Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.55□□□□□ -2.32
SCN4AP35499 RNU6-101P-201ENST00000410323 104 ntBASIC0.55□□□□□ -2.32
SCN4AP35499 AP003716.2-201ENST00000528260 108 ntBASIC0.55□□□□□ -2.32
SCN4AP35499 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.55□□□□□ -2.32
SCN4AP35499 Y_RNA.772-201ENST00000606692 102 ntBASIC0.55□□□□□ -2.32
SCN4AP35499 uc_338.22-201ENST00000622722 187 ntBASIC0.55□□□□□ -2.32
SCN4AP35499 AC112487.2-201ENST00000637950 304 ntBASIC0.55□□□□□ -2.32
SCN4AP35499 MIR6759-201ENST00000638110 65 ntBASIC0.55□□□□□ -2.32
SCN4AP35499 RNU6-674P-201ENST00000363831 107 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 RNY3P11-201ENST00000364153 102 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 Y_RNA.252-201ENST00000364556 101 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 Y_RNA.424-201ENST00000384063 103 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 RNU6-890P-201ENST00000384121 107 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 SNORA2B-201ENST00000384583 137 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.54□□□□□ -2.32
SCN4AP35499 AC104332.1-201ENST00000440471 797 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 CHEK2P4-201ENST00000450340 246 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 RN7SKP164-201ENST00000516138 266 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 MIR2681-201ENST00000581814 105 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 UBE2V2P2-201ENST00000587677 504 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 SNORD113-5-201ENST00000607261 78 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 AC006441.5-201ENST00000612680 209 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 AC022140.2-201ENST00000623500 188 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 Y_RNA.253-201ENST00000364562 112 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 MIR559-201ENST00000385188 96 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 MIR628-201ENST00000385229 95 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 RNA5SP299-201ENST00000391203 116 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 MIR873-201ENST00000401120 77 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 RNU7-21P-201ENST00000459430 62 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 AC082651.2-201ENST00000496833 166 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 AC113410.1-201ENST00000505029 247 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 MTND3P22-201ENST00000510932 243 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 RNU6-155P-201ENST00000516347 100 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 RNU6-764P-201ENST00000516396 105 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 MIR4778-201ENST00000577635 80 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 MIR4514-201ENST00000581410 57 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 AL121655.1-201ENST00000605811 308 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 AL391903.3-201ENST00000612158 163 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 AC013791.1-201ENST00000616619 62 ntBASIC0.54□□□□□ -2.32
SCN4AP35499 Y_RNA.5-201ENST00000362334 102 ntBASIC0.53□□□□□ -2.32
SCN4AP35499 SNORD14.1-201ENST00000365609 90 ntBASIC0.53□□□□□ -2.32
SCN4AP35499 RNU6-144P-201ENST00000383951 107 ntBASIC0.53□□□□□ -2.32
SCN4AP35499 MT-TN-201ENST00000387400 73 ntBASIC0.53□□□□□ -2.32
SCN4AP35499 Y_RNA.645-201ENST00000391229 102 ntBASIC0.53□□□□□ -2.32
SCN4AP35499 MIR1278-201ENST00000408753 81 ntBASIC0.53□□□□□ -2.32
SCN4AP35499 AC024067.1-201ENST00000426199 223 ntBASIC0.53□□□□□ -2.32
SCN4AP35499 POLR2KP2-201ENST00000438155 177 ntBASIC0.53□□□□□ -2.32
