Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MIR5188-201ENST00000583467 113 ntBASIC0.15□□□□□ -2.39
RFC3P40938 AC008507.4-201ENST00000585464 127 ntBASIC0.15□□□□□ -2.39
RFC3P40938 uc_338.4-201ENST00000616635 176 ntBASIC0.15□□□□□ -2.39
RFC3P40938 AL669831.3-213ENST00000636676 183 ntBASIC0.15□□□□□ -2.39
RFC3P40938 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.15□□□□□ -2.39
RFC3P40938 MIR103A1-201ENST00000362165 78 ntBASIC0.14□□□□□ -2.39
RFC3P40938 RNU6-1209P-201ENST00000363655 107 ntBASIC0.14□□□□□ -2.39
RFC3P40938 Y_RNA.341-201ENST00000365341 102 ntBASIC0.14□□□□□ -2.39
RFC3P40938 RNU6-125P-201ENST00000384505 107 ntBASIC0.14□□□□□ -2.39
RFC3P40938 RNU6-847P-201ENST00000411115 108 ntBASIC0.14□□□□□ -2.39
RFC3P40938 RNU6-1213P-201ENST00000517075 94 ntBASIC0.14□□□□□ -2.39
RFC3P40938 RNU6-264P-201ENST00000517134 104 ntBASIC0.14□□□□□ -2.39
RFC3P40938 RN7SKP295-201ENST00000517264 153 ntBASIC0.14□□□□□ -2.39
RFC3P40938 AC024405.2-202ENST00000532731 184 ntBASIC0.14□□□□□ -2.39
RFC3P40938 MIR4659A-201ENST00000580269 81 ntBASIC0.14□□□□□ -2.39
RFC3P40938 LARP7P1-201ENST00000605576 316 ntBASIC0.14□□□□□ -2.39
RFC3P40938 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.14□□□□□ -2.39
RFC3P40938 Y_RNA.3-201ENST00000362331 103 ntBASIC0.13□□□□□ -2.39
RFC3P40938 MIR518A1-201ENST00000385068 85 ntBASIC0.13□□□□□ -2.39
RFC3P40938 SNRPGP12-201ENST00000449481 213 ntBASIC0.13□□□□□ -2.39
RFC3P40938 RNU7-56P-201ENST00000458744 62 ntBASIC0.13□□□□□ -2.39
RFC3P40938 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.13□□□□□ -2.39
RFC3P40938 AC022523.2-201ENST00000561045 150 ntBASIC0.13□□□□□ -2.39
RFC3P40938 AC127455.1-201ENST00000565496 145 ntBASIC0.13□□□□□ -2.39
RFC3P40938 MIR4431-201ENST00000579990 94 ntBASIC0.13□□□□□ -2.39
RFC3P40938 MIR4676-201ENST00000583078 72 ntBASIC0.13□□□□□ -2.39
RFC3P40938 AC006441.5-201ENST00000612680 209 ntBASIC0.13□□□□□ -2.39
RFC3P40938 Y_RNA.436-201ENST00000384097 102 ntBASIC0.12□□□□□ -2.39
RFC3P40938 Y_RNA.516-201ENST00000384541 124 ntBASIC0.12□□□□□ -2.39
RFC3P40938 MIR1277-201ENST00000408536 78 ntBASIC0.12□□□□□ -2.39
RFC3P40938 SNORA40.8-201ENST00000411034 126 ntBASIC0.12□□□□□ -2.39
RFC3P40938 AC015818.7-201ENST00000428754 109 ntBASIC0.12□□□□□ -2.39
RFC3P40938 AC087499.7-201ENST00000441958 109 ntBASIC0.12□□□□□ -2.39
RFC3P40938 AC005042.3-201ENST00000453230 174 ntBASIC0.12□□□□□ -2.39
RFC3P40938 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.12□□□□□ -2.39
RFC3P40938 RPL23AP54-201ENST00000495129 419 ntBASIC0.12□□□□□ -2.39
RFC3P40938 RNU6-470P-201ENST00000515954 104 ntBASIC0.12□□□□□ -2.39
RFC3P40938 RNU6-120P-201ENST00000516077 103 ntBASIC0.12□□□□□ -2.39
RFC3P40938 SNORA25.12-201ENST00000516202 82 ntBASIC0.12□□□□□ -2.39
RFC3P40938 RNU7-115P-201ENST00000516433 55 ntBASIC0.12□□□□□ -2.39
RFC3P40938 AP003327.1-201ENST00000529684 127 ntBASIC0.12□□□□□ -2.39
RFC3P40938 MIR2681-201ENST00000581814 105 ntBASIC0.12□□□□□ -2.39
RFC3P40938 AC011476.5-201ENST00000615594 130 ntBASIC0.12□□□□□ -2.39
RFC3P40938 AC002553.4-201ENST00000616896 331 ntBASIC0.12□□□□□ -2.39
RFC3P40938 Y_RNA.85-201ENST00000363014 111 ntBASIC0.11□□□□□ -2.39
RFC3P40938 RNU6-623P-201ENST00000363143 105 ntBASIC0.11□□□□□ -2.39
RFC3P40938 Y_RNA.242-201ENST00000364473 110 ntBASIC0.11□□□□□ -2.39
RFC3P40938 RNU6-1175P-201ENST00000365200 107 ntBASIC0.11□□□□□ -2.39
RFC3P40938 Y_RNA.570-201ENST00000384750 101 ntBASIC0.11□□□□□ -2.39
RFC3P40938 RNA5SP63-201ENST00000391225 112 ntBASIC0.11□□□□□ -2.39
