Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RNU4-28P-201ENST00000364739 141 ntBASIC-1.64□□□□□ -2.67
SCN11AQ9UI33 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.64□□□□□ -2.67
SCN11AQ9UI33 AC018865.2-201ENST00000423631 129 ntBASIC-1.64□□□□□ -2.67
SCN11AQ9UI33 AP000676.1-201ENST00000533307 52 ntBASIC-1.64□□□□□ -2.67
SCN11AQ9UI33 MIR7844-201ENST00000616161 122 ntBASIC-1.64□□□□□ -2.67
SCN11AQ9UI33 AC069503.3-201ENST00000618674 145 ntBASIC-1.64□□□□□ -2.67
SCN11AQ9UI33 RNU6-462P-201ENST00000362659 105 ntBASIC-1.64□□□□□ -2.67
SCN11AQ9UI33 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.64□□□□□ -2.67
SCN11AQ9UI33 RNU6-827P-201ENST00000365553 106 ntBASIC-1.64□□□□□ -2.67
SCN11AQ9UI33 RNU6-708P-201ENST00000384217 107 ntBASIC-1.64□□□□□ -2.67
SCN11AQ9UI33 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.64□□□□□ -2.67
SCN11AQ9UI33 MTCO2P27-201ENST00000420740 428 ntBASIC-1.64□□□□□ -2.67
SCN11AQ9UI33 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-1.64□□□□□ -2.67
SCN11AQ9UI33 RNU6-201P-201ENST00000517100 61 ntBASIC-1.64□□□□□ -2.67
SCN11AQ9UI33 MTND2P32-201ENST00000521584 1038 ntBASIC-1.64□□□□□ -2.67
SCN11AQ9UI33 AC107934.1-201ENST00000522215 217 ntBASIC-1.64□□□□□ -2.67
SCN11AQ9UI33 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-1.64□□□□□ -2.67
SCN11AQ9UI33 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-1.64□□□□□ -2.67
SCN11AQ9UI33 RNU6-136P-201ENST00000384663 107 ntBASIC-1.65□□□□□ -2.67
SCN11AQ9UI33 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.65□□□□□ -2.67
SCN11AQ9UI33 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-1.65□□□□□ -2.67
SCN11AQ9UI33 SNRPGP14-201ENST00000435400 219 ntBASIC-1.65□□□□□ -2.67
SCN11AQ9UI33 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.65□□□□□ -2.67
SCN11AQ9UI33 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.65□□□□□ -2.67
SCN11AQ9UI33 RNU6-958P-201ENST00000516995 106 ntBASIC-1.65□□□□□ -2.67
SCN11AQ9UI33 RNU6-621P-201ENST00000364752 109 ntBASIC-1.66□□□□□ -2.68
SCN11AQ9UI33 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.66□□□□□ -2.68
SCN11AQ9UI33 USP9YP30-201ENST00000430729 455 ntBASIC-1.66□□□□□ -2.68
SCN11AQ9UI33 MTCO2P3-201ENST00000442543 421 ntBASIC-1.66□□□□□ -2.68
SCN11AQ9UI33 RNU7-74P-201ENST00000459104 62 ntBASIC-1.66□□□□□ -2.68
SCN11AQ9UI33 AL158050.2-201ENST00000605336 568 ntBASIC-1.66□□□□□ -2.68
SCN11AQ9UI33 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.67□□□□□ -2.68
SCN11AQ9UI33 RNU6-280P-201ENST00000364145 104 ntBASIC-1.67□□□□□ -2.68
SCN11AQ9UI33 MIR539-201ENST00000365690 78 ntBASIC-1.67□□□□□ -2.68
SCN11AQ9UI33 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.67□□□□□ -2.68
SCN11AQ9UI33 MIR548K-201ENST00000408406 116 ntBASIC-1.67□□□□□ -2.68
SCN11AQ9UI33 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.67□□□□□ -2.68
SCN11AQ9UI33 AL512286.1-201ENST00000439244 400 ntBASIC-1.67□□□□□ -2.68
SCN11AQ9UI33 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.67□□□□□ -2.68
SCN11AQ9UI33 RNU7-67P-201ENST00000459003 62 ntBASIC-1.67□□□□□ -2.68
SCN11AQ9UI33 RNU6-479P-201ENST00000516348 105 ntBASIC-1.67□□□□□ -2.68
SCN11AQ9UI33 MTND1P35-201ENST00000526739 508 ntBASIC-1.67□□□□□ -2.68
SCN11AQ9UI33 MIR5708-201ENST00000579723 85 ntBASIC-1.67□□□□□ -2.68
SCN11AQ9UI33 AC245014.2-201ENST00000603689 287 ntBASIC-1.67□□□□□ -2.68
SCN11AQ9UI33 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.67□□□□□ -2.68
SCN11AQ9UI33 RNU6-227P-201ENST00000362865 103 ntBASIC-1.67□□□□□ -2.68
SCN11AQ9UI33 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.67□□□□□ -2.68
SCN11AQ9UI33 MIR527-201ENST00000385244 85 ntBASIC-1.67□□□□□ -2.68
SCN11AQ9UI33 RNA5SP475-201ENST00000410568 110 ntBASIC-1.67□□□□□ -2.68
SCN11AQ9UI33 AC022028.1-201ENST00000412054 408 ntBASIC-1.67□□□□□ -2.68
