 ntBASIC0.47□□□□□ -2.33
TNFRSF9Q07011 RNU6-823P-201ENST00000391042 103 ntBASIC0.47□□□□□ -2.33
TNFRSF9Q07011 SNORA26.5-201ENST00000391215 123 ntBASIC0.47□□□□□ -2.33
TNFRSF9Q07011 MIR942-201ENST00000401111 86 ntBASIC0.47□□□□□ -2.33
TNFRSF9Q07011 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.47□□□□□ -2.33
TNFRSF9Q07011 PMCHL1-202ENST00000423102 261 ntBASIC0.47□□□□□ -2.33
TNFRSF9Q07011 HMGN2P32-201ENST00000444648 269 ntBASIC0.47□□□□□ -2.33
TNFRSF9Q07011 COX6CP6-201ENST00000490840 228 ntBASIC0.47□□□□□ -2.33
TNFRSF9Q07011 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.47□□□□□ -2.33
TNFRSF9Q07011 RN7SKP164-201ENST00000516138 266 ntBASIC0.47□□□□□ -2.33
TNFRSF9Q07011 RNU6-191P-201ENST00000516295 94 ntBASIC0.47□□□□□ -2.33
TNFRSF9Q07011 RNU7-43P-201ENST00000516554 64 ntBASIC0.47□□□□□ -2.33
TNFRSF9Q07011 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.47□□□□□ -2.33
TNFRSF9Q07011 RPL23AP91-201ENST00000569211 455 ntBASIC0.47□□□□□ -2.33
TNFRSF9Q07011 AC023827.1-201ENST00000569247 97 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 270.1 ms