Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 AL442644.1-201ENST00000454390 3105 ntBASIC1.61□□□□□ -2.15
ITM2AO43736 Y_RNA.23-201ENST00000362496 106 ntBASIC1.61□□□□□ -2.15
ITM2AO43736 Y_RNA.91-201ENST00000363042 107 ntBASIC1.61□□□□□ -2.15
ITM2AO43736 Y_RNA.180-201ENST00000363867 113 ntBASIC1.61□□□□□ -2.15
ITM2AO43736 Y_RNA.270-201ENST00000364693 104 ntBASIC1.61□□□□□ -2.15
ITM2AO43736 MIR15B-201ENST00000385045 98 ntBASIC1.61□□□□□ -2.15
ITM2AO43736 SNORA40.18-201ENST00000391200 128 ntBASIC1.61□□□□□ -2.15
ITM2AO43736 RNU4-43P-201ENST00000410628 137 ntBASIC1.61□□□□□ -2.15
ITM2AO43736 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.61□□□□□ -2.15
ITM2AO43736 SEPT7P4-201ENST00000437076 306 ntBASIC1.61□□□□□ -2.15
ITM2AO43736 PGBD4P5-201ENST00000445958 426 ntBASIC1.61□□□□□ -2.15
ITM2AO43736 RPL23AP6-201ENST00000446637 472 ntBASIC1.61□□□□□ -2.15
ITM2AO43736 AL121914.1-201ENST00000450188 156 ntBASIC1.61□□□□□ -2.15
ITM2AO43736 AC093850.1-201ENST00000454121 251 ntBASIC1.61□□□□□ -2.15
ITM2AO43736 Y_RNA.662-201ENST00000516028 97 ntBASIC1.61□□□□□ -2.15
ITM2AO43736 SNORA77B-201ENST00000578179 125 ntBASIC1.61□□□□□ -2.15
ITM2AO43736 Pinc.1-201ENST00000616452 154 ntBASIC1.61□□□□□ -2.15
ITM2AO43736 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
ITM2AO43736 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
ITM2AO43736 MIR424-201ENST00000362227 98 ntBASIC1.6□□□□□ -2.15
ITM2AO43736 RNU6-312P-201ENST00000364629 107 ntBASIC1.6□□□□□ -2.15
ITM2AO43736 Y_RNA.441-201ENST00000384123 112 ntBASIC1.6□□□□□ -2.15
ITM2AO43736 RNU6-997P-201ENST00000384725 107 ntBASIC1.6□□□□□ -2.15
ITM2AO43736 RNU6-1135P-201ENST00000411083 103 ntBASIC1.6□□□□□ -2.15
ITM2AO43736 RNU2-55P-201ENST00000411146 174 ntBASIC1.6□□□□□ -2.15
ITM2AO43736 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.6□□□□□ -2.15
ITM2AO43736 RNA5SP182-201ENST00000516064 82 ntBASIC1.6□□□□□ -2.15
ITM2AO43736 AC087685.1-201ENST00000587507 141 ntBASIC1.6□□□□□ -2.15
ITM2AO43736 AL627230.6-201ENST00000611129 280 ntBASIC1.6□□□□□ -2.15
ITM2AO43736 AL513423.1-201ENST00000621695 132 ntBASIC1.6□□□□□ -2.15
ITM2AO43736 AC084768.2-201ENST00000622736 221 ntBASIC1.6□□□□□ -2.15
ITM2AO43736 AC027279.3-201ENST00000625055 122 ntBASIC1.6□□□□□ -2.15
ITM2AO43736 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.6□□□□□ -2.15
ITM2AO43736 RNU6-661P-201ENST00000362409 107 ntBASIC1.59□□□□□ -2.15
ITM2AO43736 RNU6-728P-201ENST00000365375 104 ntBASIC1.59□□□□□ -2.15
ITM2AO43736 RNU6-209P-201ENST00000384118 107 ntBASIC1.59□□□□□ -2.15
ITM2AO43736 MIR660-201ENST00000385235 97 ntBASIC1.59□□□□□ -2.15
ITM2AO43736 JTBP1-201ENST00000441314 247 ntBASIC1.59□□□□□ -2.15
ITM2AO43736 CYCTP-201ENST00000504253 315 ntBASIC1.59□□□□□ -2.15
ITM2AO43736 MIR4778-201ENST00000577635 80 ntBASIC1.59□□□□□ -2.15
ITM2AO43736 MIR4431-201ENST00000579990 94 ntBASIC1.59□□□□□ -2.15
ITM2AO43736 MIR8081-201ENST00000611533 95 ntBASIC1.59□□□□□ -2.15
ITM2AO43736 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.58□□□□□ -2.16
ITM2AO43736 RNU6-1084P-201ENST00000362498 107 ntBASIC1.58□□□□□ -2.16
ITM2AO43736 Y_RNA.66-201ENST00000362862 102 ntBASIC1.58□□□□□ -2.16
ITM2AO43736 RNU6-833P-201ENST00000363486 107 ntBASIC1.58□□□□□ -2.16
ITM2AO43736 RNU6-268P-201ENST00000364174 107 ntBASIC1.58□□□□□ -2.16
ITM2AO43736 Y_RNA.634-201ENST00000364811 113 ntBASIC1.58□□□□□ -2.16
ITM2AO43736 snoU2-30.1-201ENST00000365012 70 ntBASIC1.58□□□□□ -2.16
ITM2AO43736 Y_RNA.432-201ENST00000384087 111 ntBASIC1.58□□□□□ -2.16