SCN11AQ9UI33 AC098614.3-201ENST00000438957 440 ntBASIC-1.67□□□□□ -2.68
SCN11AQ9UI33 SNORD18.2-201ENST00000459604 70 ntBASIC-1.67□□□□□ -2.68
SCN11AQ9UI33 MTND4LP25-201ENST00000570218 163 ntBASIC-1.67□□□□□ -2.68
SCN11AQ9UI33 BNIP3P39-201ENST00000601077 554 ntBASIC-1.67□□□□□ -2.68
SCN11AQ9UI33 AC011373.1-201ENST00000607270 237 ntBASIC-1.67□□□□□ -2.68
SCN11AQ9UI33 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.68□□□□□ -2.68
SCN11AQ9UI33 AP003733.2-201ENST00000529409 171 ntBASIC-1.68□□□□□ -2.68
SCN11AQ9UI33 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.68□□□□□ -2.68
SCN11AQ9UI33 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.68□□□□□ -2.68
SCN11AQ9UI33 MIR3941-201ENST00000582572 103 ntBASIC-1.68□□□□□ -2.68
SCN11AQ9UI33 AC068880.4-201ENST00000623082 495 ntBASIC-1.68□□□□□ -2.68
SCN11AQ9UI33 AP002371.2-201ENST00000624450 503 ntBASIC-1.68□□□□□ -2.68
SCN11AQ9UI33 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.69□□□□□ -2.68
SCN11AQ9UI33 Y_RNA.311-201ENST00000365068 96 ntBASIC-1.69□□□□□ -2.68
SCN11AQ9UI33 SNORA24.1-201ENST00000384401 135 ntBASIC-1.69□□□□□ -2.68
SCN11AQ9UI33 MTATP6P18-201ENST00000417994 673 ntBASIC-1.69□□□□□ -2.68
SCN11AQ9UI33 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-1.69□□□□□ -2.68
SCN11AQ9UI33 AL117351.1-201ENST00000438864 766 ntBASIC-1.69□□□□□ -2.68
SCN11AQ9UI33 SNORA25.17-201ENST00000517184 124 ntBASIC-1.69□□□□□ -2.68
SCN11AQ9UI33 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.69□□□□□ -2.68
SCN11AQ9UI33 AL442663.2-201ENST00000554385 511 ntBASIC-1.69□□□□□ -2.68
SCN11AQ9UI33 TUSC7.1-201ENST00000610969 165 ntBASIC-1.69□□□□□ -2.68
SCN11AQ9UI33 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.69□□□□□ -2.68
SCN11AQ9UI33 RNU4-75P-201ENST00000364621 146 ntBASIC-1.7□□□□□ -2.68
SCN11AQ9UI33 RNU6-541P-201ENST00000384709 110 ntBASIC-1.7□□□□□ -2.68
SCN11AQ9UI33 AL603914.1-201ENST00000401964 204 ntBASIC-1.7□□□□□ -2.68
SCN11AQ9UI33 AC096949.1-201ENST00000412047 152 ntBASIC-1.7□□□□□ -2.68
SCN11AQ9UI33 AL008987.1-201ENST00000415528 237 ntBASIC-1.7□□□□□ -2.68
SCN11AQ9UI33 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.7□□□□□ -2.68
SCN11AQ9UI33 SNORA25.10-201ENST00000515926 124 ntBASIC-1.7□□□□□ -2.68
SCN11AQ9UI33 RNU6-685P-201ENST00000517088 95 ntBASIC-1.7□□□□□ -2.68
SCN11AQ9UI33 MTND1P24-201ENST00000552175 861 ntBASIC-1.7□□□□□ -2.68
SCN11AQ9UI33 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.7□□□□□ -2.68
SCN11AQ9UI33 AL445984.1-201ENST00000637834 659 ntBASIC-1.7□□□□□ -2.68
SCN11AQ9UI33 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.7□□□□□ -2.68
SCN11AQ9UI33 RNU6-236P-201ENST00000363886 106 ntBASIC-1.7□□□□□ -2.68
SCN11AQ9UI33 RNU1-141P-201ENST00000364623 158 ntBASIC-1.7□□□□□ -2.68
SCN11AQ9UI33 RNU2-29P-201ENST00000410423 189 ntBASIC-1.7□□□□□ -2.68
SCN11AQ9UI33 AC073464.1-201ENST00000429823 534 ntBASIC-1.7□□□□□ -2.68
SCN11AQ9UI33 RNA5SP484-201ENST00000458857 111 ntBASIC-1.7□□□□□ -2.68
SCN11AQ9UI33 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.7□□□□□ -2.68
SCN11AQ9UI33 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.7□□□□□ -2.68
SCN11AQ9UI33 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.7□□□□□ -2.68
SCN11AQ9UI33 AL353803.5-201ENST00000599815 141 ntBASIC-1.7□□□□□ -2.68
SCN11AQ9UI33 AL450270.1-201ENST00000606160 391 ntBASIC-1.7□□□□□ -2.68
SCN11AQ9UI33 RNU6-268P-201ENST00000364174 107 ntBASIC-1.71□□□□□ -2.68
SCN11AQ9UI33 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.71□□□□□ -2.68
SCN11AQ9UI33 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.71□□□□□ -2.68
SCN11AQ9UI33 AL662814.1-201ENST00000617364 121 ntBASIC-1.71□□□□□ -2.68
SCN11AQ9UI33 MIR1246-201ENST00000636535 73 ntBASIC-1.71□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 241.7 ms