Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 RNU6-937P-201ENST00000384325 106 ntBASIC0.77□□□□□ -2.29
CDC42EP4Q9H3Q1 Y_RNA.526-201ENST00000384572 110 ntBASIC0.77□□□□□ -2.29
CDC42EP4Q9H3Q1 MIR1302-11-201ENST00000408051 138 ntBASIC0.77□□□□□ -2.29
CDC42EP4Q9H3Q1 MIR1302-9-201ENST00000408365 138 ntBASIC0.77□□□□□ -2.29
CDC42EP4Q9H3Q1 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.77□□□□□ -2.29
CDC42EP4Q9H3Q1 MIR1302-10-201ENST00000408734 138 ntBASIC0.77□□□□□ -2.29
CDC42EP4Q9H3Q1 RPL39P39-201ENST00000455840 151 ntBASIC0.77□□□□□ -2.29
CDC42EP4Q9H3Q1 LINC01399-202ENST00000458450 244 ntBASIC0.77□□□□□ -2.29
CDC42EP4Q9H3Q1 U8.19-201ENST00000459095 133 ntBASIC0.77□□□□□ -2.29
CDC42EP4Q9H3Q1 U8.20-201ENST00000459445 131 ntBASIC0.77□□□□□ -2.29
CDC42EP4Q9H3Q1 HMGN1P10-201ENST00000474557 553 ntBASIC0.77□□□□□ -2.29
CDC42EP4Q9H3Q1 SNORD111.1-201ENST00000516421 86 ntBASIC0.77□□□□□ -2.29
CDC42EP4Q9H3Q1 CYP3A137P-201ENST00000562436 69 ntBASIC0.77□□□□□ -2.29
CDC42EP4Q9H3Q1 MIR3973-201ENST00000579824 107 ntBASIC0.77□□□□□ -2.29
CDC42EP4Q9H3Q1 MIR3192-201ENST00000584920 77 ntBASIC0.77□□□□□ -2.29
CDC42EP4Q9H3Q1 AP003357.1-201ENST00000604497 148 ntBASIC0.77□□□□□ -2.29
CDC42EP4Q9H3Q1 PRELID3BP2-201ENST00000605362 201 ntBASIC0.77□□□□□ -2.29
CDC42EP4Q9H3Q1 MIR1302-2-201ENST00000607096 138 ntBASIC0.77□□□□□ -2.29
CDC42EP4Q9H3Q1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.77□□□□□ -2.29
CDC42EP4Q9H3Q1 Y_RNA.143-201ENST00000363520 106 ntBASIC0.76□□□□□ -2.29
CDC42EP4Q9H3Q1 Y_RNA.509-201ENST00000384506 99 ntBASIC0.76□□□□□ -2.29
CDC42EP4Q9H3Q1 RNU4-30P-201ENST00000410245 143 ntBASIC0.76□□□□□ -2.29
CDC42EP4Q9H3Q1 AC002429.1-201ENST00000437672 148 ntBASIC0.76□□□□□ -2.29
CDC42EP4Q9H3Q1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.76□□□□□ -2.29
CDC42EP4Q9H3Q1 Y_RNA.639-201ENST00000458981 102 ntBASIC0.76□□□□□ -2.29
CDC42EP4Q9H3Q1 SNORD45.4-201ENST00000516629 73 ntBASIC0.76□□□□□ -2.29
CDC42EP4Q9H3Q1 RNU7-110P-201ENST00000516891 62 ntBASIC0.76□□□□□ -2.29
CDC42EP4Q9H3Q1 RNU7-116P-201ENST00000516940 62 ntBASIC0.76□□□□□ -2.29
CDC42EP4Q9H3Q1 Y_RNA.713-201ENST00000517013 96 ntBASIC0.76□□□□□ -2.29
CDC42EP4Q9H3Q1 AC040926.1-201ENST00000530195 238 ntBASIC0.76□□□□□ -2.29
CDC42EP4Q9H3Q1 AC136932.1-201ENST00000574771 208 ntBASIC0.76□□□□□ -2.29
CDC42EP4Q9H3Q1 AL020996.3-201ENST00000606617 222 ntBASIC0.76□□□□□ -2.29
CDC42EP4Q9H3Q1 AL391903.3-201ENST00000612158 163 ntBASIC0.76□□□□□ -2.29
