Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 MIR30A-201ENST00000385092 71 ntBASIC1.56□□□□□ -2.16
SLC52A3Q9NQ40 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
SLC52A3Q9NQ40 RNU6-918P-201ENST00000391219 106 ntBASIC1.56□□□□□ -2.16
SLC52A3Q9NQ40 RNU6-493P-201ENST00000391321 108 ntBASIC1.56□□□□□ -2.16
SLC52A3Q9NQ40 AC245047.3-201ENST00000429428 127 ntBASIC1.56□□□□□ -2.16
SLC52A3Q9NQ40 HSPE1P9-201ENST00000440046 311 ntBASIC1.56□□□□□ -2.16
SLC52A3Q9NQ40 RPL23AP63-201ENST00000498752 471 ntBASIC1.56□□□□□ -2.16
SLC52A3Q9NQ40 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.56□□□□□ -2.16
SLC52A3Q9NQ40 SNORA31.10-201ENST00000516482 106 ntBASIC1.56□□□□□ -2.16
SLC52A3Q9NQ40 SNORA31.17-201ENST00000516953 127 ntBASIC1.56□□□□□ -2.16
SLC52A3Q9NQ40 AP002004.2-201ENST00000531656 154 ntBASIC1.56□□□□□ -2.16
SLC52A3Q9NQ40 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.56□□□□□ -2.16
SLC52A3Q9NQ40 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
SLC52A3Q9NQ40 Y_RNA.203-201ENST00000364106 102 ntBASIC1.55□□□□□ -2.16
SLC52A3Q9NQ40 SNORA4.2-201ENST00000365313 147 ntBASIC1.55□□□□□ -2.16
SLC52A3Q9NQ40 RNU6-969P-201ENST00000383900 105 ntBASIC1.55□□□□□ -2.16
SLC52A3Q9NQ40 Y_RNA.435-201ENST00000384095 112 ntBASIC1.55□□□□□ -2.16
SLC52A3Q9NQ40 MIR562-201ENST00000384894 95 ntBASIC1.55□□□□□ -2.16
SLC52A3Q9NQ40 RN7SKP101-201ENST00000411376 320 ntBASIC1.55□□□□□ -2.16
SLC52A3Q9NQ40 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.55□□□□□ -2.16
SLC52A3Q9NQ40 RPL31P63-201ENST00000422565 375 ntBASIC1.55□□□□□ -2.16
SLC52A3Q9NQ40 Y_RNA.644-201ENST00000459006 113 ntBASIC1.55□□□□□ -2.16
SLC52A3Q9NQ40 Y_RNA.674-201ENST00000516362 113 ntBASIC1.55□□□□□ -2.16
SLC52A3Q9NQ40 SNORA25.15-201ENST00000516487 89 ntBASIC1.55□□□□□ -2.16
SLC52A3Q9NQ40 RNU6-250P-201ENST00000516958 103 ntBASIC1.55□□□□□ -2.16
SLC52A3Q9NQ40 SNORA81.3-201ENST00000517283 198 ntBASIC1.55□□□□□ -2.16
SLC52A3Q9NQ40 MIR5688-201ENST00000580619 83 ntBASIC1.55□□□□□ -2.16
SLC52A3Q9NQ40 MIR8054-201ENST00000620877 86 ntBASIC1.55□□□□□ -2.16
SLC52A3Q9NQ40 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SLC52A3Q9NQ40 MIR367-201ENST00000362299 68 ntBASIC1.54□□□□□ -2.16
SLC52A3Q9NQ40 Y_RNA.29-201ENST00000362570 113 ntBASIC1.54□□□□□ -2.16
SLC52A3Q9NQ40 RNU1-17P-201ENST00000363022 152 ntBASIC1.54□□□□□ -2.16
SLC52A3Q9NQ40 Y_RNA.140-201ENST00000363474 103 ntBASIC1.54□□□□□ -2.16
SLC52A3Q9NQ40 Y_RNA.796-201ENST00000364268 102 ntBASIC1.54□□□□□ -2.16
SLC52A3Q9NQ40 Y_RNA.253-201ENST00000364562 112 ntBASIC1.54□□□□□ -2.16
SLC52A3Q9NQ40 Y_RNA.799-201ENST00000364992 102 ntBASIC1.54□□□□□ -2.16
SLC52A3Q9NQ40 COX6CP10-201ENST00000416832 224 ntBASIC1.54□□□□□ -2.16
SLC52A3Q9NQ40 AL603825.1-201ENST00000438481 80 ntBASIC1.54□□□□□ -2.16
SLC52A3Q9NQ40 AL138752.1-201ENST00000452964 351 ntBASIC1.54□□□□□ -2.16
SLC52A3Q9NQ40 SCARNA8-201ENST00000515924 131 ntBASIC1.54□□□□□ -2.16
SLC52A3Q9NQ40 RNA5SP481-201ENST00000516814 122 ntBASIC1.54□□□□□ -2.16
SLC52A3Q9NQ40 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.54□□□□□ -2.16
SLC52A3Q9NQ40 MIR4724-201ENST00000579485 89 ntBASIC1.54□□□□□ -2.16
SLC52A3Q9NQ40 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.54□□□□□ -2.16
SLC52A3Q9NQ40 AC084768.2-201ENST00000622736 221 ntBASIC1.54□□□□□ -2.16
SLC52A3Q9NQ40 Y_RNA.24-201ENST00000362508 103 ntBASIC1.53□□□□□ -2.16
SLC52A3Q9NQ40 RNU6-1020P-201ENST00000363684 107 ntBASIC1.53□□□□□ -2.16
SLC52A3Q9NQ40 Y_RNA.229-201ENST00000364347 113 ntBASIC1.53□□□□□ -2.16
SLC52A3Q9NQ40 MIR320A-201ENST00000385302 82 ntBASIC1.53□□□□□ -2.16
SLC52A3Q9NQ40 MT-TR-201ENST00000387439 65 ntBASIC1.53□□□□□ -2.16
SLC52A3Q9NQ40 FTH1P12-201ENST00000432137 551 ntBASIC1.53□□□□□ -2.16
SLC52A3Q9NQ40 AC233266.1-201ENST00000454518 96 ntBASIC1.53□□□□□ -2.16
SLC52A3Q9NQ40 SNORD11-201ENST00000459124 84 ntBASIC1.53□□□□□ -2.16
SLC52A3Q9NQ40 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.53□□□□□ -2.16
SLC52A3Q9NQ40 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.53□□□□□ -2.16
SLC52A3Q9NQ40 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SLC52A3Q9NQ40 AP000942.3-201ENST00000603702 160 ntBASIC1.53□□□□□ -2.16
SLC52A3Q9NQ40 AC242852.1-201ENST00000612151 96 ntBASIC1.53□□□□□ -2.16
SLC52A3Q9NQ40 AC004792.1-201ENST00000614523 137 ntBASIC1.53□□□□□ -2.16
SLC52A3Q9NQ40 MIR8074-201ENST00000615081 81 ntBASIC1.53□□□□□ -2.16
SLC52A3Q9NQ40 AC244015.1-201ENST00000622301 99 ntBASIC1.53□□□□□ -2.16
SLC52A3Q9NQ40 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.53□□□□□ -2.16
SLC52A3Q9NQ40 RNU6-1209P-201ENST00000363655 107 ntBASIC1.52□□□□□ -2.17
SLC52A3Q9NQ40 RNU4-41P-201ENST00000364426 143 ntBASIC1.52□□□□□ -2.17
SLC52A3Q9NQ40 Y_RNA.571-201ENST00000384753 98 ntBASIC1.52□□□□□ -2.17
SLC52A3Q9NQ40 MIR616-201ENST00000385293 97 ntBASIC1.52□□□□□ -2.17
SLC52A3Q9NQ40 RNU6-440P-201ENST00000390882 105 ntBASIC1.52□□□□□ -2.17
