Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 Y_RNA.357-201ENST00000365487 109 ntBASIC1.99□□□□□ -2.09
FOXN3O00409 RNU6-203P-201ENST00000384038 104 ntBASIC1.99□□□□□ -2.09
FOXN3O00409 SNORA19-201ENST00000384737 128 ntBASIC1.99□□□□□ -2.09
FOXN3O00409 MIR616-201ENST00000385293 97 ntBASIC1.99□□□□□ -2.09
FOXN3O00409 AC006461.1-201ENST00000412637 326 ntBASIC1.99□□□□□ -2.09
FOXN3O00409 AL121914.1-201ENST00000450188 156 ntBASIC1.99□□□□□ -2.09
FOXN3O00409 RNU6-237P-201ENST00000515985 71 ntBASIC1.99□□□□□ -2.09
FOXN3O00409 RNA5SP272-201ENST00000516095 111 ntBASIC1.99□□□□□ -2.09
FOXN3O00409 MIR4769-201ENST00000584126 77 ntBASIC1.99□□□□□ -2.09
FOXN3O00409 SNORA28-201ENST00000606769 126 ntBASIC1.99□□□□□ -2.09
FOXN3O00409 AC021506.2-201ENST00000612354 169 ntBASIC1.99□□□□□ -2.09
FOXN3O00409 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.99□□□□□ -2.09
FOXN3O00409 MIR3658-201ENST00000636291 56 ntBASIC1.99□□□□□ -2.09
FOXN3O00409 U2.22-201ENST00000636441 106 ntBASIC1.99□□□□□ -2.09
FOXN3O00409 AC092881.1-201ENST00000638218 2733 ntBASIC1.99□□□□□ -2.09
FOXN3O00409 AL157777.2-201ENST00000258070 137 ntBASIC1.98□□□□□ -2.09
FOXN3O00409 Y_RNA.23-201ENST00000362496 106 ntBASIC1.98□□□□□ -2.09
FOXN3O00409 SNORA16.1-201ENST00000364597 132 ntBASIC1.98□□□□□ -2.09
FOXN3O00409 MIR15B-201ENST00000385045 98 ntBASIC1.98□□□□□ -2.09
FOXN3O00409 MIR1289-2-201ENST00000408360 111 ntBASIC1.98□□□□□ -2.09
FOXN3O00409 CYCSP49-201ENST00000420810 319 ntBASIC1.98□□□□□ -2.09
FOXN3O00409 AC003989.2-201ENST00000440224 169 ntBASIC1.98□□□□□ -2.09
FOXN3O00409 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.98□□□□□ -2.09
FOXN3O00409 RN7SL274P-201ENST00000492268 272 ntBASIC1.98□□□□□ -2.09
FOXN3O00409 AC103810.8-201ENST00000607347 118 ntBASIC1.98□□□□□ -2.09
FOXN3O00409 MIR8074-201ENST00000615081 81 ntBASIC1.98□□□□□ -2.09
FOXN3O00409 AC095038.3-201ENST00000634439 195 ntBASIC1.98□□□□□ -2.09
FOXN3O00409 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
FOXN3O00409 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
FOXN3O00409 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
FOXN3O00409 RNU6-661P-201ENST00000362409 107 ntBASIC1.97□□□□□ -2.09
FOXN3O00409 RNU6-103P-201ENST00000363686 107 ntBASIC1.97□□□□□ -2.09
FOXN3O00409 RNU6-674P-201ENST00000363831 107 ntBASIC1.97□□□□□ -2.09
FOXN3O00409 RNU6-151P-201ENST00000364158 107 ntBASIC1.97□□□□□ -2.09
FOXN3O00409 RNU4-84P-201ENST00000364200 139 ntBASIC1.97□□□□□ -2.09
FOXN3O00409 Y_RNA.441-201ENST00000384123 112 ntBASIC1.97□□□□□ -2.09
FOXN3O00409 Y_RNA.587-201ENST00000391210 103 ntBASIC1.97□□□□□ -2.09
FOXN3O00409 FTH1P12-201ENST00000432137 551 ntBASIC1.97□□□□□ -2.09
FOXN3O00409 HMGN2P23-201ENST00000456759 269 ntBASIC1.97□□□□□ -2.09
FOXN3O00409 SNORD116-25-201ENST00000516517 92 ntBASIC1.97□□□□□ -2.09
FOXN3O00409 RNU7-28P-201ENST00000516759 62 ntBASIC1.97□□□□□ -2.09
FOXN3O00409 RPL23AP91-201ENST00000569211 455 ntBASIC1.97□□□□□ -2.09
FOXN3O00409 MIR5688-201ENST00000580619 83 ntBASIC1.97□□□□□ -2.09
FOXN3O00409 MIR126-201ENST00000362291 85 ntBASIC1.96□□□□□ -2.1
FOXN3O00409 RNU6-312P-201ENST00000364629 107 ntBASIC1.96□□□□□ -2.1
FOXN3O00409 RNU6-449P-201ENST00000383914 107 ntBASIC1.96□□□□□ -2.1
FOXN3O00409 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.96□□□□□ -2.1
FOXN3O00409 CALM2P4-201ENST00000430810 426 ntBASIC1.96□□□□□ -2.1
FOXN3O00409 AC005908.1-201ENST00000468701 347 ntBASIC1.96□□□□□ -2.1
FOXN3O00409 RPS29P11-201ENST00000496507 171 ntBASIC1.96□□□□□ -2.1