CDC42EP4Q9H3Q1 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.76□□□□□ -2.29
CDC42EP4Q9H3Q1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
CDC42EP4Q9H3Q1 MIR6779-201ENST00000617283 64 ntBASIC0.76□□□□□ -2.29
CDC42EP4Q9H3Q1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CDC42EP4Q9H3Q1 RNU4-50P-201ENST00000364361 141 ntBASIC0.75□□□□□ -2.29
CDC42EP4Q9H3Q1 SNORD50B-201ENST00000364995 70 ntBASIC0.75□□□□□ -2.29
CDC42EP4Q9H3Q1 SNORD14.1-201ENST00000365609 90 ntBASIC0.75□□□□□ -2.29
CDC42EP4Q9H3Q1 RNU6-969P-201ENST00000383900 105 ntBASIC0.75□□□□□ -2.29
CDC42EP4Q9H3Q1 Y_RNA.471-201ENST00000384312 102 ntBASIC0.75□□□□□ -2.29
CDC42EP4Q9H3Q1 AC063976.4-201ENST00000421971 163 ntBASIC0.75□□□□□ -2.29
CDC42EP4Q9H3Q1 SNRPGP10-201ENST00000432323 225 ntBASIC0.75□□□□□ -2.29
CDC42EP4Q9H3Q1 MTND4P19-201ENST00000446659 478 ntBASIC0.75□□□□□ -2.29
CDC42EP4Q9H3Q1 AC245047.8-201ENST00000456455 284 ntBASIC0.75□□□□□ -2.29
CDC42EP4Q9H3Q1 RNU7-115P-201ENST00000516433 55 ntBASIC0.75□□□□□ -2.29
CDC42EP4Q9H3Q1 AC090142.3-201ENST00000519012 385 ntBASIC0.75□□□□□ -2.29
CDC42EP4Q9H3Q1 AC024405.2-202ENST00000532731 184 ntBASIC0.75□□□□□ -2.29
CDC42EP4Q9H3Q1 AP001094.1-201ENST00000579805 193 ntBASIC0.75□□□□□ -2.29
CDC42EP4Q9H3Q1 MIR3145-201ENST00000580727 82 ntBASIC0.75□□□□□ -2.29
CDC42EP4Q9H3Q1 POLR3GP1-201ENST00000594073 261 ntBASIC0.75□□□□□ -2.29
CDC42EP4Q9H3Q1 Y_RNA.286-201ENST00000364813 102 ntBASIC0.74□□□□□ -2.29
CDC42EP4Q9H3Q1 U8.7-201ENST00000364940 136 ntBASIC0.74□□□□□ -2.29
CDC42EP4Q9H3Q1 snoU2-30.1-201ENST00000365012 70 ntBASIC0.74□□□□□ -2.29
CDC42EP4Q9H3Q1 Y_RNA.393-201ENST00000383936 102 ntBASIC0.74□□□□□ -2.29
CDC42EP4Q9H3Q1 Y_RNA.419-201ENST00000384041 102 ntBASIC0.74□□□□□ -2.29
CDC42EP4Q9H3Q1 SNORA80D-201ENST00000384488 135 ntBASIC0.74□□□□□ -2.29
CDC42EP4Q9H3Q1 MIR516B2-201ENST00000385190 85 ntBASIC0.74□□□□□ -2.29
CDC42EP4Q9H3Q1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
CDC42EP4Q9H3Q1 MLLT10P1-201ENST00000418346 262 ntBASIC0.74□□□□□ -2.29
CDC42EP4Q9H3Q1 AC004941.2-201ENST00000427009 228 ntBASIC0.74□□□□□ -2.29
CDC42EP4Q9H3Q1 RNU6-1170P-201ENST00000515974 106 ntBASIC0.74□□□□□ -2.29
CDC42EP4Q9H3Q1 RNA5SP436-201ENST00000516020 115 ntBASIC0.74□□□□□ -2.29
CDC42EP4Q9H3Q1 AP003716.2-201ENST00000528260 108 ntBASIC0.74□□□□□ -2.29
CDC42EP4Q9H3Q1 AC127455.1-201ENST00000565496 145 ntBASIC0.74□□□□□ -2.29
CDC42EP4Q9H3Q1 MIR6866-201ENST00000638146 69 ntBASIC0.74□□□□□ -2.29