ITM2AO43736 RNU6-163P-201ENST00000384396 106 ntBASIC1.58□□□□□ -2.16
ITM2AO43736 RNU6-394P-201ENST00000410735 107 ntBASIC1.58□□□□□ -2.16
ITM2AO43736 AC004965.1-201ENST00000413033 213 ntBASIC1.58□□□□□ -2.16
ITM2AO43736 AC023449.1-201ENST00000454464 154 ntBASIC1.58□□□□□ -2.16
ITM2AO43736 RPL23AP42-201ENST00000471152 471 ntBASIC1.58□□□□□ -2.16
ITM2AO43736 RNU7-12P-201ENST00000516030 62 ntBASIC1.58□□□□□ -2.16
ITM2AO43736 Y_RNA.666-201ENST00000516187 112 ntBASIC1.58□□□□□ -2.16
ITM2AO43736 RNU6-1299P-201ENST00000516316 100 ntBASIC1.58□□□□□ -2.16
ITM2AO43736 MIR4648-201ENST00000580107 72 ntBASIC1.58□□□□□ -2.16
ITM2AO43736 AC097639.2-201ENST00000603159 172 ntBASIC1.58□□□□□ -2.16
ITM2AO43736 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.58□□□□□ -2.16
ITM2AO43736 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.58□□□□□ -2.16
ITM2AO43736 RNU6-457P-201ENST00000363999 107 ntBASIC1.57□□□□□ -2.16
ITM2AO43736 RNU4-84P-201ENST00000364200 139 ntBASIC1.57□□□□□ -2.16
ITM2AO43736 RNU6-643P-201ENST00000384018 107 ntBASIC1.57□□□□□ -2.16
ITM2AO43736 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
ITM2AO43736 RNA5SP508-201ENST00000411327 119 ntBASIC1.57□□□□□ -2.16
ITM2AO43736 RPL30P13-201ENST00000418873 348 ntBASIC1.57□□□□□ -2.16
ITM2AO43736 RNA5SP153-201ENST00000516498 76 ntBASIC1.57□□□□□ -2.16
ITM2AO43736 RNU6-197P-201ENST00000516680 100 ntBASIC1.57□□□□□ -2.16
ITM2AO43736 Y_RNA.714-201ENST00000517065 90 ntBASIC1.57□□□□□ -2.16
ITM2AO43736 AC007751.1-201ENST00000529260 376 ntBASIC1.57□□□□□ -2.16
ITM2AO43736 AL160236.1-201ENST00000556317 195 ntBASIC1.57□□□□□ -2.16
ITM2AO43736 AC104465.1-201ENST00000611365 139 ntBASIC1.57□□□□□ -2.16
ITM2AO43736 AC006441.5-201ENST00000612680 209 ntBASIC1.57□□□□□ -2.16
ITM2AO43736 SNORD3E-202ENST00000627253 216 ntBASIC1.57□□□□□ -2.16
ITM2AO43736 SNORD14E-201ENST00000364009 85 ntBASIC1.56□□□□□ -2.16
ITM2AO43736 MIR526A1-201ENST00000384897 85 ntBASIC1.56□□□□□ -2.16
ITM2AO43736 MIR548A2-201ENST00000384956 97 ntBASIC1.56□□□□□ -2.16
ITM2AO43736 MIR891A-201ENST00000401237 79 ntBASIC1.56□□□□□ -2.16
ITM2AO43736 HMGN2P23-201ENST00000456759 269 ntBASIC1.56□□□□□ -2.16
ITM2AO43736 AC005908.1-201ENST00000468701 347 ntBASIC1.56□□□□□ -2.16
ITM2AO43736 RNU6-250P-201ENST00000516958 103 ntBASIC1.56□□□□□ -2.16
ITM2AO43736 SUMO2P16-201ENST00000519475 264 ntBASIC1.56□□□□□ -2.16
ITM2AO43736 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
ITM2AO43736 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
ITM2AO43736 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
ITM2AO43736 RNU6-1123P-201ENST00000362347 106 ntBASIC1.55□□□□□ -2.16
ITM2AO43736 RNU6-414P-201ENST00000363705 104 ntBASIC1.55□□□□□ -2.16
ITM2AO43736 RNU6-978P-201ENST00000364371 103 ntBASIC1.55□□□□□ -2.16
ITM2AO43736 RNU6-818P-201ENST00000364837 108 ntBASIC1.55□□□□□ -2.16
ITM2AO43736 Y_RNA.336-201ENST00000365307 109 ntBASIC1.55□□□□□ -2.16
ITM2AO43736 SNORD61-201ENST00000384252 73 ntBASIC1.55□□□□□ -2.16
ITM2AO43736 RNU6-804P-201ENST00000384286 107 ntBASIC1.55□□□□□ -2.16
ITM2AO43736 MIR320A-201ENST00000385302 82 ntBASIC1.55□□□□□ -2.16
ITM2AO43736 RNU7-121P-201ENST00000516604 62 ntBASIC1.55□□□□□ -2.16
ITM2AO43736 RNU6-255P-201ENST00000516957 105 ntBASIC1.55□□□□□ -2.16
ITM2AO43736 AC015688.6-201ENST00000577737 104 ntBASIC1.55□□□□□ -2.16
ITM2AO43736 MIR4662B-201ENST00000579498 81 ntBASIC1.55□□□□□ -2.16
ITM2AO43736 MIR8074-201ENST00000615081 81 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 216 ms