Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.59□□□□□ -2
PAX4O43316 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
PAX4O43316 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
PAX4O43316 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
PAX4O43316 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
PAX4O43316 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
PAX4O43316 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.58□□□□□ -2
PAX4O43316 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PAX4O43316 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.58□□□□□ -2
PAX4O43316 RNU6-1079P-201ENST00000362861 110 ntBASIC2.58□□□□□ -2
PAX4O43316 RNU6-811P-201ENST00000384069 107 ntBASIC2.58□□□□□ -2
PAX4O43316 MIR554-201ENST00000384874 96 ntBASIC2.58□□□□□ -2
PAX4O43316 RNU6ATAC-201ENST00000408749 126 ntBASIC2.58□□□□□ -2
PAX4O43316 RNU6-1086P-201ENST00000410930 100 ntBASIC2.58□□□□□ -2
PAX4O43316 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.58□□□□□ -2
PAX4O43316 TRIAP1P1-201ENST00000427062 225 ntBASIC2.58□□□□□ -2
PAX4O43316 CST9LP2-201ENST00000437612 320 ntBASIC2.58□□□□□ -2
PAX4O43316 AC245047.7-201ENST00000440265 293 ntBASIC2.58□□□□□ -2
PAX4O43316 RNU7-48P-201ENST00000458875 63 ntBASIC2.58□□□□□ -2
PAX4O43316 AP002884.2-201ENST00000471647 395 ntBASIC2.58□□□□□ -2
PAX4O43316 AC026402.1-201ENST00000513642 170 ntBASIC2.58□□□□□ -2
PAX4O43316 RNU6-75P-201ENST00000515944 104 ntBASIC2.58□□□□□ -2
PAX4O43316 RNU6-991P-201ENST00000516168 107 ntBASIC2.58□□□□□ -2
PAX4O43316 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.58□□□□□ -2
PAX4O43316 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.58□□□□□ -2
PAX4O43316 MIR4764-201ENST00000580680 88 ntBASIC2.58□□□□□ -2
PAX4O43316 MIR5195-201ENST00000583555 115 ntBASIC2.58□□□□□ -2
PAX4O43316 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.58□□□□□ -2
PAX4O43316 AL020996.3-201ENST00000606617 222 ntBASIC2.58□□□□□ -2
PAX4O43316 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.58□□□□□ -2
PAX4O43316 RNVU1-4-201ENST00000612985 164 ntBASIC2.58□□□□□ -2
PAX4O43316 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.58□□□□□ -2
PAX4O43316 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PAX4O43316 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PAX4O43316 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
PAX4O43316 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PAX4O43316 Y_RNA.36-201ENST00000362602 112 ntBASIC2.57□□□□□ -2
PAX4O43316 AL359837.1-201ENST00000381357 287 ntBASIC2.57□□□□□ -2
PAX4O43316 AC084357.1-201ENST00000473404 255 ntBASIC2.57□□□□□ -2
PAX4O43316 AL163195.1-201ENST00000496941 348 ntBASIC2.57□□□□□ -2
PAX4O43316 AC234781.5-201ENST00000508429 271 ntBASIC2.57□□□□□ -2
PAX4O43316 SNORA4.4-201ENST00000515921 135 ntBASIC2.57□□□□□ -2
PAX4O43316 RNU7-79P-201ENST00000516082 62 ntBASIC2.57□□□□□ -2
PAX4O43316 Y_RNA.722-201ENST00000517279 114 ntBASIC2.57□□□□□ -2
PAX4O43316 MIR3064-201ENST00000581130 66 ntBASIC2.57□□□□□ -2
PAX4O43316 MIR3609-201ENST00000582661 80 ntBASIC2.57□□□□□ -2
PAX4O43316 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PAX4O43316 AC093010.3-201ENST00000570269 15214 ntBASIC2.57□□□□□ -2
PAX4O43316 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.57□□□□□ -2
PAX4O43316 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.57□□□□□ -2
PAX4O43316 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.56□□□□□ -2
PAX4O43316 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.56□□□□□ -2
PAX4O43316 MIRLET7C-201ENST00000362160 84 ntBASIC2.56□□□□□ -2
PAX4O43316 RNU6-936P-201ENST00000384005 107 ntBASIC2.56□□□□□ -2
PAX4O43316 AL035423.1-201ENST00000420331 213 ntBASIC2.56□□□□□ -2
PAX4O43316 AC006989.1-201ENST00000427212 131 ntBASIC2.56□□□□□ -2
PAX4O43316 AC015818.7-201ENST00000428754 109 ntBASIC2.56□□□□□ -2
PAX4O43316 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.56□□□□□ -2
PAX4O43316 AL512598.1-201ENST00000610158 273 ntBASIC2.56□□□□□ -2
PAX4O43316 MIR8066-201ENST00000617280 78 ntBASIC2.56□□□□□ -2
PAX4O43316 CTSLP2-204ENST00000629029 392 ntBASIC2.56□□□□□ -2
PAX4O43316 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.56□□□□□ -2
PAX4O43316 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
PAX4O43316 AC007336.1-201ENST00000576365 3828 ntBASIC2.56□□□□□ -2
PAX4O43316 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PAX4O43316 MFSD8-233ENST00000641482 4860 ntBASIC2.56□□□□□ -2
PAX4O43316 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PAX4O43316 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.55□□□□□ -2
PAX4O43316 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
PAX4O43316 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.55□□□□□ -2
PAX4O43316 SNORD115-3-201ENST00000363100 82 ntBASIC2.55□□□□□ -2
PAX4O43316 SNORD115-22-201ENST00000364456 82 ntBASIC2.55□□□□□ -2
PAX4O43316 SNORA8-201ENST00000384574 139 ntBASIC2.55□□□□□ -2
PAX4O43316 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.55□□□□□ -2
PAX4O43316 SNORD28B-201ENST00000390993 75 ntBASIC2.55□□□□□ -2
PAX4O43316 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC2.55□□□□□ -2
PAX4O43316 MIR942-201ENST00000401111 86 ntBASIC2.55□□□□□ -2
PAX4O43316 AC123900.1-201ENST00000420390 96 ntBASIC2.55□□□□□ -2
PAX4O43316 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PAX4O43316 AC015922.2-201ENST00000435593 184 ntBASIC2.55□□□□□ -2
PAX4O43316 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.55□□□□□ -2
PAX4O43316 RNU7-67P-201ENST00000459003 62 ntBASIC2.55□□□□□ -2
PAX4O43316 AC023790.1-201ENST00000482174 347 ntBASIC2.55□□□□□ -2
PAX4O43316 AC018868.1-201ENST00000491307 315 ntBASIC2.55□□□□□ -2
PAX4O43316 RNU2-27P-201ENST00000516185 142 ntBASIC2.55□□□□□ -2
PAX4O43316 RNU1-142P-201ENST00000516682 145 ntBASIC2.55□□□□□ -2
PAX4O43316 RNU1-45P-201ENST00000517191 141 ntBASIC2.55□□□□□ -2
PAX4O43316 AC023632.4-201ENST00000517783 191 ntBASIC2.55□□□□□ -2
PAX4O43316 AC104996.3-201ENST00000590718 94 ntBASIC2.55□□□□□ -2
PAX4O43316 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.55□□□□□ -2
PAX4O43316 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.55□□□□□ -2
PAX4O43316 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PAX4O43316 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.55□□□□□ -2
PAX4O43316 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC2.55□□□□□ -2
PAX4O43316 MIRLET7F1-201ENST00000362202 87 ntBASIC2.54□□□□□ -2
PAX4O43316 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.54□□□□□ -2
PAX4O43316 HSPE1P24-201ENST00000450782 238 ntBASIC2.54□□□□□ -2
PAX4O43316 SNORD105B-201ENST00000458770 79 ntBASIC2.54□□□□□ -2
PAX4O43316 Y_RNA.648-201ENST00000459455 110 ntBASIC2.54□□□□□ -2
PAX4O43316 AC006483.1-201ENST00000487308 313 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 217.7 ms