FOXN3O00409 MIR3910-1-201ENST00000580936 111 ntBASIC1.96□□□□□ -2.1
FOXN3O00409 AL391903.3-201ENST00000612158 163 ntBASIC1.96□□□□□ -2.1
FOXN3O00409 AL591926.4-201ENST00000616895 298 ntBASIC1.96□□□□□ -2.1
FOXN3O00409 MIR8063-201ENST00000621930 81 ntBASIC1.96□□□□□ -2.1
FOXN3O00409 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.96□□□□□ -2.1
FOXN3O00409 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
FOXN3O00409 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
FOXN3O00409 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
FOXN3O00409 MIR764-201ENST00000390811 85 ntBASIC1.95□□□□□ -2.1
FOXN3O00409 SNORA12.1-201ENST00000390873 148 ntBASIC1.95□□□□□ -2.1
FOXN3O00409 RNU6-1228P-201ENST00000391014 107 ntBASIC1.95□□□□□ -2.1
FOXN3O00409 RNA5SP482-201ENST00000391269 118 ntBASIC1.95□□□□□ -2.1
FOXN3O00409 AC019129.1-201ENST00000403786 261 ntBASIC1.95□□□□□ -2.1
FOXN3O00409 AL445685.2-201ENST00000422551 342 ntBASIC1.95□□□□□ -2.1
FOXN3O00409 JTBP1-201ENST00000441314 247 ntBASIC1.95□□□□□ -2.1
FOXN3O00409 AC008834.1-201ENST00000511612 175 ntBASIC1.95□□□□□ -2.1
FOXN3O00409 MIR4419B-201ENST00000577260 68 ntBASIC1.95□□□□□ -2.1
FOXN3O00409 MIR4778-201ENST00000577635 80 ntBASIC1.95□□□□□ -2.1
FOXN3O00409 MIR4431-201ENST00000579990 94 ntBASIC1.95□□□□□ -2.1
FOXN3O00409 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.95□□□□□ -2.1
FOXN3O00409 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
FOXN3O00409 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.94□□□□□ -2.1
FOXN3O00409 SNORD45.3-201ENST00000363836 72 ntBASIC1.94□□□□□ -2.1
FOXN3O00409 Y_RNA.203-201ENST00000364106 102 ntBASIC1.94□□□□□ -2.1
FOXN3O00409 Y_RNA.253-201ENST00000364562 112 ntBASIC1.94□□□□□ -2.1
FOXN3O00409 AC099513.1-201ENST00000490423 301 ntBASIC1.94□□□□□ -2.1
FOXN3O00409 AC107027.2-201ENST00000512197 115 ntBASIC1.94□□□□□ -2.1
FOXN3O00409 RNU6-1116P-201ENST00000517269 99 ntBASIC1.94□□□□□ -2.1
FOXN3O00409 JPX_2.1-201ENST00000614161 69 ntBASIC1.94□□□□□ -2.1
FOXN3O00409 SNORD3E-202ENST00000627253 216 ntBASIC1.94□□□□□ -2.1
FOXN3O00409 MIR424-201ENST00000362227 98 ntBASIC1.93□□□□□ -2.1
FOXN3O00409 SNORD114-1-201ENST00000362705 72 ntBASIC1.93□□□□□ -2.1
FOXN3O00409 RNU4-11P-201ENST00000365287 132 ntBASIC1.93□□□□□ -2.1
FOXN3O00409 RNU6-728P-201ENST00000365375 104 ntBASIC1.93□□□□□ -2.1
FOXN3O00409 RNA5SP259-201ENST00000365541 109 ntBASIC1.93□□□□□ -2.1
FOXN3O00409 RNU6-643P-201ENST00000384018 107 ntBASIC1.93□□□□□ -2.1
FOXN3O00409 SNORA20-201ENST00000384662 132 ntBASIC1.93□□□□□ -2.1
FOXN3O00409 MIR9-3-201ENST00000385084 90 ntBASIC1.93□□□□□ -2.1
FOXN3O00409 MIR30A-201ENST00000385092 71 ntBASIC1.93□□□□□ -2.1
FOXN3O00409 RNU6-239P-201ENST00000390990 99 ntBASIC1.93□□□□□ -2.1
FOXN3O00409 SNRPGP10-201ENST00000432323 225 ntBASIC1.93□□□□□ -2.1
FOXN3O00409 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.93□□□□□ -2.1
FOXN3O00409 PGBD4P5-201ENST00000445958 426 ntBASIC1.93□□□□□ -2.1
FOXN3O00409 OR9P1P-201ENST00000496431 281 ntBASIC1.93□□□□□ -2.1
FOXN3O00409 SNORA25.12-201ENST00000516202 82 ntBASIC1.93□□□□□ -2.1
FOXN3O00409 RNA5SP168-201ENST00000516642 112 ntBASIC1.93□□□□□ -2.1
FOXN3O00409 SNORA44.1-201ENST00000517031 108 ntBASIC1.93□□□□□ -2.1
FOXN3O00409 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.93□□□□□ -2.1
FOXN3O00409 SUMO2P16-201ENST00000519475 264 ntBASIC1.93□□□□□ -2.1
FOXN3O00409 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 200.1 ms