RFC3P40938 SNORA75.6-201ENST00000391318 127 ntBASIC0.11□□□□□ -2.39
RFC3P40938 RNA5SP127-201ENST00000411051 133 ntBASIC0.11□□□□□ -2.39
RFC3P40938 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.11□□□□□ -2.39
RFC3P40938 AC091951.2-201ENST00000500762 203 ntBASIC0.11□□□□□ -2.39
RFC3P40938 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
RFC3P40938 AC020891.4-201ENST00000605745 93 ntBASIC0.11□□□□□ -2.39
RFC3P40938 RNA5SP517-201ENST00000364724 117 ntBASIC0.1□□□□□ -2.39
RFC3P40938 U8.7-201ENST00000364940 136 ntBASIC0.1□□□□□ -2.39
RFC3P40938 RNU6-679P-201ENST00000391003 106 ntBASIC0.1□□□□□ -2.39
RFC3P40938 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
RFC3P40938 AL590004.1-201ENST00000405321 300 ntBASIC0.1□□□□□ -2.39
RFC3P40938 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
RFC3P40938 SNORD100-201ENST00000408573 76 ntBASIC0.1□□□□□ -2.39
RFC3P40938 SNORD71-201ENST00000411292 86 ntBASIC0.1□□□□□ -2.39
RFC3P40938 AF228730.4-201ENST00000421457 183 ntBASIC0.1□□□□□ -2.39
RFC3P40938 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.1□□□□□ -2.39
RFC3P40938 snoU13.16-201ENST00000459350 104 ntBASIC0.1□□□□□ -2.39
RFC3P40938 RNU6-911P-201ENST00000516523 104 ntBASIC0.1□□□□□ -2.39
RFC3P40938 RNU6-1007P-201ENST00000516586 107 ntBASIC0.1□□□□□ -2.39
RFC3P40938 TPTEP1-208ENST00000636884 213 ntBASIC0.1□□□□□ -2.39
RFC3P40938 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.39
RFC3P40938 RNA5SP62-201ENST00000363457 110 ntBASIC0.09□□□□□ -2.4
RFC3P40938 Y_RNA.374-201ENST00000365606 101 ntBASIC0.09□□□□□ -2.4
RFC3P40938 MIR938-201ENST00000401216 83 ntBASIC0.09□□□□□ -2.4
RFC3P40938 Y_RNA.605-201ENST00000410577 105 ntBASIC0.09□□□□□ -2.4
RFC3P40938 AC024067.1-201ENST00000426199 223 ntBASIC0.09□□□□□ -2.4
RFC3P40938 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.09□□□□□ -2.4
RFC3P40938 RNU7-169P-201ENST00000459456 61 ntBASIC0.09□□□□□ -2.4
RFC3P40938 MIR4423-201ENST00000580922 80 ntBASIC0.09□□□□□ -2.4
RFC3P40938 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.09□□□□□ -2.4
RFC3P40938 AC080013.6-201ENST00000606185 215 ntBASIC0.09□□□□□ -2.4
RFC3P40938 MIR548AY-201ENST00000617669 107 ntBASIC0.09□□□□□ -2.4
RFC3P40938 AC078938.1-201ENST00000620993 318 ntBASIC0.09□□□□□ -2.4
RFC3P40938 Y_RNA.27-201ENST00000362540 103 ntBASIC0.08□□□□□ -2.4
RFC3P40938 RNA5SP257-201ENST00000363023 116 ntBASIC0.08□□□□□ -2.4
RFC3P40938 SNORA63C-201ENST00000364578 129 ntBASIC0.08□□□□□ -2.4
RFC3P40938 AL603910.2-201ENST00000407268 136 ntBASIC0.08□□□□□ -2.4
RFC3P40938 Y_RNA.646-201ENST00000410980 101 ntBASIC0.08□□□□□ -2.4
RFC3P40938 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.08□□□□□ -2.4
RFC3P40938 AC016907.1-201ENST00000419483 435 ntBASIC0.08□□□□□ -2.4
RFC3P40938 BTF3P11-201ENST00000426582 477 ntBASIC0.08□□□□□ -2.4
RFC3P40938 RNU7-62P-201ENST00000458856 62 ntBASIC0.08□□□□□ -2.4
RFC3P40938 RNU7-30P-201ENST00000516835 62 ntBASIC0.08□□□□□ -2.4
RFC3P40938 RNA5SP94-201ENST00000516917 108 ntBASIC0.08□□□□□ -2.4
RFC3P40938 U2.1-201ENST00000618978 145 ntBASIC0.08□□□□□ -2.4
RFC3P40938 uc_338.16-201ENST00000621804 95 ntBASIC0.08□□□□□ -2.4
RFC3P40938 U6.92-201ENST00000636464 89 ntBASIC0.08□□□□□ -2.4
RFC3P40938 SNORD118-201ENST00000363593 134 ntBASIC0.07□□□□□ -2.4
RFC3P40938 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
RFC3P40938 SNORA24-201ENST00000384096 131 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 218.9 ms