SLC52A3Q9NQ40 MIR934-201ENST00000401241 83 ntBASIC1.52□□□□□ -2.17
SLC52A3Q9NQ40 Y_RNA.793-201ENST00000411222 111 ntBASIC1.52□□□□□ -2.17
SLC52A3Q9NQ40 CYCSP49-201ENST00000420810 319 ntBASIC1.52□□□□□ -2.17
SLC52A3Q9NQ40 MTND5P15-201ENST00000434246 349 ntBASIC1.52□□□□□ -2.17
SLC52A3Q9NQ40 RNU7-120P-201ENST00000459334 63 ntBASIC1.52□□□□□ -2.17
SLC52A3Q9NQ40 RN7SKP164-201ENST00000516138 266 ntBASIC1.52□□□□□ -2.17
SLC52A3Q9NQ40 RNU6-453P-201ENST00000516819 85 ntBASIC1.52□□□□□ -2.17
SLC52A3Q9NQ40 RNU2-56P-201ENST00000516826 190 ntBASIC1.52□□□□□ -2.17
SLC52A3Q9NQ40 AC022559.1-201ENST00000520905 205 ntBASIC1.52□□□□□ -2.17
SLC52A3Q9NQ40 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.52□□□□□ -2.17
SLC52A3Q9NQ40 AL391903.3-201ENST00000612158 163 ntBASIC1.52□□□□□ -2.17
SLC52A3Q9NQ40 AL591926.4-201ENST00000616895 298 ntBASIC1.52□□□□□ -2.17
SLC52A3Q9NQ40 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
SLC52A3Q9NQ40 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SLC52A3Q9NQ40 Y_RNA.7-201ENST00000362352 102 ntBASIC1.51□□□□□ -2.17
SLC52A3Q9NQ40 RNU6-414P-201ENST00000363705 104 ntBASIC1.51□□□□□ -2.17
SLC52A3Q9NQ40 RNU6-682P-201ENST00000363843 106 ntBASIC1.51□□□□□ -2.17
SLC52A3Q9NQ40 U8.5-201ENST00000364528 136 ntBASIC1.51□□□□□ -2.17
SLC52A3Q9NQ40 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
SLC52A3Q9NQ40 RNU6-360P-201ENST00000390944 104 ntBASIC1.51□□□□□ -2.17
SLC52A3Q9NQ40 RNU2-7P-201ENST00000410794 178 ntBASIC1.51□□□□□ -2.17
SLC52A3Q9NQ40 Y_RNA.621-201ENST00000411065 96 ntBASIC1.51□□□□□ -2.17
SLC52A3Q9NQ40 Z98949.2-201ENST00000440996 144 ntBASIC1.51□□□□□ -2.17
SLC52A3Q9NQ40 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.51□□□□□ -2.17
SLC52A3Q9NQ40 AL049830.1-201ENST00000468034 425 ntBASIC1.51□□□□□ -2.17
SLC52A3Q9NQ40 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.51□□□□□ -2.17
SLC52A3Q9NQ40 NDUFA4P2-201ENST00000489989 244 ntBASIC1.51□□□□□ -2.17
SLC52A3Q9NQ40 HMGN1P7-201ENST00000491722 313 ntBASIC1.51□□□□□ -2.17
SLC52A3Q9NQ40 OR9P1P-201ENST00000496431 281 ntBASIC1.51□□□□□ -2.17
SLC52A3Q9NQ40 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.51□□□□□ -2.17
SLC52A3Q9NQ40 AP002392.1-201ENST00000537692 208 ntBASIC1.51□□□□□ -2.17
SLC52A3Q9NQ40 MIR3683-201ENST00000580847 82 ntBASIC1.51□□□□□ -2.17
SLC52A3Q9NQ40 MIR4762-201ENST00000585261 75 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 292.1 ms