SCN4AP35499 AC023449.1-201ENST00000454464 154 ntBASIC0.53□□□□□ -2.32
SCN4AP35499 snoU13.21-201ENST00000459368 105 ntBASIC0.53□□□□□ -2.32
SCN4AP35499 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.53□□□□□ -2.32
SCN4AP35499 SNORA20.3-201ENST00000516880 132 ntBASIC0.53□□□□□ -2.32
SCN4AP35499 SNORA74.3-201ENST00000517108 154 ntBASIC0.53□□□□□ -2.32
SCN4AP35499 AP003327.1-201ENST00000529684 127 ntBASIC0.53□□□□□ -2.32
SCN4AP35499 AC092447.9-201ENST00000603395 144 ntBASIC0.53□□□□□ -2.32
SCN4AP35499 AC011476.5-201ENST00000615594 130 ntBASIC0.53□□□□□ -2.32
SCN4AP35499 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.53□□□□□ -2.32
SCN4AP35499 Y_RNA.315-201ENST00000365117 102 ntBASIC0.52□□□□□ -2.33
SCN4AP35499 RNU6-1323P-201ENST00000384025 107 ntBASIC0.52□□□□□ -2.33
SCN4AP35499 U8.17-201ENST00000391292 132 ntBASIC0.52□□□□□ -2.33
SCN4AP35499 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.52□□□□□ -2.33
SCN4AP35499 FABP5P4-201ENST00000437203 171 ntBASIC0.52□□□□□ -2.33
SCN4AP35499 SEPT14P8-201ENST00000508026 178 ntBASIC0.52□□□□□ -2.33
SCN4AP35499 RNU6-966P-201ENST00000516479 104 ntBASIC0.52□□□□□ -2.33
SCN4AP35499 MIR4801-201ENST00000582704 82 ntBASIC0.52□□□□□ -2.33
SCN4AP35499 AL080274.1-201ENST00000605565 220 ntBASIC0.52□□□□□ -2.33
SCN4AP35499 MIR6079-201ENST00000635807 62 ntBASIC0.52□□□□□ -2.33
SCN4AP35499 SNORD81.1-201ENST00000363064 77 ntBASIC0.52□□□□□ -2.33
SCN4AP35499 RNA5SP264-201ENST00000363115 107 ntBASIC0.52□□□□□ -2.33
SCN4AP35499 U8.7-201ENST00000364940 136 ntBASIC0.52□□□□□ -2.33
SCN4AP35499 SNORA50A-201ENST00000384225 134 ntBASIC0.52□□□□□ -2.33
SCN4AP35499 RNU6-1237P-201ENST00000384777 107 ntBASIC0.52□□□□□ -2.33
SCN4AP35499 MIR452-201ENST00000385020 85 ntBASIC0.52□□□□□ -2.33
SCN4AP35499 MIR1302-7-201ENST00000408841 72 ntBASIC0.52□□□□□ -2.33
SCN4AP35499 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.52□□□□□ -2.33
SCN4AP35499 PSMC1P5-201ENST00000512850 177 ntBASIC0.52□□□□□ -2.33
SCN4AP35499 RNU6-507P-201ENST00000516045 100 ntBASIC0.52□□□□□ -2.33
SCN4AP35499 SNORD45.4-201ENST00000516629 73 ntBASIC0.52□□□□□ -2.33
SCN4AP35499 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.52□□□□□ -2.33
SCN4AP35499 SNORA63.7-201ENST00000365579 123 ntBASIC0.51□□□□□ -2.33
SCN4AP35499 Y_RNA.518-201ENST00000384552 113 ntBASIC0.51□□□□□ -2.33
SCN4AP35499 RNU4-30P-201ENST00000410245 143 ntBASIC0.51□□□□□ -2.33
SCN4AP35499 Y_RNA.592-201ENST00000410274 109 ntBASIC0.51□□□□□ -2.33
SCN4AP35499 SNRPGP10-201ENST00000432323 225 ntBASIC0.51□□□□□ -2.33
SCN4AP35499 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.51□□□□□ -2.33
SCN4AP35499 RNU7-141P-201ENST00000459304 62 ntBASIC0.51□□□□□ -2.33
SCN4AP35499 RNU6-437P-201ENST00000459408 95 ntBASIC0.51□□□□□ -2.33
SCN4AP35499 SNORD124-201ENST00000459577 104 ntBASIC0.51□□□□□ -2.33
SCN4AP35499 RNU7-41P-201ENST00000515917 61 ntBASIC0.51□□□□□ -2.33
SCN4AP35499 SCARNA8-201ENST00000515924 131 ntBASIC0.51□□□□□ -2.33
SCN4AP35499 AC040926.1-201ENST00000530195 238 ntBASIC0.51□□□□□ -2.33
SCN4AP35499 AC024405.2-202ENST00000532731 184 ntBASIC0.51□□□□□ -2.33
SCN4AP35499 AC019288.1-201ENST00000557918 224 ntBASIC0.51□□□□□ -2.33
SCN4AP35499 AL096861.1-201ENST00000610899 123 ntBASIC0.51□□□□□ -2.33
SCN4AP35499 AC007485.1-201ENST00000616755 206 ntBASIC0.51□□□□□ -2.33
SCN4AP35499 7SK.10-201ENST00000621414 298 ntBASIC0.51□□□□□ -2.33
SCN4AP35499 AC068647.2-201ENST00000637380 353 ntBASIC0.51□□□□□ -2.33
SCN4AP35499 SNORA75.2-201ENST00000391138 150 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 SNORA75.3-201ENST00000391231 150 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 MCFD2P1-201ENST00000417812 300 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 205.5 ms