CDC42EP4Q9H3Q1 MIR369-201ENST00000362155 70 ntBASIC0.73□□□□□ -2.29
CDC42EP4Q9H3Q1 RNU6-1084P-201ENST00000362498 107 ntBASIC0.73□□□□□ -2.29
CDC42EP4Q9H3Q1 Y_RNA.31-201ENST00000362574 102 ntBASIC0.73□□□□□ -2.29
CDC42EP4Q9H3Q1 Y_RNA.203-201ENST00000364106 102 ntBASIC0.73□□□□□ -2.29
CDC42EP4Q9H3Q1 Y_RNA.222-201ENST00000364264 102 ntBASIC0.73□□□□□ -2.29
CDC42EP4Q9H3Q1 Y_RNA.383-201ENST00000383855 97 ntBASIC0.73□□□□□ -2.29
CDC42EP4Q9H3Q1 MIR136-201ENST00000385207 82 ntBASIC0.73□□□□□ -2.29
CDC42EP4Q9H3Q1 SNORA75.2-201ENST00000391138 150 ntBASIC0.73□□□□□ -2.29
CDC42EP4Q9H3Q1 RNU6-131P-201ENST00000391144 107 ntBASIC0.73□□□□□ -2.29
CDC42EP4Q9H3Q1 Y_RNA.645-201ENST00000391229 102 ntBASIC0.73□□□□□ -2.29
CDC42EP4Q9H3Q1 SNORA75.3-201ENST00000391231 150 ntBASIC0.73□□□□□ -2.29
CDC42EP4Q9H3Q1 PMCHL1-202ENST00000423102 261 ntBASIC0.73□□□□□ -2.29
CDC42EP4Q9H3Q1 AC024067.1-201ENST00000426199 223 ntBASIC0.73□□□□□ -2.29
CDC42EP4Q9H3Q1 MTND5P15-201ENST00000434246 349 ntBASIC0.73□□□□□ -2.29
CDC42EP4Q9H3Q1 HMGN2P32-201ENST00000444648 269 ntBASIC0.73□□□□□ -2.29
CDC42EP4Q9H3Q1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.73□□□□□ -2.29
CDC42EP4Q9H3Q1 RNU7-21P-201ENST00000459430 62 ntBASIC0.73□□□□□ -2.29
CDC42EP4Q9H3Q1 SNORA74.3-201ENST00000517108 154 ntBASIC0.73□□□□□ -2.29
CDC42EP4Q9H3Q1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.73□□□□□ -2.29
CDC42EP4Q9H3Q1 AC108706.1-201ENST00000611053 297 ntBASIC0.73□□□□□ -2.29
CDC42EP4Q9H3Q1 AC106800.4-201ENST00000614905 153 ntBASIC0.73□□□□□ -2.29
CDC42EP4Q9H3Q1 MIR548AY-201ENST00000617669 107 ntBASIC0.73□□□□□ -2.29
CDC42EP4Q9H3Q1 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.72□□□□□ -2.29
CDC42EP4Q9H3Q1 Y_RNA.431-201ENST00000384086 102 ntBASIC0.72□□□□□ -2.29
CDC42EP4Q9H3Q1 RNU6-21P-201ENST00000384710 107 ntBASIC0.72□□□□□ -2.29
CDC42EP4Q9H3Q1 RNU6-308P-201ENST00000390957 107 ntBASIC0.72□□□□□ -2.29
CDC42EP4Q9H3Q1 AC117454.1-201ENST00000491120 168 ntBASIC0.72□□□□□ -2.29
CDC42EP4Q9H3Q1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.72□□□□□ -2.29
CDC42EP4Q9H3Q1 AC136628.3-201ENST00000521868 290 ntBASIC0.72□□□□□ -2.29
CDC42EP4Q9H3Q1 MIR4653-201ENST00000585107 83 ntBASIC0.72□□□□□ -2.29
CDC42EP4Q9H3Q1 C8orf59P2-201ENST00000603441 271 ntBASIC0.72□□□□□ -2.29
CDC42EP4Q9H3Q1 SNORD113-5-201ENST00000607261 78 ntBASIC0.72□□□□□ -2.29
CDC42EP4Q9H3Q1 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms